Gene annotation
Transcriptome id Sobic.002G042400.1
Synonym Sb02g003640
Functional annotation FAD-linked oxidoreductase protein, putative, expressed
UniProt C5XA95
Pfam PF01565 PF02913
Panther DB PTHR11748 PTHR11748:SF35
NCBI CDD KOG1231; Proteins containing the FAD binding domain
KEGG Orthology K00102; LDHD, D-lactate dehydrogenase (cytochrome)
Gene Ontology GO:0016491; oxidoreductase activity GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G06580 : FAD-linked oxidases family protein
RAP-DB (Rice) LOC_Os07g06890.1 : FAD-linked oxidoreductase protein, putative, expressed
MaizeGDB (Corn) Zm00025a016129 , Zm00025a016130
Brachypodium KQK20806
Barley HORVU2Hr1G079300.3 , HORVU2Hr1G079300.2 , HORVU2Hr1G079300.1 , HORVU2Hr1G079300.6 , HORVU2Hr1G079300.5 , HORVU2Hr1G079300.4
Wheat TraesCS2A02G247000 , TraesCS2D02G249400 , TraesCS2D02G249400 , TraesCS2D02G249400 , TraesCS6D02G336600 , TraesCS2B02G263200 , TraesCS6A02G354300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G217600 E2F-related protein, putative, expressed -
2 Sobic.002G072300 5-nucleotidase surE, putative, expressed K03787: 5'-nucleotidase
3 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
4 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
5 Sobic.001G415700 expressed protein -
6 Sobic.001G116500 phosphoglucomutase, putative, expressed K01835: phosphoglucomutase
7 Sobic.010G112800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
8 Sobic.010G202300 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.002G291400 nicotinate-nucleotide pyrophosphorylase, putative, expressed K00767: nadC, nicotinate-nucleotide pyrophosphorylase (carboxylating)
10 Sobic.001G143200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane protein 56, putative, expressed -
11 Sobic.008G151366 - -
12 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
13 Sobic.004G130300 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
14 Sobic.002G148900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
15 Sobic.007G211800 kinase, pfkB family, putative, expressed -
16 Sobic.008G000400 GHMP kinases ATP-binding protein, putative, expressed K16190: glucuronokinase
17 Sobic.008G137901 - -
18 Sobic.006G176500 expressed protein -
19 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
20 Sobic.004G307400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase


Gene co-expression network
sample Sobic002G042400 Sobic002G042400 Sobic002G217600 Sobic002G217600 Sobic002G042400--Sobic002G217600 Sobic002G072300 Sobic002G072300 Sobic002G042400--Sobic002G072300 Sobic001G462200 Sobic001G462200 Sobic002G042400--Sobic001G462200 Sobic002G301200 Sobic002G301200 Sobic002G042400--Sobic002G301200 Sobic001G415700 Sobic001G415700 Sobic002G042400--Sobic001G415700 Sobic001G116500 Sobic001G116500 Sobic002G042400--Sobic001G116500 Sobic010G112800 Sobic010G112800 Sobic002G042400--Sobic010G112800 Sobic010G202300 Sobic010G202300 Sobic002G042400--Sobic010G202300 Sobic002G291400 Sobic002G291400 Sobic002G042400--Sobic002G291400 Sobic005G117300 Sobic005G117300 Sobic002G217600--Sobic005G117300 Sobic006G091300 Sobic006G091300 Sobic002G217600--Sobic006G091300 Sobic004G301200 Sobic004G301200 Sobic002G217600--Sobic004G301200 Sobic002G304100 Sobic002G304100 Sobic002G217600--Sobic002G304100 Sobic010G204900 Sobic010G204900 Sobic002G217600--Sobic010G204900 Sobic002G217600--Sobic010G202300 Sobic003G267500 Sobic003G267500 Sobic002G217600--Sobic003G267500 Sobic003G162900 Sobic003G162900 Sobic002G217600--Sobic003G162900 Sobic003G265500 Sobic003G265500 Sobic002G217600--Sobic003G265500 Sobic003G113300 Sobic003G113300 Sobic002G072300--Sobic003G113300 Sobic009G260700 Sobic009G260700 Sobic002G072300--Sobic009G260700 Sobic006G103700 Sobic006G103700 Sobic002G072300--Sobic006G103700 Sobic006G170900 Sobic006G170900 Sobic002G072300--Sobic006G170900 Sobic002G014800 Sobic002G014800 Sobic002G072300--Sobic002G014800 Sobic003G085500 Sobic003G085500 Sobic002G072300--Sobic003G085500 Sobic005G178300 Sobic005G178300 Sobic002G072300--Sobic005G178300 Sobic003G005900 Sobic003G005900 Sobic002G072300--Sobic003G005900 Sobic001G533100 Sobic001G533100 Sobic002G072300--Sobic001G533100 Sobic001G486700 Sobic001G486700 Sobic001G462200--Sobic001G486700 Sobic003G378400 Sobic003G378400 Sobic001G462200--Sobic003G378400 Sobic009G124000 Sobic009G124000 Sobic001G462200--Sobic009G124000 Sobic004G018000 Sobic004G018000 Sobic001G462200--Sobic004G018000 Sobic004G016400 Sobic004G016400 Sobic001G462200--Sobic004G016400 Sobic007G208300 Sobic007G208300 Sobic001G462200--Sobic007G208300 Sobic001G462200--Sobic001G116500 Sobic003G193700 Sobic003G193700 Sobic001G462200--Sobic003G193700 Sobic008G004300 Sobic008G004300 Sobic001G462200--Sobic008G004300 Sobic005G004100 Sobic005G004100 Sobic002G301200--Sobic005G004100 Sobic002G301200--Sobic001G486700 Sobic003G420900 Sobic003G420900 Sobic002G301200--Sobic003G420900 Sobic002G321400 Sobic002G321400 Sobic002G301200--Sobic002G321400 Sobic004G275600 Sobic004G275600 Sobic002G301200--Sobic004G275600 Sobic009G256000 Sobic009G256000 Sobic002G301200--Sobic009G256000 Sobic007G130800 Sobic007G130800 Sobic002G301200--Sobic007G130800 Sobic004G314500 Sobic004G314500 Sobic002G301200--Sobic004G314500 Sobic010G059200 Sobic010G059200 Sobic002G301200--Sobic010G059200 Sobic001G032200 Sobic001G032200 Sobic001G415700--Sobic001G032200 Sobic001G415700--Sobic001G116500 Sobic004G162500 Sobic004G162500 Sobic001G415700--Sobic004G162500 Sobic001G178100 Sobic001G178100 Sobic001G415700--Sobic001G178100 Sobic001G415700--Sobic002G072300 Sobic001G537100 Sobic001G537100 Sobic001G415700--Sobic001G537100 Sobic001G415700--Sobic002G291400 Sobic001G292900 Sobic001G292900 Sobic001G415700--Sobic001G292900 Sobic004G170200 Sobic004G170200 Sobic001G415700--Sobic004G170200 Sobic004G094700 Sobic004G094700 Sobic001G116500--Sobic004G094700 Sobic001G116500--Sobic001G537100 Sobic005G111700 Sobic005G111700 Sobic001G116500--Sobic005G111700 Sobic006G039400 Sobic006G039400 Sobic001G116500--Sobic006G039400 Sobic001G116500--Sobic001G178100 Sobic003G279200 Sobic003G279200 Sobic001G116500--Sobic003G279200 Sobic001G116500--Sobic004G018000 Sobic001G435400 Sobic001G435400 Sobic001G116500--Sobic001G435400 Sobic001G116500--Sobic001G462200 Sobic003G153400 Sobic003G153400 Sobic010G112800--Sobic003G153400 Sobic007G001900 Sobic007G001900 Sobic010G112800--Sobic007G001900 Sobic001G336700 Sobic001G336700 Sobic010G112800--Sobic001G336700 Sobic009G241600 Sobic009G241600 Sobic010G112800--Sobic009G241600 Sobic009G226900 Sobic009G226900 Sobic010G112800--Sobic009G226900 Sobic006G166800 Sobic006G166800 Sobic010G112800--Sobic006G166800 Sobic003G352800 Sobic003G352800 Sobic010G112800--Sobic003G352800 Sobic007G027200 Sobic007G027200 Sobic010G112800--Sobic007G027200 Sobic005G087200 Sobic005G087200 Sobic010G112800--Sobic005G087200 Sobic002G353300 Sobic002G353300 Sobic010G202300--Sobic002G353300 Sobic003G324700 Sobic003G324700 Sobic010G202300--Sobic003G324700 Sobic003G386300 Sobic003G386300 Sobic010G202300--Sobic003G386300 Sobic003G439000 Sobic003G439000 Sobic010G202300--Sobic003G439000 Sobic001G469933 Sobic001G469933 Sobic010G202300--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic010G202300--Sobic001G122400 Sobic001G368500 Sobic001G368500 Sobic010G202300--Sobic001G368500 Sobic004G179200 Sobic004G179200 Sobic010G202300--Sobic004G179200 Sobic001G168800 Sobic001G168800 Sobic010G202300--Sobic001G168800 Sobic002G291400--Sobic006G039400 Sobic008G021200 Sobic008G021200 Sobic002G291400--Sobic008G021200 Sobic008G000400 Sobic008G000400 Sobic002G291400--Sobic008G000400 Sobic005G018800 Sobic005G018800 Sobic002G291400--Sobic005G018800 Sobic001G434200 Sobic001G434200 Sobic002G291400--Sobic001G434200 Sobic006G277000 Sobic006G277000 Sobic002G291400--Sobic006G277000 Sobic002G131500 Sobic002G131500 Sobic002G291400--Sobic002G131500 Sobic005G140500 Sobic005G140500 Sobic002G291400--Sobic005G140500 Sobic008G152000 Sobic008G152000 Sobic002G291400--Sobic008G152000
Octagon: transcription factors


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