Gene annotation
Transcriptome id Sobic.002G125600.1
Synonym
Functional annotation -
UniProt A0A1B6QAU5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G220100 - -
2 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
3 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
4 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
5 Sobic.010G099700 peptide transporter PTR2, putative, expressed -
6 Sobic.004G082300 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
8 Sobic.001G333800 MYB family transcription factor, putative, expressed -
9 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
10 Sobic.001G251800 OsFBK23 - F-box domain and kelch repeat containing protein, expressed -
11 Sobic.002G056500 with no lysine (K) kinase 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
12 Sobic.003G372400 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
13 Sobic.007G136200 expressed protein -
14 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
16 Sobic.009G201300 - -
17 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
18 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.002G124600 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
20 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1


Gene co-expression network
sample Sobic002G125600 Sobic002G125600 Sobic003G220100 Sobic003G220100 Sobic002G125600--Sobic003G220100 Sobic005G106600 Sobic005G106600 Sobic002G125600--Sobic005G106600 Sobic009G038900 Sobic009G038900 Sobic002G125600--Sobic009G038900 Sobic010G085100 Sobic010G085100 Sobic002G125600--Sobic010G085100 Sobic010G099700 Sobic010G099700 Sobic002G125600--Sobic010G099700 Sobic004G082300 Sobic004G082300 Sobic002G125600--Sobic004G082300 Sobic005G068700 Sobic005G068700 Sobic002G125600--Sobic005G068700 Sobic001G333800 Sobic001G333800 Sobic002G125600--Sobic001G333800 Sobic005G101200 Sobic005G101200 Sobic002G125600--Sobic005G101200 Sobic003G220100--Sobic005G106600 Sobic003G220100--Sobic001G333800 Sobic004G312600 Sobic004G312600 Sobic003G220100--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic003G220100--Sobic007G058100 Sobic003G220100--Sobic009G038900 Sobic001G378100 Sobic001G378100 Sobic003G220100--Sobic001G378100 Sobic001G169900 Sobic001G169900 Sobic003G220100--Sobic001G169900 Sobic003G073800 Sobic003G073800 Sobic003G220100--Sobic003G073800 Sobic010G002700 Sobic010G002700 Sobic003G220100--Sobic010G002700 Sobic005G106600--Sobic003G220100 Sobic005G106600--Sobic001G333800 Sobic005G106600--Sobic009G038900 Sobic001G133000 Sobic001G133000 Sobic005G106600--Sobic001G133000 Sobic005G106600--Sobic004G312600 Sobic005G106600--Sobic007G058100 Sobic007G136200 Sobic007G136200 Sobic005G106600--Sobic007G136200 Sobic006G219600 Sobic006G219600 Sobic005G106600--Sobic006G219600 Sobic005G106600--Sobic001G378100 Sobic004G281800 Sobic004G281800 Sobic009G038900--Sobic004G281800 Sobic009G038900--Sobic005G101200 Sobic009G038900--Sobic005G106600 Sobic009G038900--Sobic005G068700 Sobic004G042200 Sobic004G042200 Sobic009G038900--Sobic004G042200 Sobic009G038900--Sobic003G220100 Sobic009G038900--Sobic001G333800 Sobic001G359300 Sobic001G359300 Sobic009G038900--Sobic001G359300 Sobic009G038900--Sobic010G085100 Sobic010G085100--Sobic005G101200 Sobic003G185900 Sobic003G185900 Sobic010G085100--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic010G085100--Sobic007G105500 Sobic002G404800 Sobic002G404800 Sobic010G085100--Sobic002G404800 Sobic004G215800 Sobic004G215800 Sobic010G085100--Sobic004G215800 Sobic008G140200 Sobic008G140200 Sobic010G085100--Sobic008G140200 Sobic003G036200 Sobic003G036200 Sobic010G085100--Sobic003G036200 Sobic008G033000 Sobic008G033000 Sobic010G085100--Sobic008G033000 Sobic004G154200 Sobic004G154200 Sobic010G085100--Sobic004G154200 Sobic010G099700--Sobic009G038900 Sobic004G356400 Sobic004G356400 Sobic010G099700--Sobic004G356400 Sobic008G094000 Sobic008G094000 Sobic010G099700--Sobic008G094000 Sobic002G056500 Sobic002G056500 Sobic010G099700--Sobic002G056500 Sobic004G169000 Sobic004G169000 Sobic010G099700--Sobic004G169000 Sobic003G343500 Sobic003G343500 Sobic010G099700--Sobic003G343500 Sobic010G099700--Sobic005G101200 Sobic010G099700--Sobic001G333800 Sobic006G133900 Sobic006G133900 Sobic010G099700--Sobic006G133900 Sobic004G082300--Sobic007G058100 Sobic009G256100 Sobic009G256100 Sobic004G082300--Sobic009G256100 Sobic008G129900 Sobic008G129900 Sobic004G082300--Sobic008G129900 Sobic009G038701 Sobic009G038701 Sobic004G082300--Sobic009G038701 Sobic001G258200 Sobic001G258200 Sobic004G082300--Sobic001G258200 Sobic002G382700 Sobic002G382700 Sobic004G082300--Sobic002G382700 Sobic003G097600 Sobic003G097600 Sobic004G082300--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic004G082300--Sobic001G263100 Sobic006G153400 Sobic006G153400 Sobic004G082300--Sobic006G153400 Sobic005G068700--Sobic001G258200 Sobic005G068700--Sobic005G101200 Sobic005G068700--Sobic003G185900 Sobic005G068700--Sobic002G056500 Sobic005G068700--Sobic008G129900 Sobic005G068700--Sobic008G033000 Sobic001G217900 Sobic001G217900 Sobic005G068700--Sobic001G217900 Sobic002G390100 Sobic002G390100 Sobic005G068700--Sobic002G390100 Sobic002G206300 Sobic002G206300 Sobic005G068700--Sobic002G206300 Sobic001G333800--Sobic001G359300 Sobic001G333800--Sobic005G106600 Sobic009G093100 Sobic009G093100 Sobic001G333800--Sobic009G093100 Sobic006G090100 Sobic006G090100 Sobic001G333800--Sobic006G090100 Sobic001G303200 Sobic001G303200 Sobic001G333800--Sobic001G303200 Sobic001G333800--Sobic003G220100 Sobic001G333800--Sobic009G038900 Sobic009G073900 Sobic009G073900 Sobic001G333800--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic001G333800--Sobic001G077300 Sobic004G189800 Sobic004G189800 Sobic005G101200--Sobic004G189800 Sobic005G101200--Sobic005G068700 Sobic005G101200--Sobic002G404800 Sobic005G101200--Sobic001G258200 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic005G101200--Sobic003G185900 Sobic005G101200--Sobic010G085100 Sobic005G101200--Sobic004G281800
Octagon: transcription factors


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