Gene annotation
Transcriptome id Sobic.010G024300.1,Sobic.010G024300.2
Synonym Sb10g002280
Functional annotation expressed protein
UniProt C5Z3D7 , C5Z3E3
Pfam PF12274
Panther DB PTHR33326 PTHR33326:SF4 PTHR33326:SF4 PTHR33326
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g04470.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G199200 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
2 Sobic.009G048800 - -
3 Sobic.001G000501 - -
4 Sobic.002G097400 expressed protein -
5 Sobic.001G000700 glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
6 Sobic.003G291200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
7 Sobic.008G088833 - -
8 Sobic.008G084300 - -
9 Sobic.007G163901 - -
10 Sobic.008G101200 powdery mildew resistance protein PM3b, putative, expressed -
11 Sobic.005G089400 - -
12 Sobic.004G167400 expressed protein -
13 Sobic.001G496100 - -
14 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
15 Sobic.003G265100 lipid phosphatase protein, putative, expressed -
16 Sobic.003G257000 THAP domain-containing protein 4, putative, expressed -
17 Sobic.006G215700 OsFBX172 - F-box domain containing protein, expressed -
18 Sobic.005G082600 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
19 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
20 Sobic.007G216100 expressed protein -


Gene co-expression network
sample Sobic010G024300 Sobic010G024300 Sobic007G199200 Sobic007G199200 Sobic010G024300--Sobic007G199200 Sobic009G048800 Sobic009G048800 Sobic010G024300--Sobic009G048800 Sobic001G000501 Sobic001G000501 Sobic010G024300--Sobic001G000501 Sobic002G097400 Sobic002G097400 Sobic010G024300--Sobic002G097400 Sobic001G000700 Sobic001G000700 Sobic010G024300--Sobic001G000700 Sobic003G291200 Sobic003G291200 Sobic010G024300--Sobic003G291200 Sobic008G088833 Sobic008G088833 Sobic010G024300--Sobic008G088833 Sobic008G084300 Sobic008G084300 Sobic010G024300--Sobic008G084300 Sobic007G163901 Sobic007G163901 Sobic010G024300--Sobic007G163901 Sobic007G199200--Sobic009G048800 Sobic007G199200--Sobic010G024300 Sobic005G210850 Sobic005G210850 Sobic007G199200--Sobic005G210850 Sobic004G023300 Sobic004G023300 Sobic007G199200--Sobic004G023300 Sobic007G199200--Sobic002G097400 Sobic007G199200--Sobic001G000501 Sobic005G082600 Sobic005G082600 Sobic007G199200--Sobic005G082600 Sobic007G199200--Sobic008G088833 Sobic007G199200--Sobic008G084300 Sobic009G048800--Sobic007G199200 Sobic009G048800--Sobic010G024300 Sobic009G048800--Sobic001G000501 Sobic009G007200 Sobic009G007200 Sobic009G048800--Sobic009G007200 Sobic006G036700 Sobic006G036700 Sobic009G048800--Sobic006G036700 Sobic009G048800--Sobic005G210850 Sobic010G060800 Sobic010G060800 Sobic009G048800--Sobic010G060800 Sobic007G095300 Sobic007G095300 Sobic009G048800--Sobic007G095300 Sobic005G221900 Sobic005G221900 Sobic009G048800--Sobic005G221900 Sobic001G459600 Sobic001G459600 Sobic001G000501--Sobic001G459600 Sobic001G000501--Sobic001G000700 Sobic005G089400 Sobic005G089400 Sobic001G000501--Sobic005G089400 Sobic007G010700 Sobic007G010700 Sobic001G000501--Sobic007G010700 Sobic001G000501--Sobic008G084300 Sobic005G149700 Sobic005G149700 Sobic001G000501--Sobic005G149700 Sobic004G034600 Sobic004G034600 Sobic001G000501--Sobic004G034600 Sobic005G053200 Sobic005G053200 Sobic001G000501--Sobic005G053200 Sobic004G253700 Sobic004G253700 Sobic001G000501--Sobic004G253700 Sobic002G097400--Sobic010G024300 Sobic001G073000 Sobic001G073000 Sobic002G097400--Sobic001G073000 Sobic001G460600 Sobic001G460600 Sobic002G097400--Sobic001G460600 Sobic007G216100 Sobic007G216100 Sobic002G097400--Sobic007G216100 Sobic002G097400--Sobic007G199200 Sobic001G524500 Sobic001G524500 Sobic002G097400--Sobic001G524500 Sobic009G259700 Sobic009G259700 Sobic002G097400--Sobic009G259700 Sobic010G027600 Sobic010G027600 Sobic002G097400--Sobic010G027600 Sobic009G217100 Sobic009G217100 Sobic002G097400--Sobic009G217100 Sobic001G000700--Sobic001G000501 Sobic001G000700--Sobic001G459600 Sobic001G496100 Sobic001G496100 Sobic001G000700--Sobic001G496100 Sobic001G000700--Sobic005G089400 Sobic001G517800 Sobic001G517800 Sobic001G000700--Sobic001G517800 Sobic001G000700--Sobic003G291200 Sobic001G233300 Sobic001G233300 Sobic001G000700--Sobic001G233300 Sobic001G000700--Sobic005G149700 Sobic001G000700--Sobic004G034600 Sobic004G225200 Sobic004G225200 Sobic003G291200--Sobic004G225200 Sobic003G291200--Sobic001G000700 Sobic004G261900 Sobic004G261900 Sobic003G291200--Sobic004G261900 Sobic003G291200--Sobic004G034600 Sobic003G291200--Sobic001G459600 Sobic004G225100 Sobic004G225100 Sobic003G291200--Sobic004G225100 Sobic001G334600 Sobic001G334600 Sobic003G291200--Sobic001G334600 Sobic003G291200--Sobic001G496100 Sobic002G113100 Sobic002G113100 Sobic003G291200--Sobic002G113100 Sobic008G088833--Sobic008G084300 Sobic009G248801 Sobic009G248801 Sobic008G088833--Sobic009G248801 Sobic008G101200 Sobic008G101200 Sobic008G088833--Sobic008G101200 Sobic001G000300 Sobic001G000300 Sobic008G088833--Sobic001G000300 Sobic008G088833--Sobic001G000501 Sobic008G101100 Sobic008G101100 Sobic008G088833--Sobic008G101100 Sobic008G088833--Sobic001G459600 Sobic008G122100 Sobic008G122100 Sobic008G088833--Sobic008G122100 Sobic008G166550 Sobic008G166550 Sobic008G088833--Sobic008G166550 Sobic008G084300--Sobic008G088833 Sobic008G084300--Sobic001G459600 Sobic008G084300--Sobic008G166550 Sobic008G084300--Sobic001G000501 Sobic008G084300--Sobic008G101100 Sobic002G244200 Sobic002G244200 Sobic008G084300--Sobic002G244200 Sobic005G095000 Sobic005G095000 Sobic008G084300--Sobic005G095000 Sobic008G084300--Sobic009G248801 Sobic003G416000 Sobic003G416000 Sobic008G084300--Sobic003G416000 Sobic002G084600 Sobic002G084600 Sobic007G163901--Sobic002G084600 Sobic003G111200 Sobic003G111200 Sobic007G163901--Sobic003G111200 Sobic006G226400 Sobic006G226400 Sobic007G163901--Sobic006G226400 Sobic003G061400 Sobic003G061400 Sobic007G163901--Sobic003G061400 Sobic010G135900 Sobic010G135900 Sobic007G163901--Sobic010G135900 Sobic005G169400 Sobic005G169400 Sobic007G163901--Sobic005G169400 Sobic009G114000 Sobic009G114000 Sobic007G163901--Sobic009G114000 Sobic002G190500 Sobic002G190500 Sobic007G163901--Sobic002G190500 Sobic004G320600 Sobic004G320600 Sobic007G163901--Sobic004G320600
Octagon: transcription factors


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