Gene annotation
Transcriptome id Sobic.010G062000.1,Sobic.010G062000.3,Sobic.010G062000.2
Synonym Sb10g005370
Functional annotation expressed protein
UniProt A0A194YHN0 , A0A194YHL7 , A0A194YHL1
Pfam -
Panther DB PTHR35161 PTHR35161:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g04570.1 : expressed protein
MaizeGDB (Corn) Zm00025a041104 , Zm00025a049810 , Zm00025a022406
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G072800 expressed protein -
2 Sobic.002G309400 -(PubMedID : 26976818)@NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed K00028: malate dehydrogenase (decarboxylating)
3 Sobic.009G068800 expressed protein -
4 Sobic.001G089500 RNA recognition motif containing protein, putative, expressed -
5 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
6 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
7 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
8 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
9 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
10 Sobic.009G259700 expressed protein -
11 Sobic.004G222600 expressed protein -
12 Sobic.007G045600 MSP domain containing protein, expressed -
13 Sobic.006G220700 signal recognition particle 14 kDa protein, putative, expressed K03104: signal recognition particle subunit SRP14
14 Sobic.002G296300 expressed protein -
15 Sobic.001G048700 TBC domain containing protein, expressed -
16 Sobic.006G141500 expressed protein -
17 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
18 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
19 Sobic.008G073300 clathrin adaptor complex small chain domain containing protein, expressed K11827: AP-2 complex subunit sigma-1
20 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3


Gene co-expression network
sample Sobic010G062000 Sobic010G062000 Sobic004G072800 Sobic004G072800 Sobic010G062000--Sobic004G072800 Sobic002G309400 Sobic002G309400 Sobic010G062000--Sobic002G309400 Sobic009G068800 Sobic009G068800 Sobic010G062000--Sobic009G068800 Sobic001G089500 Sobic001G089500 Sobic010G062000--Sobic001G089500 Sobic010G238700 Sobic010G238700 Sobic010G062000--Sobic010G238700 Sobic001G529000 Sobic001G529000 Sobic010G062000--Sobic001G529000 Sobic003G007500 Sobic003G007500 Sobic010G062000--Sobic003G007500 Sobic007G118000 Sobic007G118000 Sobic010G062000--Sobic007G118000 Sobic002G202300 Sobic002G202300 Sobic010G062000--Sobic002G202300 Sobic001G067900 Sobic001G067900 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic002G281300 Sobic002G281300 Sobic004G072800--Sobic002G281300 Sobic001G429400 Sobic001G429400 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic002G309400--Sobic001G529000 Sobic001G331900 Sobic001G331900 Sobic002G309400--Sobic001G331900 Sobic005G092800 Sobic005G092800 Sobic002G309400--Sobic005G092800 Sobic008G130400 Sobic008G130400 Sobic002G309400--Sobic008G130400 Sobic003G124800 Sobic003G124800 Sobic002G309400--Sobic003G124800 Sobic006G150600 Sobic006G150600 Sobic002G309400--Sobic006G150600 Sobic003G362400 Sobic003G362400 Sobic002G309400--Sobic003G362400 Sobic007G115100 Sobic007G115100 Sobic002G309400--Sobic007G115100 Sobic004G107600 Sobic004G107600 Sobic002G309400--Sobic004G107600 Sobic010G039800 Sobic010G039800 Sobic009G068800--Sobic010G039800 Sobic008G132700 Sobic008G132700 Sobic009G068800--Sobic008G132700 Sobic009G068800--Sobic001G529000 Sobic010G153100 Sobic010G153100 Sobic009G068800--Sobic010G153100 Sobic006G220700 Sobic006G220700 Sobic009G068800--Sobic006G220700 Sobic002G263800 Sobic002G263800 Sobic009G068800--Sobic002G263800 Sobic006G141500 Sobic006G141500 Sobic009G068800--Sobic006G141500 Sobic009G016201 Sobic009G016201 Sobic009G068800--Sobic009G016201 Sobic002G218000 Sobic002G218000 Sobic009G068800--Sobic002G218000 Sobic007G045600 Sobic007G045600 Sobic001G089500--Sobic007G045600 Sobic008G073300 Sobic008G073300 Sobic001G089500--Sobic008G073300 Sobic001G089500--Sobic002G202300 Sobic001G089500--Sobic007G115100 Sobic001G224400 Sobic001G224400 Sobic001G089500--Sobic001G224400 Sobic001G089500--Sobic010G153100 Sobic003G155400 Sobic003G155400 Sobic001G089500--Sobic003G155400 Sobic004G196300 Sobic004G196300 Sobic001G089500--Sobic004G196300 Sobic002G296300 Sobic002G296300 Sobic001G089500--Sobic002G296300 Sobic006G222400 Sobic006G222400 Sobic010G238700--Sobic006G222400 Sobic010G238700--Sobic001G529000 Sobic009G036900 Sobic009G036900 Sobic010G238700--Sobic009G036900 Sobic001G126200 Sobic001G126200 Sobic010G238700--Sobic001G126200 Sobic003G382900 Sobic003G382900 Sobic010G238700--Sobic003G382900 Sobic004G203100 Sobic004G203100 Sobic010G238700--Sobic004G203100 Sobic010G238700--Sobic003G007500 Sobic008G132800 Sobic008G132800 Sobic010G238700--Sobic008G132800 Sobic001G010700 Sobic001G010700 Sobic010G238700--Sobic001G010700 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic001G529000--Sobic003G124800 Sobic001G529000--Sobic001G331900 Sobic005G157200 Sobic005G157200 Sobic001G529000--Sobic005G157200 Sobic007G163700 Sobic007G163700 Sobic001G529000--Sobic007G163700 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic004G300900 Sobic004G300900 Sobic001G529000--Sobic004G300900 Sobic007G186300 Sobic007G186300 Sobic003G007500--Sobic007G186300 Sobic010G083700 Sobic010G083700 Sobic003G007500--Sobic010G083700 Sobic010G168600 Sobic010G168600 Sobic003G007500--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic003G007500--Sobic004G072800 Sobic004G104900 Sobic004G104900 Sobic003G007500--Sobic004G104900 Sobic003G007500--Sobic002G281300 Sobic007G118000--Sobic007G045600 Sobic001G033500 Sobic001G033500 Sobic007G118000--Sobic001G033500 Sobic001G402300 Sobic001G402300 Sobic007G118000--Sobic001G402300 Sobic003G374000 Sobic003G374000 Sobic007G118000--Sobic003G374000 Sobic007G118000--Sobic004G072800 Sobic007G118000--Sobic002G281300 Sobic007G118000--Sobic001G067900 Sobic004G141700 Sobic004G141700 Sobic007G118000--Sobic004G141700 Sobic001G323300 Sobic001G323300 Sobic007G118000--Sobic001G323300 Sobic003G253000 Sobic003G253000 Sobic002G202300--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic002G202300--Sobic003G220600 Sobic002G202300--Sobic006G141500 Sobic006G264300 Sobic006G264300 Sobic002G202300--Sobic006G264300 Sobic002G046100 Sobic002G046100 Sobic002G202300--Sobic002G046100 Sobic003G115800 Sobic003G115800 Sobic002G202300--Sobic003G115800 Sobic010G204300 Sobic010G204300 Sobic002G202300--Sobic010G204300 Sobic006G062800 Sobic006G062800 Sobic002G202300--Sobic006G062800 Sobic006G182100 Sobic006G182100 Sobic002G202300--Sobic006G182100
Octagon: transcription factors


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