Gene annotation
Transcriptome id Sobic.002G296600.1
Synonym Sb02g032770, ALIS5
Functional annotation cell cycle control protein, putative, expressed
UniProt C5X8E1
Pfam PF03381
Panther DB PTHR10926 PTHR10926:SF27
NCBI CDD KOG2952; Cell cycle control protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G79450 : ALA-interacting subunit 5
RAP-DB (Rice) LOC_Os09g38768.2 : cell cycle control protein, putative, expressed
MaizeGDB (Corn) Zm00025a044268 , Zm00025a047873
Brachypodium KQJ91482 , PNT65164 , PNT65165
Barley HORVU1Hr1G081400.10 , HORVU1Hr1G081400.11 , HORVU1Hr1G081400.4 , HORVU1Hr1G081400.5 , HORVU1Hr1G081400.7 , HORVU1Hr1G081400.1 , HORVU1Hr1G081400.2 , HORVU1Hr1G081400.3 , HORVU1Hr1G081400.8 , HORVU1Hr1G081400.9 , HORVU5Hr1G094000.10 , HORVU5Hr1G094000.11 , HORVU1Hr1G081400.6 , HORVU5Hr1G094000.12 , HORVU5Hr1G094000.13 , HORVU5Hr1G094000.14 , HORVU5Hr1G094000.15 , HORVU5Hr1G094000.16 , HORVU5Hr1G094000.17 , HORVU5Hr1G094000.18 , HORVU6Hr1G093390.4 , HORVU6Hr1G093390.1 , HORVU6Hr1G093390.2 , HORVU6Hr1G093390.3 , HORVU5Hr1G094000.2 , HORVU5Hr1G094000.3 , HORVU5Hr1G094000.1 , HORVU5Hr1G094000.6 , HORVU5Hr1G094000.7 , HORVU5Hr1G094000.5 , HORVU5Hr1G094000.8 , HORVU5Hr1G094000.9
Wheat TraesCS1A02G350000 , TraesCS1A02G350000 , TraesCS1A02G350000 , TraesCS1B02G364300 , TraesCS5B02G384100 , TraesCS5B02G384100 , TraesCS5D02G390300 , TraesCS5D02G390300 , TraesCS1D02G352700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G037800 ACT domain containing protein, expressed -
2 Sobic.002G230600 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
3 Sobic.004G324100 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
4 Sobic.003G378400 DUF803 domain containing, putative, expressed -
5 Sobic.003G104500 isoflavone reductase, putative, expressed -
6 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
7 Sobic.003G003800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 1, putative, expressed -
8 Sobic.009G079950 - -
9 Sobic.010G202300 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
11 Sobic.009G141400 transcriptional regulator, putative, expressed -
12 Sobic.008G193300 sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@"OsSUT2(Ortholog in rice:Eom et al., 2011)"(PubMedID : 31659914)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
13 Sobic.010G030300 serine threonine kinase, putative, expressed -
14 Sobic.003G376400 expressed protein -
15 Sobic.010G062500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
16 Sobic.003G193200 expressed protein -
17 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
18 Sobic.006G026100 expressed protein -
19 Sobic.006G155500 expressed protein -
20 Sobic.002G042400 FAD-linked oxidoreductase protein, putative, expressed K00102: LDHD, D-lactate dehydrogenase (cytochrome)


Gene co-expression network
sample Sobic002G296600 Sobic002G296600 Sobic008G037800 Sobic008G037800 Sobic002G296600--Sobic008G037800 Sobic002G230600 Sobic002G230600 Sobic002G296600--Sobic002G230600 Sobic004G324100 Sobic004G324100 Sobic002G296600--Sobic004G324100 Sobic003G378400 Sobic003G378400 Sobic002G296600--Sobic003G378400 Sobic003G104500 Sobic003G104500 Sobic002G296600--Sobic003G104500 Sobic006G271500 Sobic006G271500 Sobic002G296600--Sobic006G271500 Sobic003G003800 Sobic003G003800 Sobic002G296600--Sobic003G003800 Sobic009G079950 Sobic009G079950 Sobic002G296600--Sobic009G079950 Sobic010G202300 Sobic010G202300 Sobic002G296600--Sobic010G202300 Sobic002G072400 Sobic002G072400 Sobic008G037800--Sobic002G072400 Sobic004G252500 Sobic004G252500 Sobic008G037800--Sobic004G252500 Sobic004G165900 Sobic004G165900 Sobic008G037800--Sobic004G165900 Sobic006G155500 Sobic006G155500 Sobic008G037800--Sobic006G155500 Sobic010G062500 Sobic010G062500 Sobic008G037800--Sobic010G062500 Sobic004G300100 Sobic004G300100 Sobic008G037800--Sobic004G300100 Sobic008G037800--Sobic004G324100 Sobic003G108900 Sobic003G108900 Sobic008G037800--Sobic003G108900 Sobic004G307100 Sobic004G307100 Sobic008G037800--Sobic004G307100 Sobic002G230600--Sobic010G062500 Sobic004G113100 Sobic004G113100 Sobic002G230600--Sobic004G113100 Sobic002G230600--Sobic008G037800 Sobic001G167900 Sobic001G167900 Sobic002G230600--Sobic001G167900 Sobic004G124400 Sobic004G124400 Sobic002G230600--Sobic004G124400 Sobic004G154800 Sobic004G154800 Sobic002G230600--Sobic004G154800 Sobic006G265900 Sobic006G265900 Sobic002G230600--Sobic006G265900 Sobic002G351600 Sobic002G351600 Sobic002G230600--Sobic002G351600 Sobic004G305900 Sobic004G305900 Sobic002G230600--Sobic004G305900 Sobic004G324100--Sobic006G155500 Sobic009G141400 Sobic009G141400 Sobic004G324100--Sobic009G141400 Sobic001G118400 Sobic001G118400 Sobic004G324100--Sobic001G118400 Sobic003G328100 Sobic003G328100 Sobic004G324100--Sobic003G328100 Sobic006G140700 Sobic006G140700 Sobic004G324100--Sobic006G140700 Sobic004G324100--Sobic008G037800 Sobic004G281900 Sobic004G281900 Sobic004G324100--Sobic004G281900 Sobic006G026100 Sobic006G026100 Sobic004G324100--Sobic006G026100 Sobic001G286600 Sobic001G286600 Sobic004G324100--Sobic001G286600 Sobic001G462200 Sobic001G462200 Sobic003G378400--Sobic001G462200 Sobic001G486700 Sobic001G486700 Sobic003G378400--Sobic001G486700 Sobic002G428800 Sobic002G428800 Sobic003G378400--Sobic002G428800 Sobic001G279900 Sobic001G279900 Sobic003G378400--Sobic001G279900 Sobic008G118900 Sobic008G118900 Sobic003G378400--Sobic008G118900 Sobic004G290000 Sobic004G290000 Sobic003G378400--Sobic004G290000 Sobic008G135200 Sobic008G135200 Sobic003G378400--Sobic008G135200 Sobic006G238700 Sobic006G238700 Sobic003G378400--Sobic006G238700 Sobic008G103800 Sobic008G103800 Sobic003G378400--Sobic008G103800 Sobic002G281800 Sobic002G281800 Sobic003G104500--Sobic002G281800 Sobic003G291400 Sobic003G291400 Sobic003G104500--Sobic003G291400 Sobic001G404500 Sobic001G404500 Sobic003G104500--Sobic001G404500 Sobic002G281000 Sobic002G281000 Sobic003G104500--Sobic002G281000 Sobic009G254200 Sobic009G254200 Sobic003G104500--Sobic009G254200 Sobic003G104500--Sobic002G296600 Sobic002G115100 Sobic002G115100 Sobic003G104500--Sobic002G115100 Sobic004G096100 Sobic004G096100 Sobic003G104500--Sobic004G096100 Sobic003G292600 Sobic003G292600 Sobic003G104500--Sobic003G292600 Sobic006G271500--Sobic002G230600 Sobic002G128900 Sobic002G128900 Sobic006G271500--Sobic002G128900 Sobic004G238100 Sobic004G238100 Sobic006G271500--Sobic004G238100 Sobic009G155300 Sobic009G155300 Sobic006G271500--Sobic009G155300 Sobic004G121300 Sobic004G121300 Sobic006G271500--Sobic004G121300 Sobic001G261545 Sobic001G261545 Sobic006G271500--Sobic001G261545 Sobic010G050800 Sobic010G050800 Sobic006G271500--Sobic010G050800 Sobic001G085600 Sobic001G085600 Sobic006G271500--Sobic001G085600 Sobic006G271500--Sobic008G037800 Sobic006G263200 Sobic006G263200 Sobic003G003800--Sobic006G263200 Sobic003G003800--Sobic002G296600 Sobic010G112200 Sobic010G112200 Sobic003G003800--Sobic010G112200 Sobic006G226200 Sobic006G226200 Sobic003G003800--Sobic006G226200 Sobic003G231500 Sobic003G231500 Sobic003G003800--Sobic003G231500 Sobic010G232500 Sobic010G232500 Sobic003G003800--Sobic010G232500 Sobic007G223600 Sobic007G223600 Sobic003G003800--Sobic007G223600 Sobic003G101000 Sobic003G101000 Sobic003G003800--Sobic003G101000 Sobic003G236701 Sobic003G236701 Sobic003G003800--Sobic003G236701 Sobic009G079950--Sobic009G141400 Sobic003G306700 Sobic003G306700 Sobic009G079950--Sobic003G306700 Sobic006G214700 Sobic006G214700 Sobic009G079950--Sobic006G214700 Sobic010G231100 Sobic010G231100 Sobic009G079950--Sobic010G231100 Sobic004G300000 Sobic004G300000 Sobic009G079950--Sobic004G300000 Sobic001G207200 Sobic001G207200 Sobic009G079950--Sobic001G207200 Sobic006G201100 Sobic006G201100 Sobic009G079950--Sobic006G201100 Sobic010G207500 Sobic010G207500 Sobic009G079950--Sobic010G207500 Sobic001G450600 Sobic001G450600 Sobic009G079950--Sobic001G450600 Sobic002G353300 Sobic002G353300 Sobic010G202300--Sobic002G353300 Sobic003G324700 Sobic003G324700 Sobic010G202300--Sobic003G324700 Sobic003G386300 Sobic003G386300 Sobic010G202300--Sobic003G386300 Sobic003G439000 Sobic003G439000 Sobic010G202300--Sobic003G439000 Sobic001G469933 Sobic001G469933 Sobic010G202300--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic010G202300--Sobic001G122400 Sobic001G368500 Sobic001G368500 Sobic010G202300--Sobic001G368500 Sobic004G179200 Sobic004G179200 Sobic010G202300--Sobic004G179200 Sobic001G168800 Sobic001G168800 Sobic010G202300--Sobic001G168800
Octagon: transcription factors


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