Gene annotation
Transcriptome id Sobic.002G097400.1
Synonym Sb02g008040
Functional annotation expressed protein
UniProt C5X2S1
Pfam PF08224
Panther DB PTHR33377 PTHR33377:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02970.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G024300 expressed protein -
2 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
3 Sobic.001G460600 RING zinc finger protein-like, putative, expressed -
4 Sobic.007G216100 expressed protein -
5 Sobic.007G199200 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
6 Sobic.001G524500 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
7 Sobic.009G259700 expressed protein -
8 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
9 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -
10 Sobic.010G229400 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
11 Sobic.003G370900 expressed protein -
12 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
13 Sobic.002G247500 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
14 Sobic.004G183400 expressed protein -
15 Sobic.001G473300 stage II sporulation protein E, putative, expressed -
16 Sobic.010G000900 spotted leaf 11, putative, expressed -
17 Sobic.004G183501 - -
18 Sobic.004G119200 splicing factor 3B subunit 5, putative, expressed K12832: SF3B5, splicing factor 3B subunit 5
19 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
20 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4


Gene co-expression network
sample Sobic002G097400 Sobic002G097400 Sobic010G024300 Sobic010G024300 Sobic002G097400--Sobic010G024300 Sobic001G073000 Sobic001G073000 Sobic002G097400--Sobic001G073000 Sobic001G460600 Sobic001G460600 Sobic002G097400--Sobic001G460600 Sobic007G216100 Sobic007G216100 Sobic002G097400--Sobic007G216100 Sobic007G199200 Sobic007G199200 Sobic002G097400--Sobic007G199200 Sobic001G524500 Sobic001G524500 Sobic002G097400--Sobic001G524500 Sobic009G259700 Sobic009G259700 Sobic002G097400--Sobic009G259700 Sobic010G027600 Sobic010G027600 Sobic002G097400--Sobic010G027600 Sobic009G217100 Sobic009G217100 Sobic002G097400--Sobic009G217100 Sobic010G024300--Sobic007G199200 Sobic009G048800 Sobic009G048800 Sobic010G024300--Sobic009G048800 Sobic001G000501 Sobic001G000501 Sobic010G024300--Sobic001G000501 Sobic010G024300--Sobic002G097400 Sobic001G000700 Sobic001G000700 Sobic010G024300--Sobic001G000700 Sobic003G291200 Sobic003G291200 Sobic010G024300--Sobic003G291200 Sobic008G088833 Sobic008G088833 Sobic010G024300--Sobic008G088833 Sobic008G084300 Sobic008G084300 Sobic010G024300--Sobic008G084300 Sobic007G163901 Sobic007G163901 Sobic010G024300--Sobic007G163901 Sobic009G228800 Sobic009G228800 Sobic001G073000--Sobic009G228800 Sobic010G083700 Sobic010G083700 Sobic001G073000--Sobic010G083700 Sobic001G007200 Sobic001G007200 Sobic001G073000--Sobic001G007200 Sobic001G415500 Sobic001G415500 Sobic001G073000--Sobic001G415500 Sobic007G186300 Sobic007G186300 Sobic001G073000--Sobic007G186300 Sobic001G054200 Sobic001G054200 Sobic001G073000--Sobic001G054200 Sobic009G246950 Sobic009G246950 Sobic001G073000--Sobic009G246950 Sobic010G253800 Sobic010G253800 Sobic001G073000--Sobic010G253800 Sobic003G248600 Sobic003G248600 Sobic001G073000--Sobic003G248600 Sobic009G225000 Sobic009G225000 Sobic001G460600--Sobic009G225000 Sobic001G106700 Sobic001G106700 Sobic001G460600--Sobic001G106700 Sobic009G135600 Sobic009G135600 Sobic001G460600--Sobic009G135600 Sobic003G370900 Sobic003G370900 Sobic001G460600--Sobic003G370900 Sobic010G000900 Sobic010G000900 Sobic001G460600--Sobic010G000900 Sobic003G117900 Sobic003G117900 Sobic001G460600--Sobic003G117900 Sobic001G461900 Sobic001G461900 Sobic001G460600--Sobic001G461900 Sobic004G289800 Sobic004G289800 Sobic001G460600--Sobic004G289800 Sobic003G323600 Sobic003G323600 Sobic001G460600--Sobic003G323600 Sobic007G216100--Sobic010G000900 Sobic002G247500 Sobic002G247500 Sobic007G216100--Sobic002G247500 Sobic007G216100--Sobic003G117900 Sobic003G295900 Sobic003G295900 Sobic007G216100--Sobic003G295900 Sobic007G216100--Sobic001G106700 Sobic004G167400 Sobic004G167400 Sobic007G216100--Sobic004G167400 Sobic001G388200 Sobic001G388200 Sobic007G216100--Sobic001G388200 Sobic002G375300 Sobic002G375300 Sobic007G216100--Sobic002G375300 Sobic007G216100--Sobic003G370900 Sobic007G199200--Sobic009G048800 Sobic007G199200--Sobic010G024300 Sobic005G210850 Sobic005G210850 Sobic007G199200--Sobic005G210850 Sobic004G023300 Sobic004G023300 Sobic007G199200--Sobic004G023300 Sobic007G199200--Sobic002G097400 Sobic007G199200--Sobic001G000501 Sobic005G082600 Sobic005G082600 Sobic007G199200--Sobic005G082600 Sobic007G199200--Sobic008G088833 Sobic007G199200--Sobic008G084300 Sobic005G176000 Sobic005G176000 Sobic001G524500--Sobic005G176000 Sobic004G103600 Sobic004G103600 Sobic001G524500--Sobic004G103600 Sobic001G524500--Sobic009G228800 Sobic006G148200 Sobic006G148200 Sobic001G524500--Sobic006G148200 Sobic001G524500--Sobic003G248600 Sobic002G113800 Sobic002G113800 Sobic001G524500--Sobic002G113800 Sobic004G072800 Sobic004G072800 Sobic001G524500--Sobic004G072800 Sobic005G086500 Sobic005G086500 Sobic001G524500--Sobic005G086500 Sobic001G512300 Sobic001G512300 Sobic001G524500--Sobic001G512300 Sobic001G253600 Sobic001G253600 Sobic009G259700--Sobic001G253600 Sobic010G062000 Sobic010G062000 Sobic009G259700--Sobic010G062000 Sobic009G259700--Sobic001G073000 Sobic002G291300 Sobic002G291300 Sobic009G259700--Sobic002G291300 Sobic004G203100 Sobic004G203100 Sobic009G259700--Sobic004G203100 Sobic002G180600 Sobic002G180600 Sobic009G259700--Sobic002G180600 Sobic009G259700--Sobic001G524500 Sobic003G228000 Sobic003G228000 Sobic009G259700--Sobic003G228000 Sobic009G259700--Sobic010G253800 Sobic010G018700 Sobic010G018700 Sobic010G027600--Sobic010G018700 Sobic004G066200 Sobic004G066200 Sobic010G027600--Sobic004G066200 Sobic009G222500 Sobic009G222500 Sobic010G027600--Sobic009G222500 Sobic002G352600 Sobic002G352600 Sobic010G027600--Sobic002G352600 Sobic009G179700 Sobic009G179700 Sobic010G027600--Sobic009G179700 Sobic002G110700 Sobic002G110700 Sobic010G027600--Sobic002G110700 Sobic002G192200 Sobic002G192200 Sobic010G027600--Sobic002G192200 Sobic009G228700 Sobic009G228700 Sobic010G027600--Sobic009G228700 Sobic006G049700 Sobic006G049700 Sobic010G027600--Sobic006G049700 Sobic009G259400 Sobic009G259400 Sobic009G217100--Sobic009G259400 Sobic009G217100--Sobic010G000900 Sobic007G007000 Sobic007G007000 Sobic009G217100--Sobic007G007000 Sobic009G217100--Sobic002G352600 Sobic002G226900 Sobic002G226900 Sobic009G217100--Sobic002G226900 Sobic004G006200 Sobic004G006200 Sobic009G217100--Sobic004G006200 Sobic004G348300 Sobic004G348300 Sobic009G217100--Sobic004G348300 Sobic001G137100 Sobic001G137100 Sobic009G217100--Sobic001G137100 Sobic010G251000 Sobic010G251000 Sobic009G217100--Sobic010G251000
Octagon: transcription factors


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