Gene annotation
Transcriptome id Sobic.001G166300.1
Synonym Sb01g014540
Functional annotation gibberellin 20 oxidase 2, putative, expressed
UniProt C5WSA4
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF98
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G19010 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os03g42130.1 : gibberellin 20 oxidase 2, putative, expressed
MaizeGDB (Corn) Zm00025a007402 , Zm00025a017303
Brachypodium KQK19942 , KQK14161 , KQK14160
Barley HORVU4Hr1G013840.2 , HORVU4Hr1G013840.3 , HORVU4Hr1G013840.1 , HORVU4Hr1G013840.4 , HORVU4Hr1G013840.5
Wheat TraesCS4D02G079900 , TraesCS4B02G081200 , TraesCS4A02G234100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G185201 - -
2 Sobic.004G347200 expressed protein -
3 Sobic.008G065000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thylakoid lumenal 29.8 kDa protein, putative, expressed -
4 Sobic.001G033100 expressed protein -
5 Sobic.002G225400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
6 Sobic.008G064500 TPR domain protein, putative, expressed -
7 Sobic.007G108800 - -
8 Sobic.003G022300 SOUL heme-binding protein, putative, expressed -
9 Sobic.006G084400 OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
10 Sobic.003G375700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G210200 Acid phosphatase/vanadium-dependent haloperoxidase-related protein(PubMedID : 26465154)@Divergent PAP2 family domain containing protein, expressed -
12 Sobic.002G227700 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.002G314300 OsAPRL1 adenosine 5\'-phosphosulfate reductase-like OsAPRL1, expressed K05907: adenylyl-sulfate reductase (glutathione)
14 Sobic.009G206300 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
15 Sobic.003G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein
16 Sobic.010G012400 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
17 Sobic.009G190000 tetratricopeptide repeat domain containing protein, expressed -
18 Sobic.010G259100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized UPF0114 domain containing protein, expressed -
19 Sobic.009G185301 - -
20 Sobic.006G235350 - -


Gene co-expression network
sample Sobic001G166300 Sobic001G166300 Sobic009G185201 Sobic009G185201 Sobic001G166300--Sobic009G185201 Sobic004G347200 Sobic004G347200 Sobic001G166300--Sobic004G347200 Sobic008G065000 Sobic008G065000 Sobic001G166300--Sobic008G065000 Sobic001G033100 Sobic001G033100 Sobic001G166300--Sobic001G033100 Sobic002G225400 Sobic002G225400 Sobic001G166300--Sobic002G225400 Sobic008G064500 Sobic008G064500 Sobic001G166300--Sobic008G064500 Sobic007G108800 Sobic007G108800 Sobic001G166300--Sobic007G108800 Sobic003G022300 Sobic003G022300 Sobic001G166300--Sobic003G022300 Sobic006G084400 Sobic006G084400 Sobic001G166300--Sobic006G084400 Sobic009G185201--Sobic002G225400 Sobic009G185201--Sobic003G022300 Sobic009G185201--Sobic006G084400 Sobic009G206300 Sobic009G206300 Sobic009G185201--Sobic009G206300 Sobic009G185201--Sobic001G033100 Sobic009G185201--Sobic007G108800 Sobic003G131800 Sobic003G131800 Sobic009G185201--Sobic003G131800 Sobic009G210200 Sobic009G210200 Sobic009G185201--Sobic009G210200 Sobic003G042700 Sobic003G042700 Sobic009G185201--Sobic003G042700 Sobic004G347200--Sobic001G166300 Sobic002G109300 Sobic002G109300 Sobic004G347200--Sobic002G109300 Sobic004G347200--Sobic002G225400 Sobic008G065050 Sobic008G065050 Sobic004G347200--Sobic008G065050 Sobic007G069000 Sobic007G069000 Sobic004G347200--Sobic007G069000 Sobic004G347200--Sobic009G206300 Sobic006G177400 Sobic006G177400 Sobic004G347200--Sobic006G177400 Sobic004G347200--Sobic007G108800 Sobic001G374500 Sobic001G374500 Sobic004G347200--Sobic001G374500 Sobic003G370000 Sobic003G370000 Sobic008G065000--Sobic003G370000 Sobic008G061401 Sobic008G061401 Sobic008G065000--Sobic008G061401 Sobic008G065000--Sobic008G064500 Sobic002G047400 Sobic002G047400 Sobic008G065000--Sobic002G047400 Sobic001G289500 Sobic001G289500 Sobic008G065000--Sobic001G289500 Sobic004G028300 Sobic004G028300 Sobic008G065000--Sobic004G028300 Sobic006G235350 Sobic006G235350 Sobic008G065000--Sobic006G235350 Sobic003G005000 Sobic003G005000 Sobic008G065000--Sobic003G005000 Sobic010G181300 Sobic010G181300 Sobic008G065000--Sobic010G181300 Sobic001G033100--Sobic003G022300 Sobic001G033100--Sobic009G210200 Sobic008G015800 Sobic008G015800 Sobic001G033100--Sobic008G015800 Sobic004G020300 Sobic004G020300 Sobic001G033100--Sobic004G020300 Sobic001G222600 Sobic001G222600 Sobic001G033100--Sobic001G222600 Sobic001G033100--Sobic006G084400 Sobic006G067400 Sobic006G067400 Sobic001G033100--Sobic006G067400 Sobic002G200900 Sobic002G200900 Sobic001G033100--Sobic002G200900 Sobic001G033100--Sobic008G064500 Sobic002G225400--Sobic009G185201 Sobic002G225400--Sobic006G084400 Sobic002G225400--Sobic007G108800 Sobic002G225400--Sobic009G206300 Sobic005G038400 Sobic005G038400 Sobic002G225400--Sobic005G038400 Sobic010G259100 Sobic010G259100 Sobic002G225400--Sobic010G259100 Sobic002G225400--Sobic002G109300 Sobic007G123800 Sobic007G123800 Sobic002G225400--Sobic007G123800 Sobic010G077250 Sobic010G077250 Sobic002G225400--Sobic010G077250 Sobic008G064500--Sobic006G235350 Sobic008G064500--Sobic009G210200 Sobic006G140500 Sobic006G140500 Sobic008G064500--Sobic006G140500 Sobic008G064500--Sobic003G370000 Sobic002G314300 Sobic002G314300 Sobic008G064500--Sobic002G314300 Sobic008G064500--Sobic001G289500 Sobic008G064500--Sobic003G005000 Sobic004G303200 Sobic004G303200 Sobic008G064500--Sobic004G303200 Sobic008G064500--Sobic002G047400 Sobic007G108800--Sobic005G038400 Sobic007G108800--Sobic006G084400 Sobic007G108800--Sobic002G225400 Sobic007G108800--Sobic009G185201 Sobic004G338100 Sobic004G338100 Sobic007G108800--Sobic004G338100 Sobic007G108800--Sobic010G259100 Sobic007G108800--Sobic007G069000 Sobic007G108800--Sobic001G033100 Sobic007G108800--Sobic003G131800 Sobic002G227700 Sobic002G227700 Sobic003G022300--Sobic002G227700 Sobic003G022300--Sobic004G020300 Sobic001G221300 Sobic001G221300 Sobic003G022300--Sobic001G221300 Sobic001G295300 Sobic001G295300 Sobic003G022300--Sobic001G295300 Sobic003G022300--Sobic009G210200 Sobic003G022300--Sobic001G033100 Sobic003G022300--Sobic006G067400 Sobic004G343900 Sobic004G343900 Sobic003G022300--Sobic004G343900 Sobic007G004700 Sobic007G004700 Sobic003G022300--Sobic007G004700 Sobic006G084400--Sobic002G225400 Sobic001G500100 Sobic001G500100 Sobic006G084400--Sobic001G500100 Sobic006G084400--Sobic001G033100 Sobic006G084400--Sobic001G222600 Sobic006G084400--Sobic009G185201 Sobic006G084400--Sobic007G108800 Sobic006G084400--Sobic009G210200 Sobic006G084400--Sobic005G038400 Sobic003G375700 Sobic003G375700 Sobic006G084400--Sobic003G375700
Octagon: transcription factors


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