Gene annotation
Transcriptome id Sobic.001G254200.2,Sobic.001G254200.3,Sobic.001G254200.1
Synonym Sb01g022460
Functional annotation "OsFBK12(Ortholog in rice:Chen et al., 2013)" (PubMedID : 31659839)
OsFBK12 - F-box domain and kelch repeat containing protein, expressed
UniProt C5WM95
Pfam PF01344
Panther DB PTHR24413 PTHR24413:SF133
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G14330 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os03g07530.1,LOC_Os03g07530.3 : OsFBK12 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a007011 , Zm00025a017820
Brachypodium -
Barley -
Wheat TraesCS4D02G286700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
3 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
4 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
5 Sobic.008G024400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@thaumatin-like protein 1 precursor, putative, expressed -
6 Sobic.009G236200 lectin-like receptor kinase 7, putative, expressed -
7 Sobic.001G212000 GEM, putative, expressed -
8 Sobic.005G215900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
9 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
10 Sobic.003G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
11 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
12 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -
13 Sobic.003G232900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
14 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
15 Sobic.004G341200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
16 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
17 Sobic.004G236000 laccase precursor protein, putative, expressed K05909: laccase
18 Sobic.007G125900 protein kinase domain containing protein, expressed -
19 Sobic.001G412700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.009G038501 - -


Gene co-expression network
sample Sobic001G254200 Sobic001G254200 Sobic004G236600 Sobic004G236600 Sobic001G254200--Sobic004G236600 Sobic004G102400 Sobic004G102400 Sobic001G254200--Sobic004G102400 Sobic001G151800 Sobic001G151800 Sobic001G254200--Sobic001G151800 Sobic003G348400 Sobic003G348400 Sobic001G254200--Sobic003G348400 Sobic008G024400 Sobic008G024400 Sobic001G254200--Sobic008G024400 Sobic009G236200 Sobic009G236200 Sobic001G254200--Sobic009G236200 Sobic001G212000 Sobic001G212000 Sobic001G254200--Sobic001G212000 Sobic005G215900 Sobic005G215900 Sobic001G254200--Sobic005G215900 Sobic005G152100 Sobic005G152100 Sobic001G254200--Sobic005G152100 Sobic001G488500 Sobic001G488500 Sobic004G236600--Sobic001G488500 Sobic004G236600--Sobic005G152100 Sobic002G322900 Sobic002G322900 Sobic004G236600--Sobic002G322900 Sobic004G255000 Sobic004G255000 Sobic004G236600--Sobic004G255000 Sobic004G246200 Sobic004G246200 Sobic004G236600--Sobic004G246200 Sobic001G412700 Sobic001G412700 Sobic004G236600--Sobic001G412700 Sobic004G236600--Sobic008G024400 Sobic004G236600--Sobic005G215900 Sobic009G038501 Sobic009G038501 Sobic004G236600--Sobic009G038501 Sobic003G338400 Sobic003G338400 Sobic004G102400--Sobic003G338400 Sobic001G158500 Sobic001G158500 Sobic004G102400--Sobic001G158500 Sobic001G003000 Sobic001G003000 Sobic004G102400--Sobic001G003000 Sobic009G167700 Sobic009G167700 Sobic004G102400--Sobic009G167700 Sobic005G150800 Sobic005G150800 Sobic004G102400--Sobic005G150800 Sobic006G271200 Sobic006G271200 Sobic004G102400--Sobic006G271200 Sobic001G089800 Sobic001G089800 Sobic004G102400--Sobic001G089800 Sobic001G057800 Sobic001G057800 Sobic004G102400--Sobic001G057800 Sobic004G042300 Sobic004G042300 Sobic004G102400--Sobic004G042300 Sobic001G151800--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic001G151800--Sobic002G355200 Sobic007G125900 Sobic007G125900 Sobic001G151800--Sobic007G125900 Sobic003G232900 Sobic003G232900 Sobic001G151800--Sobic003G232900 Sobic001G151800--Sobic003G348400 Sobic001G151800--Sobic004G236600 Sobic005G117400 Sobic005G117400 Sobic001G151800--Sobic005G117400 Sobic006G140000 Sobic006G140000 Sobic001G151800--Sobic006G140000 Sobic009G004200 Sobic009G004200 Sobic001G151800--Sobic009G004200 Sobic003G348400--Sobic007G125900 Sobic003G348400--Sobic005G117400 Sobic003G348400--Sobic001G151800 Sobic003G348400--Sobic003G338400 Sobic003G348400--Sobic004G102400 Sobic003G348400--Sobic006G140000 Sobic006G091100 Sobic006G091100 Sobic003G348400--Sobic006G091100 Sobic005G212700 Sobic005G212700 Sobic003G348400--Sobic005G212700 Sobic003G348400--Sobic001G003000 Sobic008G024400--Sobic005G152100 Sobic008G024400--Sobic004G246200 Sobic008G024400--Sobic001G412700 Sobic008G024400--Sobic004G255000 Sobic008G024400--Sobic004G236600 Sobic001G249300 Sobic001G249300 Sobic008G024400--Sobic001G249300 Sobic001G280200 Sobic001G280200 Sobic008G024400--Sobic001G280200 Sobic008G024400--Sobic001G212000 Sobic008G024400--Sobic005G215900 Sobic009G236200--Sobic001G151800 Sobic009G236200--Sobic007G125900 Sobic009G236200--Sobic002G355200 Sobic005G016800 Sobic005G016800 Sobic009G236200--Sobic005G016800 Sobic002G381300 Sobic002G381300 Sobic009G236200--Sobic002G381300 Sobic009G236200--Sobic004G236600 Sobic009G236200--Sobic009G167700 Sobic009G236200--Sobic004G102400 Sobic009G236200--Sobic005G215900 Sobic010G098100 Sobic010G098100 Sobic001G212000--Sobic010G098100 Sobic003G085300 Sobic003G085300 Sobic001G212000--Sobic003G085300 Sobic001G212000--Sobic005G152100 Sobic001G101400 Sobic001G101400 Sobic001G212000--Sobic001G101400 Sobic001G483500 Sobic001G483500 Sobic001G212000--Sobic001G483500 Sobic001G212000--Sobic001G412700 Sobic005G151700 Sobic005G151700 Sobic001G212000--Sobic005G151700 Sobic001G212000--Sobic008G024400 Sobic001G212000--Sobic004G236600 Sobic005G215900--Sobic005G152100 Sobic005G215900--Sobic004G236600 Sobic005G215900--Sobic002G381300 Sobic005G216000 Sobic005G216000 Sobic005G215900--Sobic005G216000 Sobic005G215900--Sobic001G488500 Sobic005G215900--Sobic008G024400 Sobic002G304000 Sobic002G304000 Sobic005G215900--Sobic002G304000 Sobic003G149200 Sobic003G149200 Sobic005G215900--Sobic003G149200 Sobic005G215900--Sobic001G249300 Sobic005G152100--Sobic004G246200 Sobic005G152100--Sobic004G236600 Sobic005G018500 Sobic005G018500 Sobic005G152100--Sobic005G018500 Sobic005G152100--Sobic004G255000 Sobic005G152100--Sobic001G249300 Sobic003G259200 Sobic003G259200 Sobic005G152100--Sobic003G259200 Sobic005G152100--Sobic002G322900 Sobic009G054500 Sobic009G054500 Sobic005G152100--Sobic009G054500 Sobic005G152100--Sobic001G412700
Octagon: transcription factors


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