Gene annotation
Transcriptome id Sobic.002G231900.1,Sobic.002G231900.2
Synonym Sb02g027100, ATPUP3, PUP3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
purine permease, putative, expressed
UniProt C5X312 , C5X305
Pfam PF16913
Panther DB PTHR31376 PTHR31376:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G28220 : purine permease 3
RAP-DB (Rice) LOC_Os09g29239.1 : purine permease, putative, expressed
MaizeGDB (Corn) Zm00025a014114 , Zm00025a014115 , Zm00025a047326
Brachypodium KQJ82766
Barley HORVU5Hr1G069920.3 , HORVU5Hr1G069920.2 , HORVU5Hr1G069920.5 , HORVU5Hr1G069920.4 , HORVU5Hr1G069910.8 , HORVU5Hr1G069910.4 , HORVU5Hr1G069910.5 , HORVU5Hr1G069910.6 , HORVU5Hr1G069910.7 , HORVU5Hr1G069910.1 , HORVU5Hr1G069910.2 , HORVU5Hr1G069910.3 , HORVU5Hr1G069920.1
Wheat TraesCS5D02G254300 , TraesCS5B02G245100 , TraesCS5A02G247800
Populus -


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cDNA sequences
Sobic.002G231900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G107000 pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
2 Sobic.008G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
3 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
4 Sobic.001G319500 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.005G092900 - -
6 Sobic.001G066000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.009G043600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
9 Sobic.006G204300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
10 Sobic.006G264300 GA18008-PA, putative, expressed -
11 Sobic.004G049900 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
12 Sobic.010G243200 ZOS6-08 - C2H2 zinc finger protein, expressed K14816: pre-60S factor REI1
13 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -
14 Sobic.005G195100 expressed protein -
15 Sobic.004G304100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
16 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
17 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
18 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
20 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G231900 Sobic002G231900 Sobic007G107000 Sobic007G107000 Sobic002G231900--Sobic007G107000 Sobic008G059200 Sobic008G059200 Sobic002G231900--Sobic008G059200 Sobic002G212200 Sobic002G212200 Sobic002G231900--Sobic002G212200 Sobic001G319500 Sobic001G319500 Sobic002G231900--Sobic001G319500 Sobic005G092900 Sobic005G092900 Sobic002G231900--Sobic005G092900 Sobic001G066000 Sobic001G066000 Sobic002G231900--Sobic001G066000 Sobic009G043600 Sobic009G043600 Sobic002G231900--Sobic009G043600 Sobic003G181500 Sobic003G181500 Sobic002G231900--Sobic003G181500 Sobic006G204300 Sobic006G204300 Sobic002G231900--Sobic006G204300 Sobic009G070400 Sobic009G070400 Sobic007G107000--Sobic009G070400 Sobic001G025300 Sobic001G025300 Sobic007G107000--Sobic001G025300 Sobic002G183200 Sobic002G183200 Sobic007G107000--Sobic002G183200 Sobic009G221400 Sobic009G221400 Sobic007G107000--Sobic009G221400 Sobic003G286600 Sobic003G286600 Sobic007G107000--Sobic003G286600 Sobic010G176600 Sobic010G176600 Sobic007G107000--Sobic010G176600 Sobic007G107000--Sobic002G212200 Sobic002G393000 Sobic002G393000 Sobic007G107000--Sobic002G393000 Sobic007G025500 Sobic007G025500 Sobic007G107000--Sobic007G025500 Sobic001G281400 Sobic001G281400 Sobic008G059200--Sobic001G281400 Sobic009G177800 Sobic009G177800 Sobic008G059200--Sobic009G177800 Sobic010G149300 Sobic010G149300 Sobic008G059200--Sobic010G149300 Sobic001G399100 Sobic001G399100 Sobic008G059200--Sobic001G399100 Sobic006G173900 Sobic006G173900 Sobic008G059200--Sobic006G173900 Sobic004G187900 Sobic004G187900 Sobic008G059200--Sobic004G187900 Sobic002G423300 Sobic002G423300 Sobic008G059200--Sobic002G423300 Sobic002G211900 Sobic002G211900 Sobic008G059200--Sobic002G211900 Sobic001G288800 Sobic001G288800 Sobic008G059200--Sobic001G288800 Sobic005G228000 Sobic005G228000 Sobic002G212200--Sobic005G228000 Sobic001G019900 Sobic001G019900 Sobic002G212200--Sobic001G019900 Sobic001G067601 Sobic001G067601 Sobic002G212200--Sobic001G067601 Sobic002G212200--Sobic007G107000 Sobic002G212200--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic002G212200--Sobic003G162700 Sobic009G023200 Sobic009G023200 Sobic002G212200--Sobic009G023200 Sobic002G282400 Sobic002G282400 Sobic002G212200--Sobic002G282400 Sobic001G064800 Sobic001G064800 Sobic002G212200--Sobic001G064800 Sobic001G319500--Sobic006G173900 Sobic001G319600 Sobic001G319600 Sobic001G319500--Sobic001G319600 Sobic005G101800 Sobic005G101800 Sobic001G319500--Sobic005G101800 Sobic010G099900 Sobic010G099900 Sobic001G319500--Sobic010G099900 Sobic010G117900 Sobic010G117900 Sobic001G319500--Sobic010G117900 Sobic001G319500--Sobic002G393000 Sobic008G136400 Sobic008G136400 Sobic001G319500--Sobic008G136400 Sobic001G400700 Sobic001G400700 Sobic001G319500--Sobic001G400700 Sobic001G319500--Sobic002G183200 Sobic004G107700 Sobic004G107700 Sobic005G092900--Sobic004G107700 Sobic009G139400 Sobic009G139400 Sobic005G092900--Sobic009G139400 Sobic004G176600 Sobic004G176600 Sobic005G092900--Sobic004G176600 Sobic001G503100 Sobic001G503100 Sobic005G092900--Sobic001G503100 Sobic006G106800 Sobic006G106800 Sobic005G092900--Sobic006G106800 Sobic009G077800 Sobic009G077800 Sobic005G092900--Sobic009G077800 Sobic005G092900--Sobic001G400700 Sobic001G481400 Sobic001G481400 Sobic005G092900--Sobic001G481400 Sobic002G004900 Sobic002G004900 Sobic005G092900--Sobic002G004900 Sobic001G066000--Sobic009G043600 Sobic004G050000 Sobic004G050000 Sobic001G066000--Sobic004G050000 Sobic006G218300 Sobic006G218300 Sobic001G066000--Sobic006G218300 Sobic006G121500 Sobic006G121500 Sobic001G066000--Sobic006G121500 Sobic003G322900 Sobic003G322900 Sobic001G066000--Sobic003G322900 Sobic004G277000 Sobic004G277000 Sobic001G066000--Sobic004G277000 Sobic001G066000--Sobic001G319500 Sobic002G055600 Sobic002G055600 Sobic001G066000--Sobic002G055600 Sobic002G249000 Sobic002G249000 Sobic001G066000--Sobic002G249000 Sobic009G043600--Sobic004G050000 Sobic009G043600--Sobic001G066000 Sobic009G043600--Sobic004G277000 Sobic009G043600--Sobic006G121500 Sobic006G199100 Sobic006G199100 Sobic009G043600--Sobic006G199100 Sobic006G108400 Sobic006G108400 Sobic009G043600--Sobic006G108400 Sobic004G276100 Sobic004G276100 Sobic009G043600--Sobic004G276100 Sobic002G267500 Sobic002G267500 Sobic009G043600--Sobic002G267500 Sobic009G043600--Sobic001G400700 Sobic003G181500--Sobic004G187900 Sobic003G350300 Sobic003G350300 Sobic003G181500--Sobic003G350300 Sobic003G181500--Sobic010G149300 Sobic003G249800 Sobic003G249800 Sobic003G181500--Sobic003G249800 Sobic003G181500--Sobic001G288800 Sobic003G181500--Sobic001G281400 Sobic003G181500--Sobic009G023200 Sobic003G181500--Sobic002G211900 Sobic002G046100 Sobic002G046100 Sobic003G181500--Sobic002G046100 Sobic006G204300--Sobic002G046100 Sobic006G204300--Sobic001G025300 Sobic006G204300--Sobic002G267500 Sobic006G204300--Sobic002G183200 Sobic006G204300--Sobic002G282400 Sobic006G204300--Sobic007G107000 Sobic009G143400 Sobic009G143400 Sobic006G204300--Sobic009G143400 Sobic004G144500 Sobic004G144500 Sobic006G204300--Sobic004G144500 Sobic002G345300 Sobic002G345300 Sobic006G204300--Sobic002G345300
Octagon: transcription factors


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