Gene annotation
Transcriptome id Sobic.009G185301.1
Synonym -
Functional annotation -
UniProt A0A1Z5R387
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G166300 gibberellin 20 oxidase 2, putative, expressed -
2 Sobic.009G185201 - -
3 Sobic.003G334000 expressed protein -
4 Sobic.010G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
5 Sobic.002G036900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS3-19 - C2H2 zinc finger protein, expressed -
6 Sobic.003G051000 expressed protein -
7 Sobic.008G171000 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
8 Sobic.009G146900 - -
9 Sobic.007G213100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@citrate transporter, putative, expressed K14445: solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
10 Sobic.010G259100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized UPF0114 domain containing protein, expressed -
11 Sobic.010G046700 ABC transporter, ATP-binding protein, putative, expressed -
12 Sobic.010G233450 - -
13 Sobic.003G425500 Calcium-binding protein(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML10 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
14 Sobic.009G075600 B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
15 Sobic.004G017000 leucine rich repeat protein, putative, expressed -
16 Sobic.005G091300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
17 Sobic.004G332100 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.002G367100 protein of unknown function DUF1675 domain containing protein, expressed -
19 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
20 Sobic.009G136700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4


Gene co-expression network
sample Sobic009G185301 Sobic009G185301 Sobic001G166300 Sobic001G166300 Sobic009G185301--Sobic001G166300 Sobic009G185201 Sobic009G185201 Sobic009G185301--Sobic009G185201 Sobic003G334000 Sobic003G334000 Sobic009G185301--Sobic003G334000 Sobic010G212100 Sobic010G212100 Sobic009G185301--Sobic010G212100 Sobic002G036900 Sobic002G036900 Sobic009G185301--Sobic002G036900 Sobic003G051000 Sobic003G051000 Sobic009G185301--Sobic003G051000 Sobic008G171000 Sobic008G171000 Sobic009G185301--Sobic008G171000 Sobic009G146900 Sobic009G146900 Sobic009G185301--Sobic009G146900 Sobic007G213100 Sobic007G213100 Sobic009G185301--Sobic007G213100 Sobic001G166300--Sobic009G185201 Sobic004G347200 Sobic004G347200 Sobic001G166300--Sobic004G347200 Sobic008G065000 Sobic008G065000 Sobic001G166300--Sobic008G065000 Sobic001G033100 Sobic001G033100 Sobic001G166300--Sobic001G033100 Sobic002G225400 Sobic002G225400 Sobic001G166300--Sobic002G225400 Sobic008G064500 Sobic008G064500 Sobic001G166300--Sobic008G064500 Sobic007G108800 Sobic007G108800 Sobic001G166300--Sobic007G108800 Sobic003G022300 Sobic003G022300 Sobic001G166300--Sobic003G022300 Sobic006G084400 Sobic006G084400 Sobic001G166300--Sobic006G084400 Sobic009G185201--Sobic002G225400 Sobic009G185201--Sobic003G022300 Sobic009G185201--Sobic006G084400 Sobic009G206300 Sobic009G206300 Sobic009G185201--Sobic009G206300 Sobic009G185201--Sobic001G033100 Sobic009G185201--Sobic007G108800 Sobic003G131800 Sobic003G131800 Sobic009G185201--Sobic003G131800 Sobic009G210200 Sobic009G210200 Sobic009G185201--Sobic009G210200 Sobic003G042700 Sobic003G042700 Sobic009G185201--Sobic003G042700 Sobic003G339700 Sobic003G339700 Sobic003G334000--Sobic003G339700 Sobic003G381700 Sobic003G381700 Sobic003G334000--Sobic003G381700 Sobic003G277600 Sobic003G277600 Sobic003G334000--Sobic003G277600 Sobic007G062200 Sobic007G062200 Sobic003G334000--Sobic007G062200 Sobic003G372400 Sobic003G372400 Sobic003G334000--Sobic003G372400 Sobic003G334000--Sobic003G051000 Sobic006G064200 Sobic006G064200 Sobic003G334000--Sobic006G064200 Sobic008G077500 Sobic008G077500 Sobic003G334000--Sobic008G077500 Sobic006G130000 Sobic006G130000 Sobic003G334000--Sobic006G130000 Sobic004G276200 Sobic004G276200 Sobic010G212100--Sobic004G276200 Sobic008G014200 Sobic008G014200 Sobic010G212100--Sobic008G014200 Sobic004G073400 Sobic004G073400 Sobic010G212100--Sobic004G073400 Sobic003G109832 Sobic003G109832 Sobic010G212100--Sobic003G109832 Sobic005G087800 Sobic005G087800 Sobic010G212100--Sobic005G087800 Sobic003G078501 Sobic003G078501 Sobic010G212100--Sobic003G078501 Sobic002G189000 Sobic002G189000 Sobic010G212100--Sobic002G189000 Sobic004G017000 Sobic004G017000 Sobic010G212100--Sobic004G017000 Sobic003G233900 Sobic003G233900 Sobic010G212100--Sobic003G233900 Sobic002G036900--Sobic007G108800 Sobic008G015800 Sobic008G015800 Sobic002G036900--Sobic008G015800 Sobic005G038400 Sobic005G038400 Sobic002G036900--Sobic005G038400 Sobic007G108400 Sobic007G108400 Sobic002G036900--Sobic007G108400 Sobic009G136700 Sobic009G136700 Sobic002G036900--Sobic009G136700 Sobic004G338100 Sobic004G338100 Sobic002G036900--Sobic004G338100 Sobic002G036900--Sobic002G225400 Sobic002G036900--Sobic006G084400 Sobic005G016400 Sobic005G016400 Sobic002G036900--Sobic005G016400 Sobic007G164000 Sobic007G164000 Sobic003G051000--Sobic007G164000 Sobic001G057700 Sobic001G057700 Sobic003G051000--Sobic001G057700 Sobic004G169000 Sobic004G169000 Sobic003G051000--Sobic004G169000 Sobic005G084800 Sobic005G084800 Sobic003G051000--Sobic005G084800 Sobic010G236300 Sobic010G236300 Sobic003G051000--Sobic010G236300 Sobic001G498000 Sobic001G498000 Sobic003G051000--Sobic001G498000 Sobic003G043300 Sobic003G043300 Sobic003G051000--Sobic003G043300 Sobic002G187700 Sobic002G187700 Sobic003G051000--Sobic002G187700 Sobic003G355900 Sobic003G355900 Sobic003G051000--Sobic003G355900 Sobic008G171000--Sobic004G276200 Sobic002G086800 Sobic002G086800 Sobic008G171000--Sobic002G086800 Sobic001G391300 Sobic001G391300 Sobic008G171000--Sobic001G391300 Sobic006G220300 Sobic006G220300 Sobic008G171000--Sobic006G220300 Sobic002G321300 Sobic002G321300 Sobic008G171000--Sobic002G321300 Sobic008G171000--Sobic007G213100 Sobic004G332100 Sobic004G332100 Sobic008G171000--Sobic004G332100 Sobic009G155700 Sobic009G155700 Sobic008G171000--Sobic009G155700 Sobic003G298600 Sobic003G298600 Sobic008G171000--Sobic003G298600 Sobic010G249800 Sobic010G249800 Sobic009G146900--Sobic010G249800 Sobic009G146900--Sobic009G185301 Sobic009G075600 Sobic009G075600 Sobic009G146900--Sobic009G075600 Sobic003G406000 Sobic003G406000 Sobic009G146900--Sobic003G406000 Sobic006G030500 Sobic006G030500 Sobic009G146900--Sobic006G030500 Sobic006G038951 Sobic006G038951 Sobic009G146900--Sobic006G038951 Sobic010G233450 Sobic010G233450 Sobic009G146900--Sobic010G233450 Sobic007G026400 Sobic007G026400 Sobic009G146900--Sobic007G026400 Sobic007G013800 Sobic007G013800 Sobic009G146900--Sobic007G013800 Sobic007G213100--Sobic002G321300 Sobic007G213100--Sobic003G051000 Sobic007G146400 Sobic007G146400 Sobic007G213100--Sobic007G146400 Sobic007G213100--Sobic003G339700 Sobic001G160800 Sobic001G160800 Sobic007G213100--Sobic001G160800 Sobic001G284475 Sobic001G284475 Sobic007G213100--Sobic001G284475 Sobic009G069300 Sobic009G069300 Sobic007G213100--Sobic009G069300 Sobic010G251300 Sobic010G251300 Sobic007G213100--Sobic010G251300 Sobic007G213100--Sobic008G171000
Octagon: transcription factors


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