Gene annotation
Transcriptome id Sobic.002G328600.1
Synonym Sb02g035520
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5XAS6
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF101
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G26830 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os07g35350.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a022261 , Zm00025a048296 , Zm00025a048291 , Zm00025a014851
Brachypodium KQK15883
Barley HORVU2Hr1G044460.4 , HORVU2Hr1G044460.2 , HORVU2Hr1G044460.3 , HORVU2Hr1G044460.1 , HORVU2Hr1G044450.8 , HORVU2Hr1G044450.7 , HORVU2Hr1G044450.6 , HORVU2Hr1G044450.4 , HORVU2Hr1G044450.3 , HORVU2Hr1G044450.1 , HORVU6Hr1G079630.7 , HORVU6Hr1G079630.6 , HORVU6Hr1G079630.5 , HORVU6Hr1G079630.4 , HORVU6Hr1G079630.3 , HORVU6Hr1G079630.2 , HORVU6Hr1G079630.1
Wheat TraesCS2D02G221800 , TraesCS6D02G305000 , TraesCS6B02G355600 , TraesCS7B02G285700 , TraesCS7B02G285700 , TraesCS2A02G216200 , TraesCS6A02G325300 , TraesCS2B02G241200 , TraesCS2B02G241300 , TraesCS5A02G338400 , TraesCS5A02G338400 , TraesCS5A02G338400 , TraesCS5A02G338400 , TraesCS2B02G241200 , TraesCS2B02G241200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
2 Sobic.005G092000 resistance protein, putative, expressed -
3 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
4 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
5 Sobic.006G161800 integral membrane protein, putative, expressed -
6 Sobic.008G013800 lectin-like receptor kinase 1, putative, expressed -
7 Sobic.003G083200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin binding protein, putative, expressed -
8 Sobic.008G037900 transcription factor, putative, expressed K14431: transcription factor TGA
9 Sobic.010G192366 - -
10 Sobic.001G483600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase APK1B, chloroplast precursor, putative, expressed -
11 Sobic.002G167000 "C3 PTPC, housekeeping gene"(PubMedID : 2308851)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
12 Sobic.002G081800 RGH1A, putative, expressed -
13 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
14 Sobic.004G078800 transcription factor, putative, expressed K14431: transcription factor TGA
15 Sobic.005G230200 GRAS family transcription factor domain containing protein, expressed -
16 Sobic.006G101200 cytokinin-O-glucosyltransferase 2, putative, expressed -
17 Sobic.001G169400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.007G014200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.005G049600 OsWAK46 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.010G192432 - K14431: transcription factor TGA


Gene co-expression network
sample Sobic002G328600 Sobic002G328600 Sobic003G227700 Sobic003G227700 Sobic002G328600--Sobic003G227700 Sobic005G092000 Sobic005G092000 Sobic002G328600--Sobic005G092000 Sobic006G191100 Sobic006G191100 Sobic002G328600--Sobic006G191100 Sobic010G069900 Sobic010G069900 Sobic002G328600--Sobic010G069900 Sobic006G161800 Sobic006G161800 Sobic002G328600--Sobic006G161800 Sobic008G013800 Sobic008G013800 Sobic002G328600--Sobic008G013800 Sobic003G083200 Sobic003G083200 Sobic002G328600--Sobic003G083200 Sobic008G037900 Sobic008G037900 Sobic002G328600--Sobic008G037900 Sobic010G192366 Sobic010G192366 Sobic002G328600--Sobic010G192366 Sobic003G227700--Sobic010G069900 Sobic003G257400 Sobic003G257400 Sobic003G227700--Sobic003G257400 Sobic010G071400 Sobic010G071400 Sobic003G227700--Sobic010G071400 Sobic006G003100 Sobic006G003100 Sobic003G227700--Sobic006G003100 Sobic001G006201 Sobic001G006201 Sobic003G227700--Sobic001G006201 Sobic007G158800 Sobic007G158800 Sobic003G227700--Sobic007G158800 Sobic003G000100 Sobic003G000100 Sobic003G227700--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic003G227700--Sobic010G152400 Sobic004G106100 Sobic004G106100 Sobic003G227700--Sobic004G106100 Sobic010G035900 Sobic010G035900 Sobic005G092000--Sobic010G035900 Sobic002G081800 Sobic002G081800 Sobic005G092000--Sobic002G081800 Sobic005G022200 Sobic005G022200 Sobic005G092000--Sobic005G022200 Sobic002G081850 Sobic002G081850 Sobic005G092000--Sobic002G081850 Sobic007G172500 Sobic007G172500 Sobic005G092000--Sobic007G172500 Sobic002G167000 Sobic002G167000 Sobic005G092000--Sobic002G167000 Sobic004G172100 Sobic004G172100 Sobic005G092000--Sobic004G172100 Sobic004G339800 Sobic004G339800 Sobic005G092000--Sobic004G339800 Sobic007G009500 Sobic007G009500 Sobic005G092000--Sobic007G009500 Sobic005G195600 Sobic005G195600 Sobic006G191100--Sobic005G195600 Sobic006G087900 Sobic006G087900 Sobic006G191100--Sobic006G087900 Sobic006G076201 Sobic006G076201 Sobic006G191100--Sobic006G076201 Sobic002G362900 Sobic002G362900 Sobic006G191100--Sobic002G362900 Sobic006G191100--Sobic010G069900 Sobic003G016600 Sobic003G016600 Sobic006G191100--Sobic003G016600 Sobic006G191100--Sobic003G227700 Sobic001G113700 Sobic001G113700 Sobic006G191100--Sobic001G113700 Sobic007G221100 Sobic007G221100 Sobic006G191100--Sobic007G221100 Sobic010G069900--Sobic003G227700 Sobic010G069900--Sobic010G071400 Sobic004G212300 Sobic004G212300 Sobic010G069900--Sobic004G212300 Sobic010G192432 Sobic010G192432 Sobic010G069900--Sobic010G192432 Sobic010G069900--Sobic001G006201 Sobic001G483600 Sobic001G483600 Sobic010G069900--Sobic001G483600 Sobic009G102600 Sobic009G102600 Sobic010G069900--Sobic009G102600 Sobic010G101900 Sobic010G101900 Sobic010G069900--Sobic010G101900 Sobic004G078800 Sobic004G078800 Sobic010G069900--Sobic004G078800 Sobic004G111100 Sobic004G111100 Sobic006G161800--Sobic004G111100 Sobic006G161800--Sobic002G328600 Sobic006G161800--Sobic003G227700 Sobic005G127200 Sobic005G127200 Sobic006G161800--Sobic005G127200 Sobic004G266700 Sobic004G266700 Sobic006G161800--Sobic004G266700 Sobic009G162300 Sobic009G162300 Sobic006G161800--Sobic009G162300 Sobic001G068500 Sobic001G068500 Sobic006G161800--Sobic001G068500 Sobic010G093300 Sobic010G093300 Sobic006G161800--Sobic010G093300 Sobic001G413700 Sobic001G413700 Sobic006G161800--Sobic001G413700 Sobic001G506900 Sobic001G506900 Sobic008G013800--Sobic001G506900 Sobic005G219500 Sobic005G219500 Sobic008G013800--Sobic005G219500 Sobic004G177000 Sobic004G177000 Sobic008G013800--Sobic004G177000 Sobic001G218400 Sobic001G218400 Sobic008G013800--Sobic001G218400 Sobic006G087300 Sobic006G087300 Sobic008G013800--Sobic006G087300 Sobic002G366200 Sobic002G366200 Sobic008G013800--Sobic002G366200 Sobic006G097900 Sobic006G097900 Sobic008G013800--Sobic006G097900 Sobic004G121600 Sobic004G121600 Sobic008G013800--Sobic004G121600 Sobic001G014700 Sobic001G014700 Sobic008G013800--Sobic001G014700 Sobic003G083200--Sobic004G177000 Sobic007G014200 Sobic007G014200 Sobic003G083200--Sobic007G014200 Sobic010G001300 Sobic010G001300 Sobic003G083200--Sobic010G001300 Sobic003G083200--Sobic010G192366 Sobic005G033000 Sobic005G033000 Sobic003G083200--Sobic005G033000 Sobic003G083200--Sobic003G227700 Sobic006G101900 Sobic006G101900 Sobic003G083200--Sobic006G101900 Sobic003G040600 Sobic003G040600 Sobic003G083200--Sobic003G040600 Sobic002G183750 Sobic002G183750 Sobic003G083200--Sobic002G183750 Sobic010G097200 Sobic010G097200 Sobic008G037900--Sobic010G097200 Sobic007G220400 Sobic007G220400 Sobic008G037900--Sobic007G220400 Sobic006G205700 Sobic006G205700 Sobic008G037900--Sobic006G205700 Sobic002G111900 Sobic002G111900 Sobic008G037900--Sobic002G111900 Sobic010G241900 Sobic010G241900 Sobic008G037900--Sobic010G241900 Sobic009G065700 Sobic009G065700 Sobic008G037900--Sobic009G065700 Sobic003G441800 Sobic003G441800 Sobic008G037900--Sobic003G441800 Sobic003G167300 Sobic003G167300 Sobic008G037900--Sobic003G167300 Sobic002G391400 Sobic002G391400 Sobic008G037900--Sobic002G391400 Sobic010G192366--Sobic010G192432 Sobic010G192366--Sobic010G097200 Sobic010G192366--Sobic001G483600 Sobic004G119800 Sobic004G119800 Sobic010G192366--Sobic004G119800 Sobic010G192366--Sobic008G037900 Sobic006G196400 Sobic006G196400 Sobic010G192366--Sobic006G196400 Sobic005G080600 Sobic005G080600 Sobic010G192366--Sobic005G080600 Sobic006G135300 Sobic006G135300 Sobic010G192366--Sobic006G135300 Sobic007G100700 Sobic007G100700 Sobic010G192366--Sobic007G100700
Octagon: transcription factors


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