Gene annotation
Transcriptome id Sobic.002G148900.2,Sobic.002G148900.1
Synonym Sb02g017290
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5X7J4 , A0A1W0W3Y9
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G17180 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os09g09980.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a046239
Brachypodium KQK05155
Barley HORVU5Hr1G052820.2 , HORVU5Hr1G052820.1
Wheat TraesCS5A02G171900 , TraesCS5B02G169400 , TraesCS5D02G176700
Populus -


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cDNA sequences
Sobic.002G148900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G017000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase APK1B, chloroplast precursor, putative, expressed -
2 Sobic.008G174966 - -
3 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
4 Sobic.007G001900 harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.002G042400 FAD-linked oxidoreductase protein, putative, expressed K00102: LDHD, D-lactate dehydrogenase (cytochrome)
6 Sobic.005G064100 expressed protein -
7 Sobic.002G072300 5-nucleotidase surE, putative, expressed K03787: 5'-nucleotidase
8 Sobic.009G061000 DNA binding protein, putative, expressed -
9 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
10 Sobic.010G112800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
11 Sobic.010G059200 cystathionine gamma-synthase, putative, expressed K01760: cysteine-S-conjugate beta-lyase
12 Sobic.001G154300 DNA binding protein, putative, expressed -
13 Sobic.007G203000 RNA pseudouridine synthase, putative, expressed -
14 Sobic.002G276600 endoglucanase, putative, expressed -
15 Sobic.005G168000 Rf1, mitochondrial precursor, putative, expressed -
16 Sobic.004G030400 expressed protein -
17 Sobic.004G356200 expressed protein -
18 Sobic.002G125800 phosphoglucomutase, putative, expressed -
19 Sobic.001G023500 expressed protein -
20 Sobic.001G143200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane protein 56, putative, expressed -


Gene co-expression network
sample Sobic002G148900 Sobic002G148900 Sobic005G017000 Sobic005G017000 Sobic002G148900--Sobic005G017000 Sobic008G174966 Sobic008G174966 Sobic002G148900--Sobic008G174966 Sobic005G031000 Sobic005G031000 Sobic002G148900--Sobic005G031000 Sobic007G001900 Sobic007G001900 Sobic002G148900--Sobic007G001900 Sobic002G042400 Sobic002G042400 Sobic002G148900--Sobic002G042400 Sobic005G064100 Sobic005G064100 Sobic002G148900--Sobic005G064100 Sobic002G072300 Sobic002G072300 Sobic002G148900--Sobic002G072300 Sobic009G061000 Sobic009G061000 Sobic002G148900--Sobic009G061000 Sobic002G264300 Sobic002G264300 Sobic002G148900--Sobic002G264300 Sobic008G078000 Sobic008G078000 Sobic005G017000--Sobic008G078000 Sobic005G017000--Sobic008G174966 Sobic009G167100 Sobic009G167100 Sobic005G017000--Sobic009G167100 Sobic005G017000--Sobic009G061000 Sobic001G023500 Sobic001G023500 Sobic005G017000--Sobic001G023500 Sobic004G118800 Sobic004G118800 Sobic005G017000--Sobic004G118800 Sobic001G154300 Sobic001G154300 Sobic005G017000--Sobic001G154300 Sobic005G017000--Sobic005G064100 Sobic008G101900 Sobic008G101900 Sobic005G017000--Sobic008G101900 Sobic001G196000 Sobic001G196000 Sobic008G174966--Sobic001G196000 Sobic006G071628 Sobic006G071628 Sobic008G174966--Sobic006G071628 Sobic008G174966--Sobic005G064100 Sobic010G090500 Sobic010G090500 Sobic008G174966--Sobic010G090500 Sobic007G173000 Sobic007G173000 Sobic008G174966--Sobic007G173000 Sobic008G174966--Sobic005G017000 Sobic006G267500 Sobic006G267500 Sobic008G174966--Sobic006G267500 Sobic008G174966--Sobic009G061000 Sobic008G174966--Sobic001G154300 Sobic004G356200 Sobic004G356200 Sobic005G031000--Sobic004G356200 Sobic001G200200 Sobic001G200200 Sobic005G031000--Sobic001G200200 Sobic008G059900 Sobic008G059900 Sobic005G031000--Sobic008G059900 Sobic002G125800 Sobic002G125800 Sobic005G031000--Sobic002G125800 Sobic001G434700 Sobic001G434700 Sobic005G031000--Sobic001G434700 Sobic006G237000 Sobic006G237000 Sobic005G031000--Sobic006G237000 Sobic001G533100 Sobic001G533100 Sobic005G031000--Sobic001G533100 Sobic004G037200 Sobic004G037200 Sobic005G031000--Sobic004G037200 Sobic010G155600 Sobic010G155600 Sobic005G031000--Sobic010G155600 Sobic010G112800 Sobic010G112800 Sobic007G001900--Sobic010G112800 Sobic009G144200 Sobic009G144200 Sobic007G001900--Sobic009G144200 Sobic002G276600 Sobic002G276600 Sobic007G001900--Sobic002G276600 Sobic008G055000 Sobic008G055000 Sobic007G001900--Sobic008G055000 Sobic007G001900--Sobic010G090500 Sobic009G226900 Sobic009G226900 Sobic007G001900--Sobic009G226900 Sobic004G243800 Sobic004G243800 Sobic007G001900--Sobic004G243800 Sobic001G316000 Sobic001G316000 Sobic007G001900--Sobic001G316000 Sobic003G098500 Sobic003G098500 Sobic007G001900--Sobic003G098500 Sobic002G217600 Sobic002G217600 Sobic002G042400--Sobic002G217600 Sobic002G042400--Sobic002G072300 Sobic001G462200 Sobic001G462200 Sobic002G042400--Sobic001G462200 Sobic002G301200 Sobic002G301200 Sobic002G042400--Sobic002G301200 Sobic001G415700 Sobic001G415700 Sobic002G042400--Sobic001G415700 Sobic001G116500 Sobic001G116500 Sobic002G042400--Sobic001G116500 Sobic002G042400--Sobic010G112800 Sobic010G202300 Sobic010G202300 Sobic002G042400--Sobic010G202300 Sobic002G291400 Sobic002G291400 Sobic002G042400--Sobic002G291400 Sobic003G298900 Sobic003G298900 Sobic005G064100--Sobic003G298900 Sobic005G064100--Sobic008G174966 Sobic001G507200 Sobic001G507200 Sobic005G064100--Sobic001G507200 Sobic001G437500 Sobic001G437500 Sobic005G064100--Sobic001G437500 Sobic003G409600 Sobic003G409600 Sobic005G064100--Sobic003G409600 Sobic004G093400 Sobic004G093400 Sobic005G064100--Sobic004G093400 Sobic002G320600 Sobic002G320600 Sobic005G064100--Sobic002G320600 Sobic005G064100--Sobic006G071628 Sobic005G064100--Sobic009G061000 Sobic003G113300 Sobic003G113300 Sobic002G072300--Sobic003G113300 Sobic009G260700 Sobic009G260700 Sobic002G072300--Sobic009G260700 Sobic006G103700 Sobic006G103700 Sobic002G072300--Sobic006G103700 Sobic006G170900 Sobic006G170900 Sobic002G072300--Sobic006G170900 Sobic002G014800 Sobic002G014800 Sobic002G072300--Sobic002G014800 Sobic003G085500 Sobic003G085500 Sobic002G072300--Sobic003G085500 Sobic005G178300 Sobic005G178300 Sobic002G072300--Sobic005G178300 Sobic003G005900 Sobic003G005900 Sobic002G072300--Sobic003G005900 Sobic002G072300--Sobic001G533100 Sobic009G061000--Sobic006G267500 Sobic009G073400 Sobic009G073400 Sobic009G061000--Sobic009G073400 Sobic009G061000--Sobic001G437500 Sobic009G061000--Sobic002G276600 Sobic001G159800 Sobic001G159800 Sobic009G061000--Sobic001G159800 Sobic009G061000--Sobic010G090500 Sobic009G206500 Sobic009G206500 Sobic009G061000--Sobic009G206500 Sobic009G061000--Sobic009G167100 Sobic001G051300 Sobic001G051300 Sobic009G061000--Sobic001G051300 Sobic001G115500 Sobic001G115500 Sobic002G264300--Sobic001G115500 Sobic010G073500 Sobic010G073500 Sobic002G264300--Sobic010G073500 Sobic002G126800 Sobic002G126800 Sobic002G264300--Sobic002G126800 Sobic009G151800 Sobic009G151800 Sobic002G264300--Sobic009G151800 Sobic001G373000 Sobic001G373000 Sobic002G264300--Sobic001G373000 Sobic001G008500 Sobic001G008500 Sobic002G264300--Sobic001G008500 Sobic004G030400 Sobic004G030400 Sobic002G264300--Sobic004G030400 Sobic002G264300--Sobic006G071628 Sobic004G075200 Sobic004G075200 Sobic002G264300--Sobic004G075200
Octagon: transcription factors


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