Gene annotation
Transcriptome id Sobic.001G223200.1
Synonym PTR3, ATPTR3, Sb01g019640
Functional annotation POT domain containing peptide transporter, putative, expressed
UniProt C5WZB2
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF115
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G46050 : peptide transporter 3
RAP-DB (Rice) LOC_Os10g33170.1 : POT domain containing peptide transporter, putative, expressed
MaizeGDB (Corn) Zm00025a000541 , Zm00025a006660 , Zm00025a017653 , Zm00025a006658
Brachypodium PNT67517 , PNT67518 , KQK02769 , KQJ97033 , KQJ97032 , KQJ97031 , KQK23746
Barley HORVU1Hr1G039670.4 , HORVU4Hr1G083650.2 , HORVU4Hr1G083650.3 , HORVU4Hr1G083650.1 , HORVU4Hr1G083650.6 , HORVU4Hr1G083650.7 , HORVU4Hr1G083650.4 , HORVU4Hr1G083650.5 , HORVU4Hr1G083650.8 , HORVU4Hr1G088890.1 , HORVU4Hr1G088890.2 , HORVU1Hr1G039720.10 , HORVU1Hr1G039720.11 , HORVU1Hr1G039720.12 , HORVU1Hr1G039720.13 , HORVU1Hr1G039720.14 , HORVU1Hr1G039720.15 , HORVU1Hr1G039720.16 , HORVU1Hr1G039720.17 , HORVU3Hr1G014510.2 , HORVU3Hr1G014510.3 , HORVU3Hr1G014510.1 , HORVU1Hr1G039670.8 , HORVU1Hr1G039670.9 , HORVU1Hr1G039670.1 , HORVU1Hr1G039670.2 , HORVU1Hr1G039670.3 , HORVU1Hr1G039670.5 , HORVU1Hr1G039670.6 , HORVU1Hr1G039670.7 , HORVU6Hr1G008680.1 , HORVU1Hr1G039720.8 , HORVU1Hr1G039720.9 , HORVU1Hr1G039720.2 , HORVU1Hr1G039720.3 , HORVU1Hr1G039720.1 , HORVU1Hr1G039720.6 , HORVU1Hr1G039720.7 , HORVU1Hr1G039720.4 , HORVU1Hr1G039720.5
Wheat TraesCS3A02G081100 , TraesCS3A02G081100 , TraesCS3A02G081100 , TraesCS3D02G057000 , TraesCS1A02G150400 , TraesCS3B02G424700 , TraesCS1D02G147400 , TraesCS1B02G168000 , TraesCS6A02G041300 , TraesCS3D02G385600 , TraesCS1D02G147200 , TraesCS3D02G189500 , TraesCS4D02G335100 , TraesCS3A02G185600 , TraesCS3B02G215200 , TraesCS1A02G150200 , TraesCS1B02G168100 , TraesCS4B02G338600 , TraesCS5A02G508500 , TraesCS6D02G047600 , TraesCS3B02G069900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G363300 - -
2 Sobic.004G211700 - -
3 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
4 Sobic.001G473500 domain of unknown function DUF966 domain containing protein, expressed -
5 Sobic.002G227900 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
7 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
8 Sobic.010G166300 expressed protein -
9 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
10 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
11 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
12 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
13 Sobic.005G034500 receptor kinase, putative, expressed -
14 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.005G009600 pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.009G023900 homeobox domain containing protein, expressed -
17 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
18 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
19 Sobic.006G273600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic001G223200 Sobic001G223200 Sobic002G363300 Sobic002G363300 Sobic001G223200--Sobic002G363300 Sobic004G211700 Sobic004G211700 Sobic001G223200--Sobic004G211700 Sobic001G286700 Sobic001G286700 Sobic001G223200--Sobic001G286700 Sobic001G473500 Sobic001G473500 Sobic001G223200--Sobic001G473500 Sobic002G227900 Sobic002G227900 Sobic001G223200--Sobic002G227900 Sobic005G199700 Sobic005G199700 Sobic001G223200--Sobic005G199700 Sobic009G146700 Sobic009G146700 Sobic001G223200--Sobic009G146700 Sobic010G166300 Sobic010G166300 Sobic001G223200--Sobic010G166300 Sobic003G027100 Sobic003G027100 Sobic001G223200--Sobic003G027100 Sobic006G273600 Sobic006G273600 Sobic002G363300--Sobic006G273600 Sobic002G363300--Sobic005G199700 Sobic002G363300--Sobic009G146700 Sobic003G010700 Sobic003G010700 Sobic002G363300--Sobic003G010700 Sobic002G363300--Sobic003G027100 Sobic003G338700 Sobic003G338700 Sobic002G363300--Sobic003G338700 Sobic002G363300--Sobic001G286700 Sobic005G009600 Sobic005G009600 Sobic002G363300--Sobic005G009600 Sobic007G170100 Sobic007G170100 Sobic002G363300--Sobic007G170100 Sobic004G342000 Sobic004G342000 Sobic004G211700--Sobic004G342000 Sobic009G023900 Sobic009G023900 Sobic004G211700--Sobic009G023900 Sobic003G178500 Sobic003G178500 Sobic004G211700--Sobic003G178500 Sobic004G211700--Sobic001G286700 Sobic004G211700--Sobic003G027100 Sobic005G218000 Sobic005G218000 Sobic004G211700--Sobic005G218000 Sobic001G341700 Sobic001G341700 Sobic004G211700--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic004G211700--Sobic002G312200 Sobic004G211700--Sobic010G166300 Sobic010G235300 Sobic010G235300 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic001G286700--Sobic002G363300 Sobic001G286700--Sobic004G211700 Sobic001G286700--Sobic006G273600 Sobic001G286700--Sobic001G473500 Sobic001G286700--Sobic003G338700 Sobic001G286700--Sobic005G199700 Sobic007G165800 Sobic007G165800 Sobic001G286700--Sobic007G165800 Sobic001G473500--Sobic001G286700 Sobic001G473500--Sobic004G211700 Sobic001G473500--Sobic002G363300 Sobic001G473500--Sobic010G235300 Sobic001G046400 Sobic001G046400 Sobic001G473500--Sobic001G046400 Sobic009G208300 Sobic009G208300 Sobic001G473500--Sobic009G208300 Sobic010G192500 Sobic010G192500 Sobic001G473500--Sobic010G192500 Sobic009G060800 Sobic009G060800 Sobic001G473500--Sobic009G060800 Sobic001G473500--Sobic009G146700 Sobic003G230000 Sobic003G230000 Sobic002G227900--Sobic003G230000 Sobic002G394500 Sobic002G394500 Sobic002G227900--Sobic002G394500 Sobic002G227900--Sobic001G473500 Sobic004G313200 Sobic004G313200 Sobic002G227900--Sobic004G313200 Sobic001G393200 Sobic001G393200 Sobic002G227900--Sobic001G393200 Sobic007G180200 Sobic007G180200 Sobic002G227900--Sobic007G180200 Sobic006G219500 Sobic006G219500 Sobic002G227900--Sobic006G219500 Sobic001G155700 Sobic001G155700 Sobic002G227900--Sobic001G155700 Sobic003G307200 Sobic003G307200 Sobic002G227900--Sobic003G307200 Sobic005G199700--Sobic009G146700 Sobic005G199700--Sobic003G338700 Sobic005G199700--Sobic002G363300 Sobic005G199700--Sobic007G180200 Sobic005G199700--Sobic001G286700 Sobic005G199700--Sobic006G273600 Sobic005G199700--Sobic003G010700 Sobic005G199700--Sobic003G027100 Sobic010G014700 Sobic010G014700 Sobic005G199700--Sobic010G014700 Sobic009G146700--Sobic005G199700 Sobic009G146700--Sobic003G338700 Sobic009G146700--Sobic002G363300 Sobic009G146700--Sobic010G014700 Sobic009G146700--Sobic003G010700 Sobic009G146700--Sobic001G286700 Sobic009G146700--Sobic007G180200 Sobic006G107500 Sobic006G107500 Sobic009G146700--Sobic006G107500 Sobic010G014500 Sobic010G014500 Sobic009G146700--Sobic010G014500 Sobic010G166300--Sobic009G023900 Sobic010G166300--Sobic005G009600 Sobic010G166300--Sobic003G178500 Sobic007G076100 Sobic007G076100 Sobic010G166300--Sobic007G076100 Sobic010G166300--Sobic001G341700 Sobic010G166300--Sobic002G312200 Sobic002G312300 Sobic002G312300 Sobic010G166300--Sobic002G312300 Sobic010G166300--Sobic003G027100 Sobic010G166300--Sobic005G218000 Sobic003G027100--Sobic003G178500 Sobic003G027100--Sobic002G363300 Sobic003G027100--Sobic001G286700 Sobic003G027100--Sobic010G235300 Sobic003G027100--Sobic004G211700 Sobic003G027100--Sobic010G166300 Sobic003G027100--Sobic007G165800 Sobic005G034500 Sobic005G034500 Sobic003G027100--Sobic005G034500 Sobic003G027100--Sobic002G312300
Octagon: transcription factors


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