Gene annotation
Transcriptome id Sobic.001G211200.1
Synonym Sb01g018680
Functional annotation RIPER3 - Ripening-related family protein precursor, putative, expressed
UniProt C5WXG2
Pfam -
Panther DB PTHR31836 PTHR31836:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g34760.1 : RIPER3 - Ripening-related family protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a006517 , Zm00025a006516
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G067933 - -
2 Sobic.001G311900 OsSCP47 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
3 Sobic.002G154900 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
4 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.003G415000 DUF567 domain containing protein, putative, expressed -
6 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
7 Sobic.001G363400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
8 Sobic.003G269000 STE_MEKK_ste11_MAP3K.7 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
9 Sobic.004G064500 class I glutamine amidotransferase, putative, expressed -
10 Sobic.010G211400 OsRCI2-9 - Putative low temperature and salt responsive protein, expressed -
11 Sobic.008G187200 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed -
12 Sobic.005G180500 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.008G077550 - -
14 Sobic.009G205500 harpin-induced protein 1 domain containing protein, expressed -
15 Sobic.004G246600 expressed protein -
16 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
17 Sobic.004G315200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
18 Sobic.003G073380 - -
19 Sobic.001G143100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
20 Sobic.006G217100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic001G211200 Sobic001G211200 Sobic005G067933 Sobic005G067933 Sobic001G211200--Sobic005G067933 Sobic001G311900 Sobic001G311900 Sobic001G211200--Sobic001G311900 Sobic002G154900 Sobic002G154900 Sobic001G211200--Sobic002G154900 Sobic007G148500 Sobic007G148500 Sobic001G211200--Sobic007G148500 Sobic003G415000 Sobic003G415000 Sobic001G211200--Sobic003G415000 Sobic002G184300 Sobic002G184300 Sobic001G211200--Sobic002G184300 Sobic001G363400 Sobic001G363400 Sobic001G211200--Sobic001G363400 Sobic003G269000 Sobic003G269000 Sobic001G211200--Sobic003G269000 Sobic004G064500 Sobic004G064500 Sobic001G211200--Sobic004G064500 Sobic005G067933--Sobic002G154900 Sobic005G067933--Sobic001G211200 Sobic005G067933--Sobic004G064500 Sobic005G067933--Sobic003G269000 Sobic005G067933--Sobic003G415000 Sobic005G067933--Sobic001G311900 Sobic008G158600 Sobic008G158600 Sobic005G067933--Sobic008G158600 Sobic006G234850 Sobic006G234850 Sobic005G067933--Sobic006G234850 Sobic005G156850 Sobic005G156850 Sobic005G067933--Sobic005G156850 Sobic001G311900--Sobic007G148500 Sobic004G295600 Sobic004G295600 Sobic001G311900--Sobic004G295600 Sobic001G143100 Sobic001G143100 Sobic001G311900--Sobic001G143100 Sobic005G180500 Sobic005G180500 Sobic001G311900--Sobic005G180500 Sobic002G269100 Sobic002G269100 Sobic001G311900--Sobic002G269100 Sobic001G311900--Sobic001G211200 Sobic004G229500 Sobic004G229500 Sobic001G311900--Sobic004G229500 Sobic001G311900--Sobic001G363400 Sobic004G246600 Sobic004G246600 Sobic001G311900--Sobic004G246600 Sobic002G154900--Sobic005G067933 Sobic002G154900--Sobic008G158600 Sobic001G162233 Sobic001G162233 Sobic002G154900--Sobic001G162233 Sobic007G054900 Sobic007G054900 Sobic002G154900--Sobic007G054900 Sobic004G292600 Sobic004G292600 Sobic002G154900--Sobic004G292600 Sobic005G011900 Sobic005G011900 Sobic002G154900--Sobic005G011900 Sobic002G012300 Sobic002G012300 Sobic002G154900--Sobic002G012300 Sobic002G154900--Sobic001G211200 Sobic010G156400 Sobic010G156400 Sobic002G154900--Sobic010G156400 Sobic007G148500--Sobic004G246600 Sobic007G148500--Sobic001G311900 Sobic007G148500--Sobic001G143100 Sobic007G148500--Sobic004G229500 Sobic005G013500 Sobic005G013500 Sobic007G148500--Sobic005G013500 Sobic009G205500 Sobic009G205500 Sobic007G148500--Sobic009G205500 Sobic007G122800 Sobic007G122800 Sobic007G148500--Sobic007G122800 Sobic007G148500--Sobic002G269100 Sobic007G148500--Sobic002G184300 Sobic003G415000--Sobic001G363400 Sobic003G415000--Sobic007G122800 Sobic003G415000--Sobic004G064500 Sobic004G315200 Sobic004G315200 Sobic003G415000--Sobic004G315200 Sobic003G415000--Sobic002G184300 Sobic002G358300 Sobic002G358300 Sobic003G415000--Sobic002G358300 Sobic003G415000--Sobic007G148500 Sobic003G415000--Sobic004G246600 Sobic001G330400 Sobic001G330400 Sobic003G415000--Sobic001G330400 Sobic002G184300--Sobic001G363400 Sobic003G230100 Sobic003G230100 Sobic002G184300--Sobic003G230100 Sobic002G184300--Sobic002G358300 Sobic004G097100 Sobic004G097100 Sobic002G184300--Sobic004G097100 Sobic009G032000 Sobic009G032000 Sobic002G184300--Sobic009G032000 Sobic002G184300--Sobic009G205500 Sobic002G184300--Sobic004G246600 Sobic002G184300--Sobic005G013500 Sobic004G308900 Sobic004G308900 Sobic002G184300--Sobic004G308900 Sobic001G363400--Sobic002G184300 Sobic001G330200 Sobic001G330200 Sobic001G363400--Sobic001G330200 Sobic001G363400--Sobic005G013500 Sobic001G363400--Sobic009G032000 Sobic001G330100 Sobic001G330100 Sobic001G363400--Sobic001G330100 Sobic001G363400--Sobic002G358300 Sobic009G144700 Sobic009G144700 Sobic001G363400--Sobic009G144700 Sobic001G363400--Sobic001G330400 Sobic001G363400--Sobic004G246600 Sobic003G073380 Sobic003G073380 Sobic003G269000--Sobic003G073380 Sobic005G086600 Sobic005G086600 Sobic003G269000--Sobic005G086600 Sobic003G268600 Sobic003G268600 Sobic003G269000--Sobic003G268600 Sobic009G186800 Sobic009G186800 Sobic003G269000--Sobic009G186800 Sobic006G235000 Sobic006G235000 Sobic003G269000--Sobic006G235000 Sobic003G269000--Sobic001G330400 Sobic003G269000--Sobic004G064500 Sobic003G269000--Sobic004G315200 Sobic002G063800 Sobic002G063800 Sobic003G269000--Sobic002G063800 Sobic009G192600 Sobic009G192600 Sobic004G064500--Sobic009G192600 Sobic001G259400 Sobic001G259400 Sobic004G064500--Sobic001G259400 Sobic004G064500--Sobic007G122800 Sobic004G064500--Sobic005G086600 Sobic004G064500--Sobic003G268600 Sobic002G189100 Sobic002G189100 Sobic004G064500--Sobic002G189100 Sobic004G064500--Sobic003G269000 Sobic001G267600 Sobic001G267600 Sobic004G064500--Sobic001G267600 Sobic006G007900 Sobic006G007900 Sobic004G064500--Sobic006G007900
Octagon: transcription factors


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