Gene annotation
Transcriptome id Sobic.001G349100.2
Synonym Sb01g033410, ATOCT3, 3-Oct
Functional annotation Cation/carnitine transporter 3( (PubMedID : 26759170,(PubMedID : 24597475)
organic cation transporter-related, putative, expressed
UniProt A0A1B6QPA9
Pfam PF07690
Panther DB PTHR24064 PTHR24064:SF172
NCBI CDD KOG0255; Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G16390 : organic cation/carnitine transporter 3
RAP-DB (Rice) LOC_Os07g37510.1 : organic cation transporter-related, putative, expressed
MaizeGDB (Corn) Zm00025a046901 , Zm00025a048386
Brachypodium KQK15764
Barley HORVU2Hr1G040790.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G026500 expressed protein -
2 Sobic.001G162233 - -
3 Sobic.006G268500 transporter family protein, putative, expressed -
4 Sobic.009G071000 HAD superfamily phosphatase, putative, expressed -
5 Sobic.008G140900 expressed protein -
6 Sobic.002G422300 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
7 Sobic.009G157450 - -
8 Sobic.008G158332 - -
9 Sobic.002G010900 expressed protein -
10 Sobic.006G227750 - -
11 Sobic.006G234900 expressed protein -
12 Sobic.006G101300 expressed protein -
13 Sobic.010G043900 expressed protein -
14 Sobic.007G074800 O-methyltransferase, putative, expressed -
15 Sobic.001G114900 - -
16 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
17 Sobic.004G161751 - -
18 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.001G188800 cysteine-rich repeat secretory protein 55 precursor, putative, expressed -
20 Sobic.003G073460 - -


Gene co-expression network
sample Sobic001G349100 Sobic001G349100 Sobic006G026500 Sobic006G026500 Sobic001G349100--Sobic006G026500 Sobic001G162233 Sobic001G162233 Sobic001G349100--Sobic001G162233 Sobic006G268500 Sobic006G268500 Sobic001G349100--Sobic006G268500 Sobic009G071000 Sobic009G071000 Sobic001G349100--Sobic009G071000 Sobic008G140900 Sobic008G140900 Sobic001G349100--Sobic008G140900 Sobic002G422300 Sobic002G422300 Sobic001G349100--Sobic002G422300 Sobic009G157450 Sobic009G157450 Sobic001G349100--Sobic009G157450 Sobic008G158332 Sobic008G158332 Sobic001G349100--Sobic008G158332 Sobic002G010900 Sobic002G010900 Sobic001G349100--Sobic002G010900 Sobic006G234900 Sobic006G234900 Sobic006G026500--Sobic006G234900 Sobic006G101300 Sobic006G101300 Sobic006G026500--Sobic006G101300 Sobic002G044600 Sobic002G044600 Sobic006G026500--Sobic002G044600 Sobic006G026500--Sobic002G422300 Sobic001G188800 Sobic001G188800 Sobic006G026500--Sobic001G188800 Sobic006G026500--Sobic002G010900 Sobic001G062132 Sobic001G062132 Sobic006G026500--Sobic001G062132 Sobic002G012300 Sobic002G012300 Sobic006G026500--Sobic002G012300 Sobic006G026500--Sobic008G140900 Sobic004G292600 Sobic004G292600 Sobic001G162233--Sobic004G292600 Sobic005G011900 Sobic005G011900 Sobic001G162233--Sobic005G011900 Sobic008G158600 Sobic008G158600 Sobic001G162233--Sobic008G158600 Sobic001G162233--Sobic002G012300 Sobic010G156400 Sobic010G156400 Sobic001G162233--Sobic010G156400 Sobic008G158501 Sobic008G158501 Sobic001G162233--Sobic008G158501 Sobic001G539300 Sobic001G539300 Sobic001G162233--Sobic001G539300 Sobic006G268500--Sobic009G071000 Sobic006G268500--Sobic008G140900 Sobic006G268500--Sobic009G157450 Sobic006G227750 Sobic006G227750 Sobic006G268500--Sobic006G227750 Sobic006G268500--Sobic008G158332 Sobic006G268500--Sobic002G422300 Sobic006G268500--Sobic002G010900 Sobic006G268500--Sobic006G234900 Sobic006G268500--Sobic006G026500 Sobic009G071000--Sobic006G268500 Sobic009G071000--Sobic008G140900 Sobic009G071000--Sobic002G422300 Sobic009G071000--Sobic002G010900 Sobic009G071000--Sobic006G227750 Sobic009G071000--Sobic009G157450 Sobic009G071000--Sobic008G158332 Sobic009G071100 Sobic009G071100 Sobic009G071000--Sobic009G071100 Sobic009G071000--Sobic006G234900 Sobic008G140900--Sobic006G268500 Sobic008G140900--Sobic009G157450 Sobic008G140900--Sobic009G071000 Sobic008G140900--Sobic008G158332 Sobic008G140900--Sobic006G227750 Sobic008G140900--Sobic002G422300 Sobic008G140900--Sobic001G162233 Sobic008G140900--Sobic006G026500 Sobic008G140900--Sobic002G010900 Sobic010G043900 Sobic010G043900 Sobic002G422300--Sobic010G043900 Sobic002G422300--Sobic008G158332 Sobic002G422300--Sobic002G010900 Sobic001G114900 Sobic001G114900 Sobic002G422300--Sobic001G114900 Sobic002G422300--Sobic006G268500 Sobic002G422300--Sobic009G071000 Sobic008G027600 Sobic008G027600 Sobic002G422300--Sobic008G027600 Sobic002G422300--Sobic006G101300 Sobic003G026400 Sobic003G026400 Sobic002G422300--Sobic003G026400 Sobic009G157450--Sobic008G140900 Sobic009G157450--Sobic006G268500 Sobic009G157450--Sobic006G227750 Sobic009G157450--Sobic009G071000 Sobic009G157450--Sobic008G158332 Sobic009G157450--Sobic002G422300 Sobic009G157450--Sobic006G026500 Sobic009G157450--Sobic006G234900 Sobic009G157450--Sobic002G010900 Sobic008G158332--Sobic002G422300 Sobic008G158332--Sobic006G268500 Sobic008G158332--Sobic001G114900 Sobic008G158332--Sobic008G140900 Sobic008G158332--Sobic002G010900 Sobic008G158332--Sobic008G027600 Sobic008G158332--Sobic009G071000 Sobic008G158332--Sobic010G043900 Sobic003G073460 Sobic003G073460 Sobic008G158332--Sobic003G073460 Sobic002G010900--Sobic001G114900 Sobic005G110454 Sobic005G110454 Sobic002G010900--Sobic005G110454 Sobic002G010900--Sobic002G422300 Sobic005G110451 Sobic005G110451 Sobic002G010900--Sobic005G110451 Sobic008G022000 Sobic008G022000 Sobic002G010900--Sobic008G022000 Sobic002G010900--Sobic006G101300 Sobic005G177600 Sobic005G177600 Sobic002G010900--Sobic005G177600 Sobic002G010900--Sobic009G071000 Sobic002G010900--Sobic008G158332
Octagon: transcription factors


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