Gene annotation
Transcriptome id Sobic.002G177000.1
Synonym Sb02g022580, PPI1
Functional annotation proton pump interactor, putative, expressed
UniProt C5XAJ9
Pfam -
Panther DB PTHR32219 PTHR32219:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0010155; regulation of proton transport GO:0005886plasma membrane GO:0005783endoplasmic reticulum


Orthologs (automatic annotation)
TAIR AT4G27500 : proton pump interactor 1
RAP-DB (Rice) LOC_Os09g17730.2 : proton pump interactor, putative, expressed
MaizeGDB (Corn) Zm00025a013791 , Zm00025a046612
Brachypodium KQJ89908
Barley HORVU5Hr1G041880.1 , HORVU5Hr1G041880.2 , HORVU4Hr1G058930.6 , HORVU4Hr1G058930.5 , HORVU4Hr1G058930.4 , HORVU4Hr1G058930.3 , HORVU4Hr1G058930.2 , HORVU4Hr1G058930.1 , HORVU0Hr1G030120.2 , HORVU0Hr1G030120.3 , HORVU0Hr1G030120.1 , HORVU2Hr1G081330.1 , HORVU0Hr1G030120.4 , HORVU2Hr1G081330.2
Wheat TraesCS5A02G186800 , TraesCS5A02G186800 , TraesCS5B02G185200 , TraesCS5B02G185200 , TraesCS5D02G192100 , TraesCS5B02G185200
Populus -


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cDNA sequences
Sobic.002G177000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G068500 CUE domain containing protein, expressed -
2 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
3 Sobic.010G204400 phox domain-containing protein, putative, expressed -
4 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
5 Sobic.006G182200 WD domain, G-beta repeat domain containing protein, expressed -
6 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
7 Sobic.003G195500 SEY1, putative, expressed -
8 Sobic.006G208500 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
9 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
10 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
11 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
12 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
13 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
14 Sobic.010G275500 EF hand family protein, putative, expressed -
15 Sobic.010G116600 FHA domain containing protein, putative, expressed -
16 Sobic.007G046200 ELF7, putative, expressed K15174: RNA polymerase II-associated factor 1
17 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
18 Sobic.003G187500 ATP-binding region, ATPase-like domain containing protein, expressed -
19 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
20 Sobic.003G093800 - K03254: translation initiation factor 3 subunit A


Gene co-expression network
sample Sobic002G177000 Sobic002G177000 Sobic004G068500 Sobic004G068500 Sobic002G177000--Sobic004G068500 Sobic007G111100 Sobic007G111100 Sobic002G177000--Sobic007G111100 Sobic010G204400 Sobic010G204400 Sobic002G177000--Sobic010G204400 Sobic004G353000 Sobic004G353000 Sobic002G177000--Sobic004G353000 Sobic006G182200 Sobic006G182200 Sobic002G177000--Sobic006G182200 Sobic009G119000 Sobic009G119000 Sobic002G177000--Sobic009G119000 Sobic003G195500 Sobic003G195500 Sobic002G177000--Sobic003G195500 Sobic006G208500 Sobic006G208500 Sobic002G177000--Sobic006G208500 Sobic001G369000 Sobic001G369000 Sobic002G177000--Sobic001G369000 Sobic004G068500--Sobic007G111100 Sobic002G262700 Sobic002G262700 Sobic004G068500--Sobic002G262700 Sobic001G005600 Sobic001G005600 Sobic004G068500--Sobic001G005600 Sobic004G068500--Sobic002G177000 Sobic007G046200 Sobic007G046200 Sobic004G068500--Sobic007G046200 Sobic001G042200 Sobic001G042200 Sobic004G068500--Sobic001G042200 Sobic007G042900 Sobic007G042900 Sobic004G068500--Sobic007G042900 Sobic003G051200 Sobic003G051200 Sobic004G068500--Sobic003G051200 Sobic001G517500 Sobic001G517500 Sobic004G068500--Sobic001G517500 Sobic010G202600 Sobic010G202600 Sobic007G111100--Sobic010G202600 Sobic007G111100--Sobic002G262700 Sobic006G267300 Sobic006G267300 Sobic007G111100--Sobic006G267300 Sobic001G143500 Sobic001G143500 Sobic007G111100--Sobic001G143500 Sobic001G390500 Sobic001G390500 Sobic007G111100--Sobic001G390500 Sobic004G283000 Sobic004G283000 Sobic007G111100--Sobic004G283000 Sobic007G111100--Sobic004G068500 Sobic001G131800 Sobic001G131800 Sobic007G111100--Sobic001G131800 Sobic003G205501 Sobic003G205501 Sobic007G111100--Sobic003G205501 Sobic006G163800 Sobic006G163800 Sobic010G204400--Sobic006G163800 Sobic006G195700 Sobic006G195700 Sobic010G204400--Sobic006G195700 Sobic007G218000 Sobic007G218000 Sobic010G204400--Sobic007G218000 Sobic008G153000 Sobic008G153000 Sobic010G204400--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic010G204400--Sobic010G236400 Sobic007G132100 Sobic007G132100 Sobic010G204400--Sobic007G132100 Sobic003G416700 Sobic003G416700 Sobic010G204400--Sobic003G416700 Sobic006G131000 Sobic006G131000 Sobic010G204400--Sobic006G131000 Sobic010G116600 Sobic010G116600 Sobic010G204400--Sobic010G116600 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic009G143800 Sobic009G143800 Sobic004G353000--Sobic009G143800 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic002G371300 Sobic002G371300 Sobic004G353000--Sobic002G371300 Sobic002G371700 Sobic002G371700 Sobic004G353000--Sobic002G371700 Sobic009G044800 Sobic009G044800 Sobic004G353000--Sobic009G044800 Sobic001G473600 Sobic001G473600 Sobic004G353000--Sobic001G473600 Sobic001G291800 Sobic001G291800 Sobic004G353000--Sobic001G291800 Sobic004G274200 Sobic004G274200 Sobic006G182200--Sobic004G274200 Sobic006G182200--Sobic001G473600 Sobic001G016000 Sobic001G016000 Sobic006G182200--Sobic001G016000 Sobic006G182200--Sobic004G353000 Sobic001G360200 Sobic001G360200 Sobic006G182200--Sobic001G360200 Sobic006G182200--Sobic010G116600 Sobic001G466700 Sobic001G466700 Sobic006G182200--Sobic001G466700 Sobic004G339100 Sobic004G339100 Sobic006G182200--Sobic004G339100 Sobic002G283600 Sobic002G283600 Sobic006G182200--Sobic002G283600 Sobic002G153700 Sobic002G153700 Sobic009G119000--Sobic002G153700 Sobic003G059750 Sobic003G059750 Sobic009G119000--Sobic003G059750 Sobic002G071500 Sobic002G071500 Sobic009G119000--Sobic002G071500 Sobic010G065300 Sobic010G065300 Sobic009G119000--Sobic010G065300 Sobic009G119000--Sobic008G153000 Sobic010G275500 Sobic010G275500 Sobic009G119000--Sobic010G275500 Sobic009G119000--Sobic003G416700 Sobic004G048800 Sobic004G048800 Sobic009G119000--Sobic004G048800 Sobic001G311500 Sobic001G311500 Sobic009G119000--Sobic001G311500 Sobic001G065000 Sobic001G065000 Sobic003G195500--Sobic001G065000 Sobic006G012500 Sobic006G012500 Sobic003G195500--Sobic006G012500 Sobic001G534800 Sobic001G534800 Sobic003G195500--Sobic001G534800 Sobic004G039600 Sobic004G039600 Sobic003G195500--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic003G195500--Sobic004G178200 Sobic001G281100 Sobic001G281100 Sobic003G195500--Sobic001G281100 Sobic004G146500 Sobic004G146500 Sobic003G195500--Sobic004G146500 Sobic007G119200 Sobic007G119200 Sobic003G195500--Sobic007G119200 Sobic003G195500--Sobic006G131000 Sobic004G135400 Sobic004G135400 Sobic006G208500--Sobic004G135400 Sobic003G006400 Sobic003G006400 Sobic006G208500--Sobic003G006400 Sobic006G136400 Sobic006G136400 Sobic006G208500--Sobic006G136400 Sobic009G245800 Sobic009G245800 Sobic006G208500--Sobic009G245800 Sobic006G126100 Sobic006G126100 Sobic006G208500--Sobic006G126100 Sobic006G208500--Sobic004G039600 Sobic006G208500--Sobic006G200700 Sobic006G208500--Sobic001G369000 Sobic004G277200 Sobic004G277200 Sobic006G208500--Sobic004G277200 Sobic001G369000--Sobic004G039600 Sobic001G335900 Sobic001G335900 Sobic001G369000--Sobic001G335900 Sobic007G120500 Sobic007G120500 Sobic001G369000--Sobic007G120500 Sobic003G240700 Sobic003G240700 Sobic001G369000--Sobic003G240700 Sobic001G369000--Sobic006G163800 Sobic006G138000 Sobic006G138000 Sobic001G369000--Sobic006G138000 Sobic009G049400 Sobic009G049400 Sobic001G369000--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic001G369000--Sobic001G426600 Sobic009G229600 Sobic009G229600 Sobic001G369000--Sobic009G229600
Octagon: transcription factors


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