Gene annotation
Transcriptome id Sobic.001G227601.1
Synonym -
Functional annotation -
UniProt A0A1Z5S6Y2
Pfam -
Panther DB PTHR10264 PTHR10264:SF90
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT5G62740 : SPFH/Band 7/PHB domain-containing membrane-associated protein family
RAP-DB (Rice) LOC_Os10g32700.1 : hypersensitive-induced response protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU1Hr1G038810.6 , HORVU1Hr1G038810.5 , HORVU1Hr1G038810.4 , HORVU1Hr1G038810.3 , HORVU1Hr1G038810.2 , HORVU1Hr1G038810.1
Wheat TraesCS1B02G164200 , TraesCS1D02G144600 , TraesCS1D02G144600 , TraesCS1A02G146000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G005750 - -
2 Sobic.004G087900 - -
3 Sobic.003G315900 - -
4 Sobic.007G031000 X8 domain containing protein, expressed -
5 Sobic.002G208301 - K05387: glutamate receptor, ionotropic, plant
6 Sobic.002G375600 expressed protein -
7 Sobic.009G106300 - -
8 Sobic.003G017300 CTP synthase, putative, expressed K01937: pyrG, CTP synthase
9 Sobic.004G258450 - -
10 Sobic.003G336300 C2 domain containing protein, putative, expressed -
11 Sobic.006G269300 - -
12 Sobic.010G183900 expressed protein -
13 Sobic.001G204400 MYB family transcription factor, putative, expressed -
14 Sobic.009G049100 - -
15 Sobic.007G189900 membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.009G192933 - -
17 Sobic.003G399800 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
18 Sobic.009G054200 pentatricopeptide, putative, expressed -
19 Sobic.005G230600 GRAS family transcription factor domain containing protein, expressed -
20 Sobic.008G159800 - -


Gene co-expression network
sample Sobic001G227601 Sobic001G227601 Sobic009G005750 Sobic009G005750 Sobic001G227601--Sobic009G005750 Sobic004G087900 Sobic004G087900 Sobic001G227601--Sobic004G087900 Sobic003G315900 Sobic003G315900 Sobic001G227601--Sobic003G315900 Sobic007G031000 Sobic007G031000 Sobic001G227601--Sobic007G031000 Sobic002G208301 Sobic002G208301 Sobic001G227601--Sobic002G208301 Sobic002G375600 Sobic002G375600 Sobic001G227601--Sobic002G375600 Sobic009G106300 Sobic009G106300 Sobic001G227601--Sobic009G106300 Sobic003G017300 Sobic003G017300 Sobic001G227601--Sobic003G017300 Sobic004G258450 Sobic004G258450 Sobic001G227601--Sobic004G258450 Sobic009G005750--Sobic002G375600 Sobic009G005750--Sobic004G087900 Sobic005G230600 Sobic005G230600 Sobic009G005750--Sobic005G230600 Sobic006G269300 Sobic006G269300 Sobic009G005750--Sobic006G269300 Sobic009G005750--Sobic007G031000 Sobic009G005750--Sobic001G227601 Sobic009G005750--Sobic009G106300 Sobic002G429200 Sobic002G429200 Sobic009G005750--Sobic002G429200 Sobic002G295550 Sobic002G295550 Sobic009G005750--Sobic002G295550 Sobic004G087900--Sobic003G315900 Sobic004G087900--Sobic009G106300 Sobic004G087900--Sobic009G005750 Sobic010G251800 Sobic010G251800 Sobic004G087900--Sobic010G251800 Sobic004G087900--Sobic001G227601 Sobic006G019000 Sobic006G019000 Sobic004G087900--Sobic006G019000 Sobic004G087900--Sobic002G295550 Sobic003G232200 Sobic003G232200 Sobic004G087900--Sobic003G232200 Sobic004G087900--Sobic003G017300 Sobic003G315900--Sobic004G087900 Sobic003G315900--Sobic010G251800 Sobic003G315900--Sobic001G227601 Sobic003G315900--Sobic009G106300 Sobic003G315900--Sobic006G019000 Sobic003G315900--Sobic003G232200 Sobic003G315900--Sobic009G005750 Sobic003G315900--Sobic002G295550 Sobic006G153550 Sobic006G153550 Sobic003G315900--Sobic006G153550 Sobic007G031000--Sobic002G375600 Sobic007G031000--Sobic009G005750 Sobic007G031000--Sobic002G295550 Sobic007G031000--Sobic002G429200 Sobic007G031000--Sobic001G227601 Sobic003G192801 Sobic003G192801 Sobic007G031000--Sobic003G192801 Sobic007G031000--Sobic005G230600 Sobic003G292800 Sobic003G292800 Sobic007G031000--Sobic003G292800 Sobic002G427201 Sobic002G427201 Sobic007G031000--Sobic002G427201 Sobic003G399800 Sobic003G399800 Sobic002G208301--Sobic003G399800 Sobic009G049100 Sobic009G049100 Sobic002G208301--Sobic009G049100 Sobic002G208301--Sobic001G227601 Sobic002G107700 Sobic002G107700 Sobic002G208301--Sobic002G107700 Sobic003G276400 Sobic003G276400 Sobic002G208301--Sobic003G276400 Sobic006G165501 Sobic006G165501 Sobic002G208301--Sobic006G165501 Sobic001G385132 Sobic001G385132 Sobic002G208301--Sobic001G385132 Sobic004G237900 Sobic004G237900 Sobic002G208301--Sobic004G237900 Sobic010G184201 Sobic010G184201 Sobic002G208301--Sobic010G184201 Sobic002G375600--Sobic002G429200 Sobic002G375600--Sobic007G031000 Sobic002G375600--Sobic005G230600 Sobic002G375600--Sobic003G292800 Sobic002G375600--Sobic009G005750 Sobic002G189350 Sobic002G189350 Sobic002G375600--Sobic002G189350 Sobic002G375600--Sobic002G295550 Sobic004G071401 Sobic004G071401 Sobic002G375600--Sobic004G071401 Sobic002G003900 Sobic002G003900 Sobic002G375600--Sobic002G003900 Sobic009G106300--Sobic004G087900 Sobic009G106300--Sobic003G017300 Sobic009G106300--Sobic006G269300 Sobic009G106300--Sobic009G005750 Sobic006G260101 Sobic006G260101 Sobic009G106300--Sobic006G260101 Sobic009G106300--Sobic003G315900 Sobic002G359200 Sobic002G359200 Sobic009G106300--Sobic002G359200 Sobic009G054200 Sobic009G054200 Sobic009G106300--Sobic009G054200 Sobic001G061000 Sobic001G061000 Sobic009G106300--Sobic001G061000 Sobic003G017300--Sobic009G054200 Sobic003G017300--Sobic006G269300 Sobic003G017300--Sobic009G106300 Sobic001G410300 Sobic001G410300 Sobic003G017300--Sobic001G410300 Sobic009G181900 Sobic009G181900 Sobic003G017300--Sobic009G181900 Sobic003G017300--Sobic006G260101 Sobic006G170800 Sobic006G170800 Sobic003G017300--Sobic006G170800 Sobic003G017300--Sobic009G005750 Sobic003G159400 Sobic003G159400 Sobic003G017300--Sobic003G159400 Sobic004G258450--Sobic004G237900 Sobic004G258450--Sobic003G399800 Sobic003G336300 Sobic003G336300 Sobic004G258450--Sobic003G336300 Sobic001G460150 Sobic001G460150 Sobic004G258450--Sobic001G460150 Sobic004G258450--Sobic009G049100 Sobic003G298000 Sobic003G298000 Sobic004G258450--Sobic003G298000 Sobic004G258450--Sobic002G429200 Sobic004G144300 Sobic004G144300 Sobic004G258450--Sobic004G144300 Sobic004G070150 Sobic004G070150 Sobic004G258450--Sobic004G070150
Octagon: transcription factors


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