Gene annotation
Transcriptome id Sobic.002G270766.1
Synonym -
Functional annotation -
UniProt A0A1W0W5W7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G182800 expressed protein -
2 Sobic.001G509400 - -
3 Sobic.001G140200 Homeobox domain containing protein, expressed -
4 Sobic.001G075101 - -
5 Sobic.008G044750 - -
6 Sobic.010G054500 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
7 Sobic.008G052500 receptor-like kinase, putative, expressed -
8 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
9 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
10 Sobic.009G128300 CUE domain containing protein, expressed -
11 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
12 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
13 Sobic.002G342100 no apical meristem protein, putative, expressed -
14 Sobic.002G023900 Homeobox domain containing protein, expressed -
15 Sobic.003G040800 WRKY102, expressed -
16 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
18 Sobic.007G153001 - -
19 Sobic.004G170032 - -
20 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -


Gene co-expression network
sample Sobic002G270766 Sobic002G270766 Sobic002G182800 Sobic002G182800 Sobic002G270766--Sobic002G182800 Sobic001G509400 Sobic001G509400 Sobic002G270766--Sobic001G509400 Sobic001G140200 Sobic001G140200 Sobic002G270766--Sobic001G140200 Sobic001G075101 Sobic001G075101 Sobic002G270766--Sobic001G075101 Sobic008G044750 Sobic008G044750 Sobic002G270766--Sobic008G044750 Sobic010G054500 Sobic010G054500 Sobic002G270766--Sobic010G054500 Sobic008G052500 Sobic008G052500 Sobic002G270766--Sobic008G052500 Sobic002G037400 Sobic002G037400 Sobic002G270766--Sobic002G037400 Sobic007G169600 Sobic007G169600 Sobic002G270766--Sobic007G169600 Sobic009G128300 Sobic009G128300 Sobic002G182800--Sobic009G128300 Sobic002G182800--Sobic001G509400 Sobic003G233900 Sobic003G233900 Sobic002G182800--Sobic003G233900 Sobic002G182800--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic002G182800--Sobic002G331450 Sobic003G227600 Sobic003G227600 Sobic002G182800--Sobic003G227600 Sobic003G040800 Sobic003G040800 Sobic002G182800--Sobic003G040800 Sobic010G085400 Sobic010G085400 Sobic002G182800--Sobic010G085400 Sobic002G342100 Sobic002G342100 Sobic002G182800--Sobic002G342100 Sobic001G509400--Sobic008G044750 Sobic001G509400--Sobic009G128300 Sobic001G509400--Sobic002G182800 Sobic001G509400--Sobic001G075101 Sobic001G509400--Sobic002G331450 Sobic002G325600 Sobic002G325600 Sobic001G509400--Sobic002G325600 Sobic003G079800 Sobic003G079800 Sobic001G509400--Sobic003G079800 Sobic001G509400--Sobic007G169600 Sobic001G509400--Sobic003G227600 Sobic001G140200--Sobic010G054500 Sobic001G140200--Sobic008G052500 Sobic001G140200--Sobic001G509400 Sobic001G140200--Sobic008G044750 Sobic008G065400 Sobic008G065400 Sobic001G140200--Sobic008G065400 Sobic001G140200--Sobic002G325600 Sobic001G140200--Sobic001G075101 Sobic001G140200--Sobic007G169600 Sobic005G079700 Sobic005G079700 Sobic001G140200--Sobic005G079700 Sobic001G075101--Sobic007G169600 Sobic006G203000 Sobic006G203000 Sobic001G075101--Sobic006G203000 Sobic001G075101--Sobic002G037400 Sobic003G083000 Sobic003G083000 Sobic001G075101--Sobic003G083000 Sobic001G075101--Sobic002G331450 Sobic007G153001 Sobic007G153001 Sobic001G075101--Sobic007G153001 Sobic001G075101--Sobic002G325600 Sobic001G075101--Sobic001G509400 Sobic001G075101--Sobic002G182800 Sobic008G044750--Sobic001G509400 Sobic008G044750--Sobic009G128300 Sobic008G044750--Sobic003G079800 Sobic008G044750--Sobic002G182800 Sobic008G044750--Sobic003G233900 Sobic008G044750--Sobic003G227600 Sobic003G198150 Sobic003G198150 Sobic008G044750--Sobic003G198150 Sobic003G066900 Sobic003G066900 Sobic008G044750--Sobic003G066900 Sobic008G044750--Sobic001G075101 Sobic010G054500--Sobic008G052500 Sobic010G054500--Sobic001G140200 Sobic005G016900 Sobic005G016900 Sobic010G054500--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic010G054500--Sobic007G143100 Sobic007G073750 Sobic007G073750 Sobic010G054500--Sobic007G073750 Sobic007G143200 Sobic007G143200 Sobic010G054500--Sobic007G143200 Sobic009G076700 Sobic009G076700 Sobic010G054500--Sobic009G076700 Sobic010G054500--Sobic007G169600 Sobic010G054500--Sobic002G325600 Sobic008G052500--Sobic010G054500 Sobic008G052500--Sobic001G140200 Sobic008G052500--Sobic002G325600 Sobic008G052500--Sobic005G016900 Sobic008G052500--Sobic007G143100 Sobic008G052500--Sobic001G509400 Sobic008G052500--Sobic007G169600 Sobic008G052500--Sobic001G075101 Sobic008G052500--Sobic007G143200 Sobic002G037400--Sobic006G203000 Sobic002G037400--Sobic007G169600 Sobic002G037400--Sobic001G075101 Sobic002G037400--Sobic003G083000 Sobic002G037400--Sobic002G331450 Sobic006G026400 Sobic006G026400 Sobic002G037400--Sobic006G026400 Sobic002G037400--Sobic009G076700 Sobic002G037400--Sobic007G143100 Sobic002G037400--Sobic005G016900 Sobic007G169600--Sobic001G075101 Sobic007G169600--Sobic003G083000 Sobic007G169600--Sobic002G331450 Sobic007G169600--Sobic002G037400 Sobic007G169600--Sobic006G203000 Sobic007G169600--Sobic005G016900 Sobic007G169600--Sobic007G143100 Sobic007G169600--Sobic002G325600 Sobic007G169600--Sobic007G143200
Octagon: transcription factors


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