Gene annotation
Transcriptome id Sobic.002G303900.1
Synonym Sb02g033420
Functional annotation CPuORF22 - conserved peptide uORF-containing transcript, expressed
UniProt A0A1W0W6D9
Pfam PF02358
Panther DB PTHR10788 PTHR10788:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G51460 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os02g44230.3 : CPuORF22 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a014640
Brachypodium KQK16218 , PNT75091 , PNT75090 , PNT75089
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G374400 chloride channel protein, putative, expressed K05016: chloride channel 7
2 Sobic.001G536200 expressed protein -
3 Sobic.006G208700 - -
4 Sobic.003G017000 - -
5 Sobic.002G176900 proton pump interactor, putative, expressed -
6 Sobic.006G218100 expressed protein -
7 Sobic.007G090439 - -
8 Sobic.009G054200 pentatricopeptide, putative, expressed -
9 Sobic.010G266100 endoglucanase, putative, expressed -
10 Sobic.002G223000 emp24/gp25L/p24 family protein, putative, expressed -
11 Sobic.001G006500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsFBDUF19 - F-box and DUF domain containing protein, expressed -
12 Sobic.007G002500 OsFBT12 - F-box and tubby domain containing protein, expressed -
13 Sobic.009G236700 DUF1645 domain containing protein, putative, expressed -
14 Sobic.002G397650 - -
15 Sobic.001G010200 expressed protein -
16 Sobic.003G017300 CTP synthase, putative, expressed K01937: pyrG, CTP synthase
17 Sobic.002G174100 - -
18 Sobic.009G192933 - -
19 Sobic.005G138900 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
20 Sobic.003G336300 C2 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G303900 Sobic002G303900 Sobic003G374400 Sobic003G374400 Sobic002G303900--Sobic003G374400 Sobic001G536200 Sobic001G536200 Sobic002G303900--Sobic001G536200 Sobic006G208700 Sobic006G208700 Sobic002G303900--Sobic006G208700 Sobic003G017000 Sobic003G017000 Sobic002G303900--Sobic003G017000 Sobic002G176900 Sobic002G176900 Sobic002G303900--Sobic002G176900 Sobic006G218100 Sobic006G218100 Sobic002G303900--Sobic006G218100 Sobic007G090439 Sobic007G090439 Sobic002G303900--Sobic007G090439 Sobic009G054200 Sobic009G054200 Sobic002G303900--Sobic009G054200 Sobic010G266100 Sobic010G266100 Sobic002G303900--Sobic010G266100 Sobic002G174100 Sobic002G174100 Sobic003G374400--Sobic002G174100 Sobic003G374400--Sobic007G090439 Sobic003G374400--Sobic002G303900 Sobic003G374400--Sobic002G176900 Sobic003G374400--Sobic001G536200 Sobic003G374400--Sobic006G218100 Sobic001G003400 Sobic001G003400 Sobic003G374400--Sobic001G003400 Sobic001G332400 Sobic001G332400 Sobic003G374400--Sobic001G332400 Sobic004G323500 Sobic004G323500 Sobic003G374400--Sobic004G323500 Sobic001G536200--Sobic006G218100 Sobic004G188201 Sobic004G188201 Sobic001G536200--Sobic004G188201 Sobic001G536200--Sobic003G374400 Sobic002G252700 Sobic002G252700 Sobic001G536200--Sobic002G252700 Sobic001G536200--Sobic002G303900 Sobic001G536200--Sobic002G176900 Sobic001G536200--Sobic009G054200 Sobic009G031700 Sobic009G031700 Sobic001G536200--Sobic009G031700 Sobic005G204900 Sobic005G204900 Sobic001G536200--Sobic005G204900 Sobic009G162550 Sobic009G162550 Sobic006G208700--Sobic009G162550 Sobic002G176800 Sobic002G176800 Sobic006G208700--Sobic002G176800 Sobic009G036366 Sobic009G036366 Sobic006G208700--Sobic009G036366 Sobic006G208700--Sobic009G054200 Sobic002G337500 Sobic002G337500 Sobic006G208700--Sobic002G337500 Sobic003G017300 Sobic003G017300 Sobic006G208700--Sobic003G017300 Sobic001G410300 Sobic001G410300 Sobic006G208700--Sobic001G410300 Sobic010G210050 Sobic010G210050 Sobic006G208700--Sobic010G210050 Sobic010G043700 Sobic010G043700 Sobic006G208700--Sobic010G043700 Sobic002G397650 Sobic002G397650 Sobic003G017000--Sobic002G397650 Sobic006G109600 Sobic006G109600 Sobic003G017000--Sobic006G109600 Sobic002G175700 Sobic002G175700 Sobic003G017000--Sobic002G175700 Sobic005G055501 Sobic005G055501 Sobic003G017000--Sobic005G055501 Sobic003G017000--Sobic007G090439 Sobic005G031901 Sobic005G031901 Sobic003G017000--Sobic005G031901 Sobic003G126750 Sobic003G126750 Sobic003G017000--Sobic003G126750 Sobic010G147300 Sobic010G147300 Sobic003G017000--Sobic010G147300 Sobic001G261464 Sobic001G261464 Sobic003G017000--Sobic001G261464 Sobic002G176900--Sobic010G266100 Sobic001G251500 Sobic001G251500 Sobic002G176900--Sobic001G251500 Sobic005G023100 Sobic005G023100 Sobic002G176900--Sobic005G023100 Sobic002G176900--Sobic003G374400 Sobic002G176900--Sobic006G218100 Sobic007G213200 Sobic007G213200 Sobic002G176900--Sobic007G213200 Sobic003G002900 Sobic003G002900 Sobic002G176900--Sobic003G002900 Sobic005G138900 Sobic005G138900 Sobic002G176900--Sobic005G138900 Sobic002G176900--Sobic001G536200 Sobic006G218100--Sobic007G213200 Sobic005G160900 Sobic005G160900 Sobic006G218100--Sobic005G160900 Sobic007G184300 Sobic007G184300 Sobic006G218100--Sobic007G184300 Sobic002G241900 Sobic002G241900 Sobic006G218100--Sobic002G241900 Sobic003G270700 Sobic003G270700 Sobic006G218100--Sobic003G270700 Sobic010G096500 Sobic010G096500 Sobic006G218100--Sobic010G096500 Sobic006G218100--Sobic005G138900 Sobic006G218100--Sobic010G266100 Sobic006G218100--Sobic001G536200 Sobic007G090439--Sobic002G174100 Sobic010G027400 Sobic010G027400 Sobic007G090439--Sobic010G027400 Sobic002G285001 Sobic002G285001 Sobic007G090439--Sobic002G285001 Sobic008G025550 Sobic008G025550 Sobic007G090439--Sobic008G025550 Sobic007G090439--Sobic001G003400 Sobic007G090439--Sobic003G374400 Sobic003G079532 Sobic003G079532 Sobic007G090439--Sobic003G079532 Sobic007G220150 Sobic007G220150 Sobic007G090439--Sobic007G220150 Sobic003G017900 Sobic003G017900 Sobic007G090439--Sobic003G017900 Sobic009G054200--Sobic003G017300 Sobic006G269300 Sobic006G269300 Sobic009G054200--Sobic006G269300 Sobic009G106300 Sobic009G106300 Sobic009G054200--Sobic009G106300 Sobic003G159400 Sobic003G159400 Sobic009G054200--Sobic003G159400 Sobic001G391800 Sobic001G391800 Sobic009G054200--Sobic001G391800 Sobic010G220100 Sobic010G220100 Sobic009G054200--Sobic010G220100 Sobic006G260101 Sobic006G260101 Sobic009G054200--Sobic006G260101 Sobic002G118400 Sobic002G118400 Sobic009G054200--Sobic002G118400 Sobic009G181900 Sobic009G181900 Sobic009G054200--Sobic009G181900 Sobic010G266100--Sobic007G213200 Sobic010G266100--Sobic002G176900 Sobic004G082000 Sobic004G082000 Sobic010G266100--Sobic004G082000 Sobic010G266100--Sobic006G218100 Sobic010G266100--Sobic003G270700 Sobic009G236700 Sobic009G236700 Sobic010G266100--Sobic009G236700 Sobic010G266100--Sobic002G241900 Sobic010G266100--Sobic010G096500 Sobic010G266100--Sobic007G184300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.