Gene annotation
Transcriptome id Sobic.006G176500.1
Synonym Sb06g025130
Functional annotation expressed protein
UniProt A0A1B6PMJ1
Pfam PF12552 PF14309
Panther DB PTHR21726 PTHR21726:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45900 : Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
RAP-DB (Rice) LOC_Os04g47180.1 : expressed protein
MaizeGDB (Corn) Zm00025a055154 , Zm00025a010244 , Zm00025a046053
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G176500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G469700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
2 Sobic.007G089500 syntaxin 6, N-terminal domain containing protein, expressed -
3 Sobic.009G093900 rhodanese-like domain containing protein, putative, expressed -
4 Sobic.002G321400 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
5 Sobic.003G125701 - -
6 Sobic.009G168600 low photochemical bleaching 1 protein, putative, expressed -
7 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
8 Sobic.006G084400 OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
9 Sobic.002G393700 expressed protein -
10 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
11 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
12 Sobic.002G042400 FAD-linked oxidoreductase protein, putative, expressed K00102: LDHD, D-lactate dehydrogenase (cytochrome)
13 Sobic.001G116500 phosphoglucomutase, putative, expressed K01835: phosphoglucomutase
14 Sobic.009G155600 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
15 Sobic.006G261700 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
16 Sobic.008G048300 transcription elongation factor protein, putative, expressed -
17 Sobic.009G210200 Acid phosphatase/vanadium-dependent haloperoxidase-related protein(PubMedID : 26465154)@Divergent PAP2 family domain containing protein, expressed -
18 Sobic.008G096800 nnrU, putative, expressed K15744: zeta-carotene isomerase
19 Sobic.008G004300 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
20 Sobic.005G004100 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family


Gene co-expression network
sample Sobic006G176500 Sobic006G176500 Sobic001G469700 Sobic001G469700 Sobic006G176500--Sobic001G469700 Sobic007G089500 Sobic007G089500 Sobic006G176500--Sobic007G089500 Sobic009G093900 Sobic009G093900 Sobic006G176500--Sobic009G093900 Sobic002G321400 Sobic002G321400 Sobic006G176500--Sobic002G321400 Sobic003G125701 Sobic003G125701 Sobic006G176500--Sobic003G125701 Sobic009G168600 Sobic009G168600 Sobic006G176500--Sobic009G168600 Sobic001G462200 Sobic001G462200 Sobic006G176500--Sobic001G462200 Sobic006G084400 Sobic006G084400 Sobic006G176500--Sobic006G084400 Sobic002G393700 Sobic002G393700 Sobic006G176500--Sobic002G393700 Sobic009G190600 Sobic009G190600 Sobic001G469700--Sobic009G190600 Sobic001G469700--Sobic006G176500 Sobic001G469700--Sobic006G084400 Sobic005G038400 Sobic005G038400 Sobic001G469700--Sobic005G038400 Sobic007G079400 Sobic007G079400 Sobic001G469700--Sobic007G079400 Sobic001G469700--Sobic002G393700 Sobic001G173500 Sobic001G173500 Sobic001G469700--Sobic001G173500 Sobic001G469700--Sobic003G125701 Sobic001G222600 Sobic001G222600 Sobic001G469700--Sobic001G222600 Sobic010G188600 Sobic010G188600 Sobic007G089500--Sobic010G188600 Sobic006G261700 Sobic006G261700 Sobic007G089500--Sobic006G261700 Sobic005G073200 Sobic005G073200 Sobic007G089500--Sobic005G073200 Sobic009G063100 Sobic009G063100 Sobic007G089500--Sobic009G063100 Sobic002G148100 Sobic002G148100 Sobic007G089500--Sobic002G148100 Sobic001G514800 Sobic001G514800 Sobic007G089500--Sobic001G514800 Sobic001G085600 Sobic001G085600 Sobic007G089500--Sobic001G085600 Sobic009G210200 Sobic009G210200 Sobic007G089500--Sobic009G210200 Sobic002G218500 Sobic002G218500 Sobic007G089500--Sobic002G218500 Sobic002G431300 Sobic002G431300 Sobic009G093900--Sobic002G431300 Sobic006G055800 Sobic006G055800 Sobic009G093900--Sobic006G055800 Sobic009G093900--Sobic009G168600 Sobic006G186600 Sobic006G186600 Sobic009G093900--Sobic006G186600 Sobic008G089500 Sobic008G089500 Sobic009G093900--Sobic008G089500 Sobic006G128300 Sobic006G128300 Sobic009G093900--Sobic006G128300 Sobic004G144400 Sobic004G144400 Sobic009G093900--Sobic004G144400 Sobic004G016400 Sobic004G016400 Sobic009G093900--Sobic004G016400 Sobic004G336000 Sobic004G336000 Sobic009G093900--Sobic004G336000 Sobic004G060100 Sobic004G060100 Sobic002G321400--Sobic004G060100 Sobic008G021200 Sobic008G021200 Sobic002G321400--Sobic008G021200 Sobic009G256000 Sobic009G256000 Sobic002G321400--Sobic009G256000 Sobic005G018800 Sobic005G018800 Sobic002G321400--Sobic005G018800 Sobic001G435400 Sobic001G435400 Sobic002G321400--Sobic001G435400 Sobic007G161200 Sobic007G161200 Sobic002G321400--Sobic007G161200 Sobic002G301200 Sobic002G301200 Sobic002G321400--Sobic002G301200 Sobic004G283600 Sobic004G283600 Sobic002G321400--Sobic004G283600 Sobic004G094700 Sobic004G094700 Sobic002G321400--Sobic004G094700 Sobic003G125701--Sobic001G173500 Sobic001G033100 Sobic001G033100 Sobic003G125701--Sobic001G033100 Sobic001G292000 Sobic001G292000 Sobic003G125701--Sobic001G292000 Sobic003G125701--Sobic009G210200 Sobic002G279700 Sobic002G279700 Sobic003G125701--Sobic002G279700 Sobic001G496300 Sobic001G496300 Sobic003G125701--Sobic001G496300 Sobic001G357300 Sobic001G357300 Sobic003G125701--Sobic001G357300 Sobic003G125701--Sobic007G079400 Sobic008G015800 Sobic008G015800 Sobic003G125701--Sobic008G015800 Sobic008G096800 Sobic008G096800 Sobic009G168600--Sobic008G096800 Sobic005G133700 Sobic005G133700 Sobic009G168600--Sobic005G133700 Sobic002G406700 Sobic002G406700 Sobic009G168600--Sobic002G406700 Sobic009G148500 Sobic009G148500 Sobic009G168600--Sobic009G148500 Sobic001G083100 Sobic001G083100 Sobic009G168600--Sobic001G083100 Sobic003G372900 Sobic003G372900 Sobic009G168600--Sobic003G372900 Sobic009G168600--Sobic006G055800 Sobic003G151500 Sobic003G151500 Sobic009G168600--Sobic003G151500 Sobic004G238200 Sobic004G238200 Sobic009G168600--Sobic004G238200 Sobic001G486700 Sobic001G486700 Sobic001G462200--Sobic001G486700 Sobic003G378400 Sobic003G378400 Sobic001G462200--Sobic003G378400 Sobic009G124000 Sobic009G124000 Sobic001G462200--Sobic009G124000 Sobic004G018000 Sobic004G018000 Sobic001G462200--Sobic004G018000 Sobic001G462200--Sobic004G016400 Sobic007G208300 Sobic007G208300 Sobic001G462200--Sobic007G208300 Sobic001G116500 Sobic001G116500 Sobic001G462200--Sobic001G116500 Sobic003G193700 Sobic003G193700 Sobic001G462200--Sobic003G193700 Sobic008G004300 Sobic008G004300 Sobic001G462200--Sobic008G004300 Sobic002G225400 Sobic002G225400 Sobic006G084400--Sobic002G225400 Sobic001G500100 Sobic001G500100 Sobic006G084400--Sobic001G500100 Sobic006G084400--Sobic001G033100 Sobic006G084400--Sobic001G222600 Sobic009G185201 Sobic009G185201 Sobic006G084400--Sobic009G185201 Sobic007G108800 Sobic007G108800 Sobic006G084400--Sobic007G108800 Sobic006G084400--Sobic009G210200 Sobic006G084400--Sobic005G038400 Sobic003G375700 Sobic003G375700 Sobic006G084400--Sobic003G375700 Sobic002G170200 Sobic002G170200 Sobic002G393700--Sobic002G170200 Sobic002G393700--Sobic001G435400 Sobic002G393700--Sobic006G261700 Sobic002G393700--Sobic007G079400 Sobic006G127600 Sobic006G127600 Sobic002G393700--Sobic006G127600 Sobic003G176000 Sobic003G176000 Sobic002G393700--Sobic003G176000 Sobic001G009600 Sobic001G009600 Sobic002G393700--Sobic001G009600 Sobic002G393700--Sobic004G018000 Sobic001G412100 Sobic001G412100 Sobic002G393700--Sobic001G412100
Octagon: transcription factors


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