Gene annotation
Transcriptome id Sobic.001G517100.4,Sobic.001G517100.3,Sobic.001G517100.1,Sobic.001G517100.2
Synonym Sb01g048230
Functional annotation CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1Z5SC22 , A0A1Z5SBP6 , A0A1Z5SBV9 , C5WZV7
Pfam PF00036
Panther DB PTHR10183 PTHR10183:SF323
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily) KOG0037Ca2+-binding protein, EF-Hand protein superfamily
KEGG Orthology -
Gene Ontology GO:0005509; calcium ion binding


Orthologs (automatic annotation)
TAIR AT5G04870 : calcium dependent protein kinase 1,Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os12g04240.1,LOC_Os11g04480.1,LOC_Os03g59390.1 : CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed,peflin, putative, expressed
MaizeGDB (Corn) Zm00025a000451
Brachypodium -
Barley HORVU4Hr1G082010.2
Wheat TraesCS4B02G326100 , TraesCS4B02G326100 , TraesCS5A02G498300 , TraesCS4D02G323000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G182600 protein phosphatase 2C containing protein, expressed -
2 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
3 Sobic.010G220700 aluminum-activated malate transporter, putative, expressed -
4 Sobic.004G193700 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
5 Sobic.010G013800 START domain containing protein, expressed -
6 Sobic.001G096833 - -
7 Sobic.001G318432 - -
8 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
9 Sobic.006G092000 expressed protein K18172: COX assembly mitochondrial protein 2
10 Sobic.007G194300 sulfite oxidase, putative, expressed K00387: sulfite oxidase
11 Sobic.004G359800 inositol-1-monophosphatase, putative, expressed -
12 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
13 Sobic.010G176550 - -
14 Sobic.010G005600 SEC14 cytosolic factor family protein, putative, expressed -
15 Sobic.003G262200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
16 Sobic.001G261573 - -
17 Sobic.004G122600 VHS and GAT domain containing protein, expressed -
18 Sobic.001G159400 protein kinase domain containing protein, expressed -
19 Sobic.002G143500 sulfate transporter 4.1, chloroplast precursor, putative, expressed K18059: sulfate transporter 4
20 Sobic.004G253050 - -


Gene co-expression network
sample Sobic001G517100 Sobic001G517100 Sobic003G182600 Sobic003G182600 Sobic001G517100--Sobic003G182600 Sobic003G138500 Sobic003G138500 Sobic001G517100--Sobic003G138500 Sobic010G220700 Sobic010G220700 Sobic001G517100--Sobic010G220700 Sobic004G193700 Sobic004G193700 Sobic001G517100--Sobic004G193700 Sobic010G013800 Sobic010G013800 Sobic001G517100--Sobic010G013800 Sobic001G096833 Sobic001G096833 Sobic001G517100--Sobic001G096833 Sobic001G318432 Sobic001G318432 Sobic001G517100--Sobic001G318432 Sobic007G116200 Sobic007G116200 Sobic001G517100--Sobic007G116200 Sobic006G092000 Sobic006G092000 Sobic001G517100--Sobic006G092000 Sobic009G132100 Sobic009G132100 Sobic003G182600--Sobic009G132100 Sobic008G001200 Sobic008G001200 Sobic003G182600--Sobic008G001200 Sobic003G182600--Sobic007G116200 Sobic003G155100 Sobic003G155100 Sobic003G182600--Sobic003G155100 Sobic001G375100 Sobic001G375100 Sobic003G182600--Sobic001G375100 Sobic001G527800 Sobic001G527800 Sobic003G182600--Sobic001G527800 Sobic002G345700 Sobic002G345700 Sobic003G182600--Sobic002G345700 Sobic001G194200 Sobic001G194200 Sobic003G182600--Sobic001G194200 Sobic003G205200 Sobic003G205200 Sobic003G182600--Sobic003G205200 Sobic002G127550 Sobic002G127550 Sobic003G138500--Sobic002G127550 Sobic001G159400 Sobic001G159400 Sobic003G138500--Sobic001G159400 Sobic004G034800 Sobic004G034800 Sobic003G138500--Sobic004G034800 Sobic004G359800 Sobic004G359800 Sobic003G138500--Sobic004G359800 Sobic010G176550 Sobic010G176550 Sobic003G138500--Sobic010G176550 Sobic003G138500--Sobic007G116200 Sobic002G276100 Sobic002G276100 Sobic003G138500--Sobic002G276100 Sobic003G381200 Sobic003G381200 Sobic003G138500--Sobic003G381200 Sobic001G186800 Sobic001G186800 Sobic003G138500--Sobic001G186800 Sobic001G422600 Sobic001G422600 Sobic010G220700--Sobic001G422600 Sobic010G220700--Sobic009G132100 Sobic010G220700--Sobic001G517100 Sobic008G173800 Sobic008G173800 Sobic010G220700--Sobic008G173800 Sobic006G226900 Sobic006G226900 Sobic010G220700--Sobic006G226900 Sobic010G220700--Sobic003G182600 Sobic006G045200 Sobic006G045200 Sobic010G220700--Sobic006G045200 Sobic010G131000 Sobic010G131000 Sobic010G220700--Sobic010G131000 Sobic003G019600 Sobic003G019600 Sobic010G220700--Sobic003G019600 Sobic002G091600 Sobic002G091600 Sobic004G193700--Sobic002G091600 Sobic003G262200 Sobic003G262200 Sobic004G193700--Sobic003G262200 Sobic003G229300 Sobic003G229300 Sobic004G193700--Sobic003G229300 Sobic004G193700--Sobic006G092000 Sobic003G253600 Sobic003G253600 Sobic004G193700--Sobic003G253600 Sobic003G119600 Sobic003G119600 Sobic004G193700--Sobic003G119600 Sobic005G059800 Sobic005G059800 Sobic004G193700--Sobic005G059800 Sobic001G085600 Sobic001G085600 Sobic004G193700--Sobic001G085600 Sobic006G185100 Sobic006G185100 Sobic004G193700--Sobic006G185100 Sobic004G341900 Sobic004G341900 Sobic010G013800--Sobic004G341900 Sobic003G029700 Sobic003G029700 Sobic010G013800--Sobic003G029700 Sobic008G188900 Sobic008G188900 Sobic010G013800--Sobic008G188900 Sobic010G013800--Sobic001G318432 Sobic001G214300 Sobic001G214300 Sobic010G013800--Sobic001G214300 Sobic009G191000 Sobic009G191000 Sobic010G013800--Sobic009G191000 Sobic010G013800--Sobic003G229300 Sobic006G048600 Sobic006G048600 Sobic010G013800--Sobic006G048600 Sobic002G411600 Sobic002G411600 Sobic010G013800--Sobic002G411600 Sobic007G194300 Sobic007G194300 Sobic001G096833--Sobic007G194300 Sobic010G005600 Sobic010G005600 Sobic001G096833--Sobic010G005600 Sobic003G383300 Sobic003G383300 Sobic001G096833--Sobic003G383300 Sobic001G048766 Sobic001G048766 Sobic001G096833--Sobic001G048766 Sobic001G096833--Sobic004G359800 Sobic006G058100 Sobic006G058100 Sobic001G096833--Sobic006G058100 Sobic003G161000 Sobic003G161000 Sobic001G096833--Sobic003G161000 Sobic001G354501 Sobic001G354501 Sobic001G096833--Sobic001G354501 Sobic001G096833--Sobic003G138500 Sobic001G318432--Sobic001G214300 Sobic001G318432--Sobic006G048600 Sobic001G318432--Sobic003G029700 Sobic006G228500 Sobic006G228500 Sobic001G318432--Sobic006G228500 Sobic001G318432--Sobic004G341900 Sobic006G048500 Sobic006G048500 Sobic001G318432--Sobic006G048500 Sobic003G429650 Sobic003G429650 Sobic001G318432--Sobic003G429650 Sobic002G006900 Sobic002G006900 Sobic001G318432--Sobic002G006900 Sobic006G182900 Sobic006G182900 Sobic001G318432--Sobic006G182900 Sobic006G216800 Sobic006G216800 Sobic007G116200--Sobic006G216800 Sobic010G010700 Sobic010G010700 Sobic007G116200--Sobic010G010700 Sobic002G134200 Sobic002G134200 Sobic007G116200--Sobic002G134200 Sobic007G116200--Sobic006G182900 Sobic007G116200--Sobic004G359800 Sobic010G139000 Sobic010G139000 Sobic007G116200--Sobic010G139000 Sobic010G256700 Sobic010G256700 Sobic007G116200--Sobic010G256700 Sobic004G209600 Sobic004G209600 Sobic007G116200--Sobic004G209600 Sobic003G280800 Sobic003G280800 Sobic007G116200--Sobic003G280800 Sobic003G110800 Sobic003G110800 Sobic006G092000--Sobic003G110800 Sobic005G100600 Sobic005G100600 Sobic006G092000--Sobic005G100600 Sobic006G092000--Sobic004G193700 Sobic006G092000--Sobic005G059800 Sobic006G092000--Sobic003G229300 Sobic006G173600 Sobic006G173600 Sobic006G092000--Sobic006G173600 Sobic008G115900 Sobic008G115900 Sobic006G092000--Sobic008G115900 Sobic006G092000--Sobic002G091600 Sobic001G516901 Sobic001G516901 Sobic006G092000--Sobic001G516901
Octagon: transcription factors


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