Gene annotation
| Transcriptome id | Sobic.002G134300.1 |
|---|---|
| Synonym | Sb02g011940 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) GDSL-like lipase/acylhydrolase, putative, expressed |
| UniProt | C5X5X8 |
| Pfam | PF00657 |
| Panther DB | PTHR22835 PTHR22835:SF216 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016788; hydrolase activity, acting on ester bonds |
Orthologs (automatic annotation)
| TAIR | AT5G03610 : GDSL-like Lipase/Acylhydrolase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os09g39430.1 : GDSL-like lipase/acylhydrolase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a023089 |
| Brachypodium | KQJ91582 |
| Barley | HORVU4Hr1G001420.24 , HORVU4Hr1G001420.22 , HORVU4Hr1G001420.23 , HORVU4Hr1G001420.21 , HORVU4Hr1G001420.17 , HORVU4Hr1G001420.16 , HORVU4Hr1G001420.15 , HORVU4Hr1G001420.14 , HORVU4Hr1G001420.13 , HORVU4Hr1G001420.12 , HORVU4Hr1G001420.11 , HORVU4Hr1G001420.10 , HORVU4Hr1G001420.19 , HORVU4Hr1G001420.18 , HORVU4Hr1G001420.8 , HORVU4Hr1G001420.7 , HORVU4Hr1G001420.6 , HORVU4Hr1G001420.5 , HORVU4Hr1G001420.4 , HORVU4Hr1G001420.3 , HORVU4Hr1G001420.2 , HORVU4Hr1G001420.1 , HORVU4Hr1G001420.20 |
| Wheat | TraesCS4D02G008000 , TraesCS4A02G304600 , TraesCS4D02G008500 , TraesCS4A02G304300 , TraesCS4B02G006600 , TraesCS4A02G304300 , TraesCS4D02G008000 , TraesCS4A02G304700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G176300 | RING finger protein, putative, expressed | - |
| 2 | Sobic.010G005200 | expressed protein | - |
| 3 | Sobic.001G021601 | - | - |
| 4 | Sobic.008G142400 | cycloartenol synthase, putative, expressed | - |
| 5 | Sobic.002G142000 | B3 DNA binding domain containing protein, expressed | - |
| 6 | Sobic.006G280400 | Up-reguralion under drought(PubMedID : 24916767)@phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed | K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase |
| 7 | Sobic.008G086700 | CRAL/TRIO domain containing protein, expressed | - |
| 8 | Sobic.002G311700 | UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed | - |
| 9 | Sobic.006G207700 | containing DUF163, putative, expressed | K00783: 23S rRNA (pseudouridine1915-N3)-methyltransferase |
| 10 | Sobic.007G226400 | pentatricopeptide, putative, expressed | - |
| 11 | Sobic.007G131600 | endonuclease/exonuclease/phosphatase family domain containing protein, expressed | - |
| 12 | Sobic.009G191900 | expressed protein | - |
| 13 | Sobic.010G162500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed | - |
| 14 | Sobic.007G028200 | cytokinin-O-glucosyltransferase 3, putative, expressed | - |
| 15 | Sobic.002G052600 | - | - |
| 16 | Sobic.005G030500 | OsRR10 type-A response regulator, expressed | K14492: two-component response regulator ARR-A family |
| 17 | Sobic.007G141300 | - | - |
| 18 | Sobic.001G445600 | DNA polymerase I, putative, expressed | - |
| 19 | Sobic.003G419000 | - | - |
| 20 | Sobic.006G076900 | anthocyanin regulatory Lc protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
