Gene annotation
Transcriptome id Sobic.005G138800.1
Synonym Sb05g020310
Functional annotation expressed protein
UniProt A0A1Z5RJ56
Pfam PF04819
Panther DB PTHR16007 PTHR16007:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13890 : Family of unknown function (DUF716)
RAP-DB (Rice) LOC_Os11g32950.1 : expressed protein
MaizeGDB (Corn) Zm00025a015702
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
2 Sobic.005G020600 Mad3/BUB1 homology region 1 domain containing protein, expressed -
3 Sobic.004G241300 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
4 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
5 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
6 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
7 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
8 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
9 Sobic.002G172401 - K07904: Ras-related protein Rab-11A
10 Sobic.002G299500 expressed protein -
11 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
12 Sobic.002G087200 OsFBX231 - F-box domain containing protein, expressed -
13 Sobic.005G050400 syntaxin 6, putative, expressed -
14 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
15 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.004G093100 protein kinase family protein, putative, expressed -
17 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
18 Sobic.004G298200 Plant VAMP (vesicle-associated membrane protein) family protein(PubMedID : 26465154)@MSP domain containing protein, expressed -
19 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
20 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic005G138800 Sobic005G138800 Sobic008G171900 Sobic008G171900 Sobic005G138800--Sobic008G171900 Sobic005G020600 Sobic005G020600 Sobic005G138800--Sobic005G020600 Sobic004G241300 Sobic004G241300 Sobic005G138800--Sobic004G241300 Sobic001G435700 Sobic001G435700 Sobic005G138800--Sobic001G435700 Sobic008G156600 Sobic008G156600 Sobic005G138800--Sobic008G156600 Sobic009G163100 Sobic009G163100 Sobic005G138800--Sobic009G163100 Sobic003G376900 Sobic003G376900 Sobic005G138800--Sobic003G376900 Sobic004G038400 Sobic004G038400 Sobic005G138800--Sobic004G038400 Sobic002G172401 Sobic002G172401 Sobic005G138800--Sobic002G172401 Sobic002G299500 Sobic002G299500 Sobic008G171900--Sobic002G299500 Sobic008G171900--Sobic009G163100 Sobic008G171900--Sobic004G241300 Sobic008G171900--Sobic001G435700 Sobic008G171900--Sobic008G156600 Sobic008G171900--Sobic005G020600 Sobic008G171900--Sobic003G376900 Sobic008G007600 Sobic008G007600 Sobic008G171900--Sobic008G007600 Sobic001G385300 Sobic001G385300 Sobic008G171900--Sobic001G385300 Sobic005G020600--Sobic009G163100 Sobic005G020600--Sobic002G299500 Sobic005G020600--Sobic008G156600 Sobic001G072000 Sobic001G072000 Sobic005G020600--Sobic001G072000 Sobic009G202000 Sobic009G202000 Sobic005G020600--Sobic009G202000 Sobic005G020600--Sobic008G171900 Sobic001G432200 Sobic001G432200 Sobic005G020600--Sobic001G432200 Sobic001G322400 Sobic001G322400 Sobic005G020600--Sobic001G322400 Sobic001G112600 Sobic001G112600 Sobic005G020600--Sobic001G112600 Sobic004G241300--Sobic008G171900 Sobic004G241300--Sobic008G156600 Sobic004G241300--Sobic009G163100 Sobic003G423700 Sobic003G423700 Sobic004G241300--Sobic003G423700 Sobic004G241300--Sobic001G435700 Sobic004G241300--Sobic005G020600 Sobic002G420100 Sobic002G420100 Sobic004G241300--Sobic002G420100 Sobic010G253200 Sobic010G253200 Sobic004G241300--Sobic010G253200 Sobic004G241300--Sobic002G172401 Sobic001G435700--Sobic008G171900 Sobic001G435700--Sobic009G163100 Sobic001G435700--Sobic008G156600 Sobic004G093100 Sobic004G093100 Sobic001G435700--Sobic004G093100 Sobic001G435700--Sobic005G020600 Sobic001G435700--Sobic004G241300 Sobic001G435700--Sobic003G376900 Sobic005G050400 Sobic005G050400 Sobic001G435700--Sobic005G050400 Sobic010G238300 Sobic010G238300 Sobic001G435700--Sobic010G238300 Sobic008G156600--Sobic009G163100 Sobic008G156600--Sobic005G050400 Sobic008G156600--Sobic001G072000 Sobic008G156600--Sobic001G112600 Sobic008G156600--Sobic005G020600 Sobic008G156600--Sobic008G171900 Sobic008G156600--Sobic004G241300 Sobic004G007400 Sobic004G007400 Sobic008G156600--Sobic004G007400 Sobic008G156600--Sobic001G322400 Sobic009G163100--Sobic008G156600 Sobic009G163100--Sobic005G020600 Sobic009G163100--Sobic008G171900 Sobic009G163100--Sobic001G072000 Sobic009G163100--Sobic002G299500 Sobic009G163100--Sobic005G050400 Sobic009G163100--Sobic001G435700 Sobic009G163100--Sobic001G112600 Sobic009G163100--Sobic001G322400 Sobic003G376900--Sobic002G299500 Sobic003G376900--Sobic009G163100 Sobic003G352900 Sobic003G352900 Sobic003G376900--Sobic003G352900 Sobic003G376900--Sobic008G171900 Sobic003G376900--Sobic001G385300 Sobic003G376900--Sobic005G020600 Sobic003G376900--Sobic001G435700 Sobic005G045800 Sobic005G045800 Sobic003G376900--Sobic005G045800 Sobic003G376900--Sobic001G072000 Sobic005G173700 Sobic005G173700 Sobic004G038400--Sobic005G173700 Sobic009G048700 Sobic009G048700 Sobic004G038400--Sobic009G048700 Sobic001G076600 Sobic001G076600 Sobic004G038400--Sobic001G076600 Sobic004G168900 Sobic004G168900 Sobic004G038400--Sobic004G168900 Sobic003G005700 Sobic003G005700 Sobic004G038400--Sobic003G005700 Sobic007G144100 Sobic007G144100 Sobic004G038400--Sobic007G144100 Sobic002G243400 Sobic002G243400 Sobic004G038400--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic004G038400--Sobic008G056600 Sobic009G002100 Sobic009G002100 Sobic004G038400--Sobic009G002100 Sobic002G172401--Sobic005G020600 Sobic002G172401--Sobic008G156600 Sobic002G172401--Sobic005G050400 Sobic002G172401--Sobic009G163100 Sobic002G172401--Sobic001G072000 Sobic002G172401--Sobic001G112600 Sobic004G113600 Sobic004G113600 Sobic002G172401--Sobic004G113600 Sobic004G062200 Sobic004G062200 Sobic002G172401--Sobic004G062200 Sobic004G279200 Sobic004G279200 Sobic002G172401--Sobic004G279200
Octagon: transcription factors


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