Gene annotation
| Transcriptome id | Sobic.005G082600.1 |
|---|---|
| Synonym | |
| Functional annotation | NADP-dependent oxidoreductase, putative, expressed |
| UniProt | A0A1B6PQY9 |
| Pfam | PF00107 PF16884 |
| Panther DB | PTHR11695 PTHR11695:SF572 |
| NCBI CDD | KOG1196; Predicted NAD-dependent oxidoreductase |
| KEGG Orthology | K07119; PTGR3, prostaglandin reductase 3 |
| Gene Ontology | GO:0016491; oxidoreductase activity GO:0008270zinc ion binding |
Orthologs (automatic annotation)
| TAIR | AT3G03080 : Zinc-binding dehydrogenase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os11g14910.1 : NADP-dependent oxidoreductase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a029567 , Zm00025a029568 , Zm00025a015602 |
| Brachypodium | PNT65294 |
| Barley | HORVU2Hr1G010250.1 , HORVU2Hr1G010250.2 |
| Wheat | TraesCS5B02G303700 , TraesCS5D02G103800 , TraesCS2A02G069900 , TraesCS5A02G303300 , TraesCS4A02G229900 , TraesCS5B02G303800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.010G102300 | expressed protein | - |
| 2 | Sobic.005G169100 | cytochrome P450, putative, expressed | - |
| 3 | Sobic.001G319700 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 4 | Sobic.001G342700 | protein phosphotase protein, putative, expressed | - |
| 5 | Sobic.006G107200 | molybdopterin biosynthesis protein CNX3, putative, expressed | K03639: moaA, GTP 3',8-cyclase |
| 6 | Sobic.002G182500 | nucleic acid binding protein, putative, expressed | - |
| 7 | Sobic.007G067350 | - | - |
| 8 | Sobic.003G164800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 9 | Sobic.004G304300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed | K15095: (+)-neomenthol dehydrogenase |
| 10 | Sobic.009G009400 | expressed protein | - |
| 11 | Sobic.002G195400 | "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed | K00083: cinnamyl-alcohol dehydrogenase |
| 12 | Sobic.007G067300 | Cupin domain containing protein, expressed | - |
| 13 | Sobic.007G067600 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed | - |
| 14 | Sobic.010G035700 | expressed protein | - |
| 15 | Sobic.007G066932 | - | - |
| 16 | Sobic.010G084300 | highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed | K05894: 12-oxophytodienoic acid reductase |
| 17 | Sobic.001G495164 | - | - |
| 18 | Sobic.001G231600 | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed | K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase |
| 19 | Sobic.001G330500 | polygalacturonase inhibitor 1 precursor, putative, expressed | - |
| 20 | Sobic.003G426000 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
Gene co-expression network
Octagon: transcription factors
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