Gene annotation
Transcriptome id Sobic.002G109300.1
Synonym ABCG11, WBC11, Sb02g009310, COF1, DSO, ATWBC11
Functional annotation white-brown complex homolog protein 11, putative, expressed
UniProt A0A1B6QAH1
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF260
NCBI CDD KOG0061; Transporter, ABC superfamily (Breast cancer resistance protein)
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G17840 : white-brown complex homolog protein 11
RAP-DB (Rice) LOC_Os07g18874.1 : white-brown complex homolog protein 11, putative, expressed
MaizeGDB (Corn) Zm00025a045631
Brachypodium KQJ81649 , KQJ81648 , KQK01686 , PNT60606 , PNT60604 , PNT60605
Barley -
Wheat TraesCS2A02G110200 , TraesCS2B02G128400 , TraesCS2B02G128800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G225400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
2 Sobic.006G084400 OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
3 Sobic.010G077250 - -
4 Sobic.004G347200 expressed protein -
5 Sobic.003G375700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.007G123800 DUF581 domain containing protein, expressed -
7 Sobic.009G185201 - -
8 Sobic.002G338800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
9 Sobic.007G108800 - -
10 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
11 Sobic.007G069000 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
12 Sobic.009G206300 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
13 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -
14 Sobic.008G064500 TPR domain protein, putative, expressed -
15 Sobic.002G216900 - -
16 Sobic.003G327800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
17 Sobic.005G038400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@RCN1 Centroradialis-like1 homogous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
18 Sobic.001G222600 cyanate hydratase, putative, expressed K01725: cyanate lyase
19 Sobic.009G210200 Acid phosphatase/vanadium-dependent haloperoxidase-related protein(PubMedID : 26465154)@Divergent PAP2 family domain containing protein, expressed -
20 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase


Gene co-expression network
sample Sobic002G109300 Sobic002G109300 Sobic002G225400 Sobic002G225400 Sobic002G109300--Sobic002G225400 Sobic006G084400 Sobic006G084400 Sobic002G109300--Sobic006G084400 Sobic010G077250 Sobic010G077250 Sobic002G109300--Sobic010G077250 Sobic004G347200 Sobic004G347200 Sobic002G109300--Sobic004G347200 Sobic003G375700 Sobic003G375700 Sobic002G109300--Sobic003G375700 Sobic007G123800 Sobic007G123800 Sobic002G109300--Sobic007G123800 Sobic009G185201 Sobic009G185201 Sobic002G109300--Sobic009G185201 Sobic002G338800 Sobic002G338800 Sobic002G109300--Sobic002G338800 Sobic007G108800 Sobic007G108800 Sobic002G109300--Sobic007G108800 Sobic002G225400--Sobic009G185201 Sobic002G225400--Sobic006G084400 Sobic002G225400--Sobic007G108800 Sobic009G206300 Sobic009G206300 Sobic002G225400--Sobic009G206300 Sobic005G038400 Sobic005G038400 Sobic002G225400--Sobic005G038400 Sobic010G259100 Sobic010G259100 Sobic002G225400--Sobic010G259100 Sobic002G225400--Sobic002G109300 Sobic002G225400--Sobic007G123800 Sobic002G225400--Sobic010G077250 Sobic006G084400--Sobic002G225400 Sobic001G500100 Sobic001G500100 Sobic006G084400--Sobic001G500100 Sobic001G033100 Sobic001G033100 Sobic006G084400--Sobic001G033100 Sobic001G222600 Sobic001G222600 Sobic006G084400--Sobic001G222600 Sobic006G084400--Sobic009G185201 Sobic006G084400--Sobic007G108800 Sobic009G210200 Sobic009G210200 Sobic006G084400--Sobic009G210200 Sobic006G084400--Sobic005G038400 Sobic006G084400--Sobic003G375700 Sobic002G128600 Sobic002G128600 Sobic010G077250--Sobic002G128600 Sobic010G120600 Sobic010G120600 Sobic010G077250--Sobic010G120600 Sobic007G069500 Sobic007G069500 Sobic010G077250--Sobic007G069500 Sobic006G227000 Sobic006G227000 Sobic010G077250--Sobic006G227000 Sobic004G038300 Sobic004G038300 Sobic010G077250--Sobic004G038300 Sobic001G249500 Sobic001G249500 Sobic010G077250--Sobic001G249500 Sobic010G077250--Sobic007G123800 Sobic001G379300 Sobic001G379300 Sobic010G077250--Sobic001G379300 Sobic003G317800 Sobic003G317800 Sobic010G077250--Sobic003G317800 Sobic001G166300 Sobic001G166300 Sobic004G347200--Sobic001G166300 Sobic004G347200--Sobic002G109300 Sobic004G347200--Sobic002G225400 Sobic008G065050 Sobic008G065050 Sobic004G347200--Sobic008G065050 Sobic007G069000 Sobic007G069000 Sobic004G347200--Sobic007G069000 Sobic004G347200--Sobic009G206300 Sobic006G177400 Sobic006G177400 Sobic004G347200--Sobic006G177400 Sobic004G347200--Sobic007G108800 Sobic001G374500 Sobic001G374500 Sobic004G347200--Sobic001G374500 Sobic008G064500 Sobic008G064500 Sobic003G375700--Sobic008G064500 Sobic003G375700--Sobic009G210200 Sobic003G370000 Sobic003G370000 Sobic003G375700--Sobic003G370000 Sobic008G061401 Sobic008G061401 Sobic003G375700--Sobic008G061401 Sobic004G028300 Sobic004G028300 Sobic003G375700--Sobic004G028300 Sobic003G375700--Sobic006G084400 Sobic006G140500 Sobic006G140500 Sobic003G375700--Sobic006G140500 Sobic006G235350 Sobic006G235350 Sobic003G375700--Sobic006G235350 Sobic007G133900 Sobic007G133900 Sobic003G375700--Sobic007G133900 Sobic009G131800 Sobic009G131800 Sobic007G123800--Sobic009G131800 Sobic007G123800--Sobic010G077250 Sobic007G075700 Sobic007G075700 Sobic007G123800--Sobic007G075700 Sobic004G020300 Sobic004G020300 Sobic007G123800--Sobic004G020300 Sobic004G055000 Sobic004G055000 Sobic007G123800--Sobic004G055000 Sobic003G022300 Sobic003G022300 Sobic007G123800--Sobic003G022300 Sobic004G280100 Sobic004G280100 Sobic007G123800--Sobic004G280100 Sobic004G343000 Sobic004G343000 Sobic007G123800--Sobic004G343000 Sobic007G123800--Sobic010G120600 Sobic009G185201--Sobic002G225400 Sobic009G185201--Sobic003G022300 Sobic009G185201--Sobic006G084400 Sobic009G185201--Sobic009G206300 Sobic009G185201--Sobic001G033100 Sobic009G185201--Sobic007G108800 Sobic003G131800 Sobic003G131800 Sobic009G185201--Sobic003G131800 Sobic009G185201--Sobic009G210200 Sobic003G042700 Sobic003G042700 Sobic009G185201--Sobic003G042700 Sobic001G112900 Sobic001G112900 Sobic002G338800--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic002G338800--Sobic003G339200 Sobic003G304300 Sobic003G304300 Sobic002G338800--Sobic003G304300 Sobic009G245000 Sobic009G245000 Sobic002G338800--Sobic009G245000 Sobic003G186800 Sobic003G186800 Sobic002G338800--Sobic003G186800 Sobic005G002400 Sobic005G002400 Sobic002G338800--Sobic005G002400 Sobic007G016600 Sobic007G016600 Sobic002G338800--Sobic007G016600 Sobic003G154400 Sobic003G154400 Sobic002G338800--Sobic003G154400 Sobic004G214800 Sobic004G214800 Sobic002G338800--Sobic004G214800 Sobic007G108800--Sobic005G038400 Sobic007G108800--Sobic006G084400 Sobic007G108800--Sobic002G225400 Sobic007G108800--Sobic009G185201 Sobic004G338100 Sobic004G338100 Sobic007G108800--Sobic004G338100 Sobic007G108800--Sobic010G259100 Sobic007G108800--Sobic007G069000 Sobic007G108800--Sobic001G033100 Sobic007G108800--Sobic003G131800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.