Gene annotation
Transcriptome id Sobic.001G254300.1
Synonym Sb01g022470
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
uncharacterized oxidoreductase, putative, expressed
UniProt C5WM96
Pfam PF01408
Panther DB PTHR22604 PTHR22604:SF132
NCBI CDD KOG2741; Dimeric dihydrodiol dehydrogenase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G09670 : Oxidoreductase family protein
RAP-DB (Rice) LOC_Os10g26400.2 : uncharacterized oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a017821
Brachypodium KQK13029
Barley HORVU3Hr1G036150.4 , HORVU3Hr1G036150.5 , HORVU3Hr1G036150.2 , HORVU3Hr1G036150.3 , HORVU3Hr1G036150.1 , HORVU3Hr1G036150.8 , HORVU1Hr1G085660.1 , HORVU1Hr1G085660.2 , HORVU1Hr1G085660.3 , HORVU1Hr1G085660.4
Wheat TraesCS3B02G207600 , TraesCS1A02G388800 , TraesCS3A02G177400 , TraesCS3D02G183400 , TraesCS1A02G389200 , TraesCS1D02G396800 , TraesCS1B02G417000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
2 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
3 Sobic.004G241300 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
4 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
5 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
6 Sobic.001G529200 no apical meristem protein, putative, expressed -
7 Sobic.010G181701 - -
8 Sobic.010G123100 transporter-related, putative, expressed -
9 Sobic.006G219801 - -
10 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
11 Sobic.010G048966 - -
12 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
13 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
14 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
15 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.007G125200 cell division cycle protein 48, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
17 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
18 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
19 Sobic.005G138800 expressed protein -
20 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E


Gene co-expression network
sample Sobic001G254300 Sobic001G254300 Sobic002G186200 Sobic002G186200 Sobic001G254300--Sobic002G186200 Sobic010G253200 Sobic010G253200 Sobic001G254300--Sobic010G253200 Sobic004G241300 Sobic004G241300 Sobic001G254300--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic001G254300--Sobic003G423700 Sobic001G435700 Sobic001G435700 Sobic001G254300--Sobic001G435700 Sobic001G529200 Sobic001G529200 Sobic001G254300--Sobic001G529200 Sobic010G181701 Sobic010G181701 Sobic001G254300--Sobic010G181701 Sobic010G123100 Sobic010G123100 Sobic001G254300--Sobic010G123100 Sobic006G219801 Sobic006G219801 Sobic001G254300--Sobic006G219801 Sobic004G261800 Sobic004G261800 Sobic002G186200--Sobic004G261800 Sobic002G186200--Sobic003G423700 Sobic002G186200--Sobic010G253200 Sobic002G420100 Sobic002G420100 Sobic002G186200--Sobic002G420100 Sobic002G186200--Sobic004G241300 Sobic001G126800 Sobic001G126800 Sobic002G186200--Sobic001G126800 Sobic008G156600 Sobic008G156600 Sobic002G186200--Sobic008G156600 Sobic003G013700 Sobic003G013700 Sobic002G186200--Sobic003G013700 Sobic001G400000 Sobic001G400000 Sobic002G186200--Sobic001G400000 Sobic010G253200--Sobic002G420100 Sobic010G253200--Sobic004G241300 Sobic010G253200--Sobic003G423700 Sobic008G104000 Sobic008G104000 Sobic010G253200--Sobic008G104000 Sobic009G042000 Sobic009G042000 Sobic010G253200--Sobic009G042000 Sobic010G253200--Sobic002G186200 Sobic010G253200--Sobic004G261800 Sobic008G073500 Sobic008G073500 Sobic010G253200--Sobic008G073500 Sobic002G308000 Sobic002G308000 Sobic010G253200--Sobic002G308000 Sobic008G171900 Sobic008G171900 Sobic004G241300--Sobic008G171900 Sobic004G241300--Sobic008G156600 Sobic009G163100 Sobic009G163100 Sobic004G241300--Sobic009G163100 Sobic004G241300--Sobic003G423700 Sobic004G241300--Sobic001G435700 Sobic005G020600 Sobic005G020600 Sobic004G241300--Sobic005G020600 Sobic004G241300--Sobic002G420100 Sobic004G241300--Sobic010G253200 Sobic002G172401 Sobic002G172401 Sobic004G241300--Sobic002G172401 Sobic003G423700--Sobic001G126800 Sobic003G423700--Sobic004G241300 Sobic003G423700--Sobic008G104000 Sobic003G423700--Sobic008G156600 Sobic003G423700--Sobic002G420100 Sobic003G423700--Sobic009G163100 Sobic010G182000 Sobic010G182000 Sobic003G423700--Sobic010G182000 Sobic003G423700--Sobic008G171900 Sobic003G423700--Sobic010G253200 Sobic001G435700--Sobic008G171900 Sobic001G435700--Sobic009G163100 Sobic001G435700--Sobic008G156600 Sobic004G093100 Sobic004G093100 Sobic001G435700--Sobic004G093100 Sobic001G435700--Sobic005G020600 Sobic001G435700--Sobic004G241300 Sobic003G376900 Sobic003G376900 Sobic001G435700--Sobic003G376900 Sobic005G050400 Sobic005G050400 Sobic001G435700--Sobic005G050400 Sobic010G238300 Sobic010G238300 Sobic001G435700--Sobic010G238300 Sobic001G529200--Sobic010G253200 Sobic001G529200--Sobic002G186200 Sobic001G529200--Sobic002G420100 Sobic001G529200--Sobic004G241300 Sobic001G529200--Sobic004G261800 Sobic003G348100 Sobic003G348100 Sobic001G529200--Sobic003G348100 Sobic001G529200--Sobic003G423700 Sobic008G011800 Sobic008G011800 Sobic001G529200--Sobic008G011800 Sobic003G159700 Sobic003G159700 Sobic001G529200--Sobic003G159700 Sobic001G251000 Sobic001G251000 Sobic010G181701--Sobic001G251000 Sobic005G200100 Sobic005G200100 Sobic010G181701--Sobic005G200100 Sobic004G348000 Sobic004G348000 Sobic010G181701--Sobic004G348000 Sobic010G082300 Sobic010G082300 Sobic010G181701--Sobic010G082300 Sobic009G125100 Sobic009G125100 Sobic010G181701--Sobic009G125100 Sobic009G176200 Sobic009G176200 Sobic010G181701--Sobic009G176200 Sobic004G059200 Sobic004G059200 Sobic010G181701--Sobic004G059200 Sobic003G270900 Sobic003G270900 Sobic010G181701--Sobic003G270900 Sobic010G026200 Sobic010G026200 Sobic010G181701--Sobic010G026200 Sobic004G353300 Sobic004G353300 Sobic010G123100--Sobic004G353300 Sobic004G298600 Sobic004G298600 Sobic010G123100--Sobic004G298600 Sobic010G274800 Sobic010G274800 Sobic010G123100--Sobic010G274800 Sobic008G095900 Sobic008G095900 Sobic010G123100--Sobic008G095900 Sobic001G308500 Sobic001G308500 Sobic010G123100--Sobic001G308500 Sobic001G385300 Sobic001G385300 Sobic010G123100--Sobic001G385300 Sobic008G085950 Sobic008G085950 Sobic010G123100--Sobic008G085950 Sobic007G105700 Sobic007G105700 Sobic010G123100--Sobic007G105700 Sobic006G265800 Sobic006G265800 Sobic010G123100--Sobic006G265800 Sobic004G051600 Sobic004G051600 Sobic006G219801--Sobic004G051600 Sobic006G219801--Sobic010G181701 Sobic006G219801--Sobic004G298600 Sobic001G457500 Sobic001G457500 Sobic006G219801--Sobic001G457500 Sobic009G047066 Sobic009G047066 Sobic006G219801--Sobic009G047066 Sobic002G339666 Sobic002G339666 Sobic006G219801--Sobic002G339666 Sobic006G219801--Sobic001G385300 Sobic006G219801--Sobic009G163100 Sobic006G219801--Sobic010G123100
Octagon: transcription factors


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