Gene annotation
Transcriptome id Sobic.002G029400.1
Synonym NAC042, Sb02g002620, anac042
Functional annotation no apical meristem protein, putative, expressed
UniProt C5X9F0
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G43000 : NAC domain containing protein 42
RAP-DB (Rice) LOC_Os03g56580.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a016671 , Zm00025a008395 , Zm00025a005111 , Zm00025a004806
Brachypodium KQK12943 , KQK20999
Barley HORVU5Hr1G099390.3 , HORVU5Hr1G099390.2 , HORVU5Hr1G099470.1 , HORVU5Hr1G099470.2 , HORVU5Hr1G099470.3 , HORVU5Hr1G099470.4 , HORVU5Hr1G099470.5 , HORVU5Hr1G099460.5 , HORVU5Hr1G099460.4 , HORVU5Hr1G099460.3 , HORVU5Hr1G099460.2 , HORVU5Hr1G099460.1
Wheat TraesCS5B02G415600 , TraesCS5A02G411700 , TraesCS5B02G415400 , TraesCS5B02G415700 , TraesCS5D02G421000 , TraesCS5D02G421000 , TraesCS5A02G411900 , TraesCS5D02G420800 , TraesCS4B02G384700 , TraesCS5A02G411800 , TraesCS5D02G421100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G325800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
2 Sobic.003G039600 expressed protein -
3 Sobic.007G149800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
4 Sobic.005G066600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
5 Sobic.001G457466 - -
6 Sobic.002G327400 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.001G318000 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.008G077550 - -
9 Sobic.002G232800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
10 Sobic.003G029400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@avr9/Cf-9 rapidly elicited protein 146, putative, expressed -
11 Sobic.004G311000 integral membrane protein DUF6 containing protein, expressed -
12 Sobic.007G110900 expressed protein -
13 Sobic.010G135100 expressed protein -
14 Sobic.005G180500 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.002G327201 - -
16 Sobic.009G002400 polygalacturonase inhibitor precursor, putative, expressed -
17 Sobic.004G301400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K08331: autophagy-related protein 13
18 Sobic.008G016000 major facilitator superfamily antiporter, putative, expressed -
19 Sobic.005G223450 - -
20 Sobic.002G368901 - -


Gene co-expression network
sample Sobic002G029400 Sobic002G029400 Sobic002G325800 Sobic002G325800 Sobic002G029400--Sobic002G325800 Sobic003G039600 Sobic003G039600 Sobic002G029400--Sobic003G039600 Sobic007G149800 Sobic007G149800 Sobic002G029400--Sobic007G149800 Sobic005G066600 Sobic005G066600 Sobic002G029400--Sobic005G066600 Sobic001G457466 Sobic001G457466 Sobic002G029400--Sobic001G457466 Sobic002G327400 Sobic002G327400 Sobic002G029400--Sobic002G327400 Sobic001G318000 Sobic001G318000 Sobic002G029400--Sobic001G318000 Sobic008G077550 Sobic008G077550 Sobic002G029400--Sobic008G077550 Sobic002G232800 Sobic002G232800 Sobic002G029400--Sobic002G232800 Sobic002G325800--Sobic003G039600 Sobic007G157900 Sobic007G157900 Sobic002G325800--Sobic007G157900 Sobic002G325800--Sobic002G232800 Sobic002G325800--Sobic007G149800 Sobic002G024000 Sobic002G024000 Sobic002G325800--Sobic002G024000 Sobic005G211400 Sobic005G211400 Sobic002G325800--Sobic005G211400 Sobic004G076100 Sobic004G076100 Sobic002G325800--Sobic004G076100 Sobic004G232400 Sobic004G232400 Sobic002G325800--Sobic004G232400 Sobic009G241700 Sobic009G241700 Sobic002G325800--Sobic009G241700 Sobic009G002400 Sobic009G002400 Sobic003G039600--Sobic009G002400 Sobic006G274933 Sobic006G274933 Sobic003G039600--Sobic006G274933 Sobic003G039600--Sobic007G149800 Sobic003G411200 Sobic003G411200 Sobic003G039600--Sobic003G411200 Sobic001G238800 Sobic001G238800 Sobic003G039600--Sobic001G238800 Sobic009G106400 Sobic009G106400 Sobic003G039600--Sobic009G106400 Sobic007G090460 Sobic007G090460 Sobic003G039600--Sobic007G090460 Sobic007G218800 Sobic007G218800 Sobic003G039600--Sobic007G218800 Sobic010G088800 Sobic010G088800 Sobic003G039600--Sobic010G088800 Sobic007G149800--Sobic003G039600 Sobic010G135100 Sobic010G135100 Sobic007G149800--Sobic010G135100 Sobic005G110406 Sobic005G110406 Sobic007G149800--Sobic005G110406 Sobic004G171700 Sobic004G171700 Sobic007G149800--Sobic004G171700 Sobic004G229400 Sobic004G229400 Sobic007G149800--Sobic004G229400 Sobic007G149800--Sobic007G090460 Sobic007G149800--Sobic003G411200 Sobic007G149800--Sobic008G077550 Sobic007G149900 Sobic007G149900 Sobic007G149800--Sobic007G149900 Sobic001G086000 Sobic001G086000 Sobic005G066600--Sobic001G086000 Sobic005G223450 Sobic005G223450 Sobic005G066600--Sobic005G223450 Sobic005G066600--Sobic002G327400 Sobic004G121700 Sobic004G121700 Sobic005G066600--Sobic004G121700 Sobic010G151200 Sobic010G151200 Sobic005G066600--Sobic010G151200 Sobic003G112400 Sobic003G112400 Sobic005G066600--Sobic003G112400 Sobic003G405300 Sobic003G405300 Sobic005G066600--Sobic003G405300 Sobic002G327201 Sobic002G327201 Sobic005G066600--Sobic002G327201 Sobic005G066600--Sobic010G135100 Sobic001G457466--Sobic002G029400 Sobic008G076500 Sobic008G076500 Sobic001G457466--Sobic008G076500 Sobic005G192500 Sobic005G192500 Sobic001G457466--Sobic005G192500 Sobic010G076100 Sobic010G076100 Sobic001G457466--Sobic010G076100 Sobic006G153700 Sobic006G153700 Sobic001G457466--Sobic006G153700 Sobic004G159733 Sobic004G159733 Sobic001G457466--Sobic004G159733 Sobic005G067500 Sobic005G067500 Sobic001G457466--Sobic005G067500 Sobic001G353600 Sobic001G353600 Sobic001G457466--Sobic001G353600 Sobic010G182200 Sobic010G182200 Sobic001G457466--Sobic010G182200 Sobic002G327400--Sobic003G112400 Sobic003G060100 Sobic003G060100 Sobic002G327400--Sobic003G060100 Sobic002G327400--Sobic002G327201 Sobic001G487500 Sobic001G487500 Sobic002G327400--Sobic001G487500 Sobic002G327400--Sobic001G086000 Sobic002G238600 Sobic002G238600 Sobic002G327400--Sobic002G238600 Sobic002G327400--Sobic010G135100 Sobic002G234400 Sobic002G234400 Sobic002G327400--Sobic002G234400 Sobic002G327400--Sobic008G077550 Sobic010G106500 Sobic010G106500 Sobic001G318000--Sobic010G106500 Sobic001G318000--Sobic001G238800 Sobic002G416900 Sobic002G416900 Sobic001G318000--Sobic002G416900 Sobic001G318000--Sobic009G106400 Sobic003G269600 Sobic003G269600 Sobic001G318000--Sobic003G269600 Sobic010G271200 Sobic010G271200 Sobic001G318000--Sobic010G271200 Sobic003G360600 Sobic003G360600 Sobic001G318000--Sobic003G360600 Sobic003G093700 Sobic003G093700 Sobic001G318000--Sobic003G093700 Sobic001G318000--Sobic003G411200 Sobic005G180500 Sobic005G180500 Sobic008G077550--Sobic005G180500 Sobic008G077550--Sobic002G238600 Sobic004G229500 Sobic004G229500 Sobic008G077550--Sobic004G229500 Sobic008G077550--Sobic003G060100 Sobic008G077550--Sobic004G229400 Sobic006G277800 Sobic006G277800 Sobic008G077550--Sobic006G277800 Sobic006G187900 Sobic006G187900 Sobic008G077550--Sobic006G187900 Sobic008G077550--Sobic010G135100 Sobic005G013500 Sobic005G013500 Sobic008G077550--Sobic005G013500 Sobic010G102000 Sobic010G102000 Sobic002G232800--Sobic010G102000 Sobic003G341100 Sobic003G341100 Sobic002G232800--Sobic003G341100 Sobic009G217500 Sobic009G217500 Sobic002G232800--Sobic009G217500 Sobic001G341600 Sobic001G341600 Sobic002G232800--Sobic001G341600 Sobic007G077100 Sobic007G077100 Sobic002G232800--Sobic007G077100 Sobic010G023200 Sobic010G023200 Sobic002G232800--Sobic010G023200 Sobic010G071000 Sobic010G071000 Sobic002G232800--Sobic010G071000 Sobic010G209100 Sobic010G209100 Sobic002G232800--Sobic010G209100 Sobic007G090300 Sobic007G090300 Sobic002G232800--Sobic007G090300
Octagon: transcription factors


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