Gene annotation
Transcriptome id Sobic.002G041300.1
Synonym Sb02g003540
Functional annotation expressed protein
UniProt C5XA86
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g43990.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G041400 ATP/GTP binding protein, putative, expressed -
2 Sobic.010G084600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
3 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
4 Sobic.001G208800 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
5 Sobic.007G067350 - -
6 Sobic.001G365100 lipase, putative, expressed -
7 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
8 Sobic.007G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
9 Sobic.001G279701 - -
10 Sobic.003G191500 protein transport protein Sec61 subunit beta, putative, expressed K09481: SEC61B, protein transport protein SEC61 subunit beta
11 Sobic.003G307300 - -
12 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
13 Sobic.003G082200 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
14 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
15 Sobic.002G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.004G168100 OsMADS89 - MADS-box family gene with M-gamma type-box, expressed -
17 Sobic.003G082100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
18 Sobic.002G290500 armadillo/beta-catenin repeat protein-related, putative, expressed -
19 Sobic.001G357100 ZOS9-11 - C2H2 zinc finger protein, expressed -
20 Sobic.001G348700 - -


Gene co-expression network
sample Sobic002G041300 Sobic002G041300 Sobic002G041400 Sobic002G041400 Sobic002G041300--Sobic002G041400 Sobic010G084600 Sobic010G084600 Sobic002G041300--Sobic010G084600 Sobic008G140300 Sobic008G140300 Sobic002G041300--Sobic008G140300 Sobic001G208800 Sobic001G208800 Sobic002G041300--Sobic001G208800 Sobic007G067350 Sobic007G067350 Sobic002G041300--Sobic007G067350 Sobic001G365100 Sobic001G365100 Sobic002G041300--Sobic001G365100 Sobic006G084600 Sobic006G084600 Sobic002G041300--Sobic006G084600 Sobic007G067400 Sobic007G067400 Sobic002G041300--Sobic007G067400 Sobic001G279701 Sobic001G279701 Sobic002G041300--Sobic001G279701 Sobic002G041400--Sobic008G140300 Sobic002G041400--Sobic002G041300 Sobic002G041400--Sobic001G208800 Sobic002G041400--Sobic007G067350 Sobic002G041400--Sobic010G084600 Sobic002G041400--Sobic006G084600 Sobic001G348700 Sobic001G348700 Sobic002G041400--Sobic001G348700 Sobic002G041400--Sobic007G067400 Sobic004G221500 Sobic004G221500 Sobic002G041400--Sobic004G221500 Sobic002G184200 Sobic002G184200 Sobic010G084600--Sobic002G184200 Sobic003G307300 Sobic003G307300 Sobic010G084600--Sobic003G307300 Sobic010G084600--Sobic006G084600 Sobic010G084600--Sobic004G221500 Sobic004G037000 Sobic004G037000 Sobic010G084600--Sobic004G037000 Sobic007G155200 Sobic007G155200 Sobic010G084600--Sobic007G155200 Sobic002G361100 Sobic002G361100 Sobic010G084600--Sobic002G361100 Sobic009G224100 Sobic009G224100 Sobic010G084600--Sobic009G224100 Sobic010G084600--Sobic001G365100 Sobic008G140300--Sobic007G067350 Sobic008G140300--Sobic001G348700 Sobic008G140300--Sobic006G084600 Sobic002G183100 Sobic002G183100 Sobic008G140300--Sobic002G183100 Sobic008G140300--Sobic007G067400 Sobic008G140300--Sobic004G221500 Sobic007G066932 Sobic007G066932 Sobic008G140300--Sobic007G066932 Sobic008G140300--Sobic010G084600 Sobic010G084300 Sobic010G084300 Sobic008G140300--Sobic010G084300 Sobic001G208800--Sobic002G041400 Sobic001G208800--Sobic002G041300 Sobic010G007200 Sobic010G007200 Sobic001G208800--Sobic010G007200 Sobic010G035700 Sobic010G035700 Sobic001G208800--Sobic010G035700 Sobic006G275300 Sobic006G275300 Sobic001G208800--Sobic006G275300 Sobic010G102100 Sobic010G102100 Sobic001G208800--Sobic010G102100 Sobic001G208800--Sobic007G067350 Sobic003G176350 Sobic003G176350 Sobic001G208800--Sobic003G176350 Sobic001G208800--Sobic003G307300 Sobic007G067350--Sobic007G066932 Sobic002G195400 Sobic002G195400 Sobic007G067350--Sobic002G195400 Sobic003G426100 Sobic003G426100 Sobic007G067350--Sobic003G426100 Sobic007G067350--Sobic006G084600 Sobic010G102300 Sobic010G102300 Sobic007G067350--Sobic010G102300 Sobic007G067350--Sobic008G140300 Sobic007G067350--Sobic010G084300 Sobic001G319700 Sobic001G319700 Sobic007G067350--Sobic001G319700 Sobic007G067350--Sobic010G035700 Sobic010G259500 Sobic010G259500 Sobic001G365100--Sobic010G259500 Sobic007G155100 Sobic007G155100 Sobic001G365100--Sobic007G155100 Sobic004G229800 Sobic004G229800 Sobic001G365100--Sobic004G229800 Sobic007G039600 Sobic007G039600 Sobic001G365100--Sobic007G039600 Sobic001G365100--Sobic006G084600 Sobic007G057000 Sobic007G057000 Sobic001G365100--Sobic007G057000 Sobic003G317100 Sobic003G317100 Sobic001G365100--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic001G365100--Sobic003G437200 Sobic010G066700 Sobic010G066700 Sobic001G365100--Sobic010G066700 Sobic006G084600--Sobic004G221500 Sobic006G084600--Sobic007G067350 Sobic006G084600--Sobic007G155100 Sobic006G084600--Sobic003G317100 Sobic006G084600--Sobic003G437200 Sobic006G084600--Sobic007G066932 Sobic006G084600--Sobic001G348700 Sobic006G084600--Sobic010G084300 Sobic001G231600 Sobic001G231600 Sobic006G084600--Sobic001G231600 Sobic007G067400--Sobic002G184200 Sobic010G084100 Sobic010G084100 Sobic007G067400--Sobic010G084100 Sobic007G067400--Sobic004G221500 Sobic007G067400--Sobic010G084300 Sobic007G067400--Sobic006G084600 Sobic005G045900 Sobic005G045900 Sobic007G067400--Sobic005G045900 Sobic007G067400--Sobic008G140300 Sobic007G067400--Sobic001G348700 Sobic007G067400--Sobic007G155100 Sobic004G352000 Sobic004G352000 Sobic001G279701--Sobic004G352000 Sobic003G370600 Sobic003G370600 Sobic001G279701--Sobic003G370600 Sobic006G170000 Sobic006G170000 Sobic001G279701--Sobic006G170000 Sobic004G228500 Sobic004G228500 Sobic001G279701--Sobic004G228500 Sobic010G063033 Sobic010G063033 Sobic001G279701--Sobic010G063033 Sobic001G279701--Sobic002G184200 Sobic001G440200 Sobic001G440200 Sobic001G279701--Sobic001G440200 Sobic008G187001 Sobic008G187001 Sobic001G279701--Sobic008G187001 Sobic009G144600 Sobic009G144600 Sobic001G279701--Sobic009G144600
Octagon: transcription factors


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