Gene annotation
| Transcriptome id | Sobic.002G074400.1 |
|---|---|
| Synonym | FQR1, Sb02g006210 |
| Functional annotation | NADPH-dependent FMN reductase domain containing protein, expressed |
| UniProt | A0A1B6Q9S9 |
| Pfam | PF03358 |
| Panther DB | PTHR30546 PTHR30546:SF4 |
| NCBI CDD | KOG3135; 1,4-benzoquinone reductase-like |
| KEGG Orthology | K03809; NAD(P)H dehydrogenase (quinone) |
| Gene Ontology | GO:0016491; oxidoreductase activity |
Orthologs (automatic annotation)
| TAIR | AT5G54500 : flavodoxin-like quinone reductase 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os05g42190.1 : NADPH-dependent FMN reductase domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a013416 , Zm00025a042932 , Zm00025a037891 |
| Brachypodium | KQK21217 |
| Barley | HORVU1Hr1G066240.2 , HORVU2Hr1G021810.1 , HORVU1Hr1G066240.1 , HORVU4Hr1G059170.1 , HORVU1Hr1G066240.3 , HORVU4Hr1G059170.3 , HORVU1Hr1G066240.4 , HORVU4Hr1G059170.2 |
| Wheat | TraesCS2B02G146000 , TraesCS4A02G098900 , TraesCS1B02G332700 , TraesCS2A02G259000 , TraesCS2D02G126900 , TraesCS2A02G259200 , TraesCS4D02G206300 , TraesCS4B02G205400 , TraesCS2A02G124200 , TraesCS1D02G320300 , TraesCS2D02G127000 , TraesCS2A02G124100 , TraesCS7A02G425200 , TraesCS2D02G264500 , TraesCS7D02G416600 , TraesCS1A02G320500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G015000 | cytochrome P450, putative, expressed | - |
| 2 | Sobic.001G416800 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11251: histone H2A |
| 3 | Sobic.002G041533 | - | - |
| 4 | Sobic.002G403400 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 5 | Sobic.002G059200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11251: histone H2A |
| 6 | Sobic.003G127600 | ubiquitin-conjugating enzyme, putative, expressed | K06688: UBE2C, ubiquitin-conjugating enzyme E2 C |
| 7 | Sobic.002G056300 | AT hook-containing DNA-binding protein, putative, expressed | K11275: histone H1/5 |
| 8 | Sobic.008G088860 | - | - |
| 9 | Sobic.008G061000 | expressed protein | - |
| 10 | Sobic.003G350100 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 11 | Sobic.004G329100 | gibberellin 2-beta-dioxygenase 7, putative, expressed | - |
| 12 | Sobic.002G387400 | calmodulin-binding protein, putative, expressed | - |
| 13 | Sobic.001G416900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11251: histone H2A |
| 14 | Sobic.002G209300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 15 | Sobic.003G295200 | serine/threonine protein kinase, putative, expressed | - |
| 16 | Sobic.004G265400 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 17 | Sobic.005G102100 | chalcone synthase, putative, expressed | - |
| 18 | Sobic.003G067300 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 19 | Sobic.001G541900 | "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 20 | Sobic.009G152901 | - | - |
Gene co-expression network
Octagon: transcription factors
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