Gene annotation
Transcriptome id Sobic.009G259700.1
Synonym Sb09g030890
Functional annotation expressed protein
UniProt C5YX34
Pfam -
Panther DB PTHR33828 PTHR33828:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11600 : -
RAP-DB (Rice) LOC_Os05g51754.1 : expressed protein
MaizeGDB (Corn) Zm00025a036826
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G259700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G253600 expressed protein -
2 Sobic.010G062000 expressed protein -
3 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
4 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
5 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
6 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
7 Sobic.001G524500 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
8 Sobic.003G228000 cytochrome P450 72A1, putative, expressed -
9 Sobic.010G253800 expressed protein -
10 Sobic.006G016200 expressed protein -
11 Sobic.002G282400 expressed protein -
12 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
13 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
14 Sobic.003G295400 MAC/Perforin domain containing protein, putative, expressed -
15 Sobic.004G006300 translationally-controlled tumor protein, putative, expressed -
16 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
17 Sobic.002G258100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.007G036700 amine oxidase, putative, expressed K11450: KDM1A, AOF2, [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
19 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
20 Sobic.001G349500 ADP-ribosylation factor, putative, expressed K07952: ADP-ribosylation factor related protein 1


Gene co-expression network
sample Sobic009G259700 Sobic009G259700 Sobic001G253600 Sobic001G253600 Sobic009G259700--Sobic001G253600 Sobic010G062000 Sobic010G062000 Sobic009G259700--Sobic010G062000 Sobic001G073000 Sobic001G073000 Sobic009G259700--Sobic001G073000 Sobic002G291300 Sobic002G291300 Sobic009G259700--Sobic002G291300 Sobic004G203100 Sobic004G203100 Sobic009G259700--Sobic004G203100 Sobic002G180600 Sobic002G180600 Sobic009G259700--Sobic002G180600 Sobic001G524500 Sobic001G524500 Sobic009G259700--Sobic001G524500 Sobic003G228000 Sobic003G228000 Sobic009G259700--Sobic003G228000 Sobic010G253800 Sobic010G253800 Sobic009G259700--Sobic010G253800 Sobic010G228600 Sobic010G228600 Sobic001G253600--Sobic010G228600 Sobic010G144400 Sobic010G144400 Sobic001G253600--Sobic010G144400 Sobic001G056700 Sobic001G056700 Sobic001G253600--Sobic001G056700 Sobic002G258100 Sobic002G258100 Sobic001G253600--Sobic002G258100 Sobic001G471900 Sobic001G471900 Sobic001G253600--Sobic001G471900 Sobic001G149700 Sobic001G149700 Sobic001G253600--Sobic001G149700 Sobic008G106800 Sobic008G106800 Sobic001G253600--Sobic008G106800 Sobic007G126200 Sobic007G126200 Sobic001G253600--Sobic007G126200 Sobic003G116700 Sobic003G116700 Sobic001G253600--Sobic003G116700 Sobic004G072800 Sobic004G072800 Sobic010G062000--Sobic004G072800 Sobic002G309400 Sobic002G309400 Sobic010G062000--Sobic002G309400 Sobic009G068800 Sobic009G068800 Sobic010G062000--Sobic009G068800 Sobic001G089500 Sobic001G089500 Sobic010G062000--Sobic001G089500 Sobic010G238700 Sobic010G238700 Sobic010G062000--Sobic010G238700 Sobic001G529000 Sobic001G529000 Sobic010G062000--Sobic001G529000 Sobic003G007500 Sobic003G007500 Sobic010G062000--Sobic003G007500 Sobic007G118000 Sobic007G118000 Sobic010G062000--Sobic007G118000 Sobic002G202300 Sobic002G202300 Sobic010G062000--Sobic002G202300 Sobic009G228800 Sobic009G228800 Sobic001G073000--Sobic009G228800 Sobic010G083700 Sobic010G083700 Sobic001G073000--Sobic010G083700 Sobic001G007200 Sobic001G007200 Sobic001G073000--Sobic001G007200 Sobic001G415500 Sobic001G415500 Sobic001G073000--Sobic001G415500 Sobic007G186300 Sobic007G186300 Sobic001G073000--Sobic007G186300 Sobic001G054200 Sobic001G054200 Sobic001G073000--Sobic001G054200 Sobic009G246950 Sobic009G246950 Sobic001G073000--Sobic009G246950 Sobic001G073000--Sobic010G253800 Sobic003G248600 Sobic003G248600 Sobic001G073000--Sobic003G248600 Sobic001G371300 Sobic001G371300 Sobic002G291300--Sobic001G371300 Sobic002G291300--Sobic001G056700 Sobic003G273100 Sobic003G273100 Sobic002G291300--Sobic003G273100 Sobic001G427800 Sobic001G427800 Sobic002G291300--Sobic001G427800 Sobic001G230700 Sobic001G230700 Sobic002G291300--Sobic001G230700 Sobic002G291300--Sobic001G471900 Sobic007G126100 Sobic007G126100 Sobic002G291300--Sobic007G126100 Sobic001G478300 Sobic001G478300 Sobic002G291300--Sobic001G478300 Sobic004G164500 Sobic004G164500 Sobic002G291300--Sobic004G164500 Sobic010G168600 Sobic010G168600 Sobic004G203100--Sobic010G168600 Sobic004G203100--Sobic003G007500 Sobic002G352700 Sobic002G352700 Sobic004G203100--Sobic002G352700 Sobic004G203100--Sobic001G478300 Sobic008G180900 Sobic008G180900 Sobic004G203100--Sobic008G180900 Sobic004G203100--Sobic010G238700 Sobic009G054700 Sobic009G054700 Sobic004G203100--Sobic009G054700 Sobic004G203100--Sobic010G083700 Sobic010G058900 Sobic010G058900 Sobic004G203100--Sobic010G058900 Sobic002G264400 Sobic002G264400 Sobic002G180600--Sobic002G264400 Sobic006G264300 Sobic006G264300 Sobic002G180600--Sobic006G264300 Sobic002G282400 Sobic002G282400 Sobic002G180600--Sobic002G282400 Sobic002G180600--Sobic010G253800 Sobic006G141500 Sobic006G141500 Sobic002G180600--Sobic006G141500 Sobic002G249000 Sobic002G249000 Sobic002G180600--Sobic002G249000 Sobic003G333400 Sobic003G333400 Sobic002G180600--Sobic003G333400 Sobic001G329100 Sobic001G329100 Sobic002G180600--Sobic001G329100 Sobic010G071900 Sobic010G071900 Sobic002G180600--Sobic010G071900 Sobic005G176000 Sobic005G176000 Sobic001G524500--Sobic005G176000 Sobic004G103600 Sobic004G103600 Sobic001G524500--Sobic004G103600 Sobic001G524500--Sobic009G228800 Sobic006G148200 Sobic006G148200 Sobic001G524500--Sobic006G148200 Sobic001G524500--Sobic003G248600 Sobic002G113800 Sobic002G113800 Sobic001G524500--Sobic002G113800 Sobic001G524500--Sobic004G072800 Sobic005G086500 Sobic005G086500 Sobic001G524500--Sobic005G086500 Sobic001G512300 Sobic001G512300 Sobic001G524500--Sobic001G512300 Sobic003G228000--Sobic010G071900 Sobic005G195100 Sobic005G195100 Sobic003G228000--Sobic005G195100 Sobic010G243200 Sobic010G243200 Sobic003G228000--Sobic010G243200 Sobic010G185500 Sobic010G185500 Sobic003G228000--Sobic010G185500 Sobic003G228000--Sobic002G180600 Sobic010G121300 Sobic010G121300 Sobic003G228000--Sobic010G121300 Sobic003G228000--Sobic010G253800 Sobic003G228000--Sobic002G282400 Sobic001G319500 Sobic001G319500 Sobic003G228000--Sobic001G319500 Sobic009G146100 Sobic009G146100 Sobic010G253800--Sobic009G146100 Sobic004G293700 Sobic004G293700 Sobic010G253800--Sobic004G293700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic010G253800--Sobic002G352700 Sobic010G253800--Sobic001G007200 Sobic006G263900 Sobic006G263900 Sobic010G253800--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic010G253800--Sobic009G171700 Sobic010G253800--Sobic001G054200
Octagon: transcription factors


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