Gene annotation
Transcriptome id Sobic.003G077800.1
Synonym ATSGT1B, Sb03g006570, SGT1B, RPR1, EDM1, ETA3
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
suppressor of G2 allele of SKP1, putative, expressed
UniProt C5XQ56
Pfam PF13414 PF04969 PF05002
Panther DB PTHR22904 PTHR22904:SF344
NCBI CDD KOG1309; Suppressor of G2 allele of skp1
KEGG Orthology K12795; SUGT1, suppressor of G2 allele of SKP1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11260 : phosphatase-related
RAP-DB (Rice) LOC_Os01g43540.1 : suppressor of G2 allele of SKP1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G182500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.001G138700 - -
3 Sobic.010G234100 - -
4 Sobic.008G174850 - -
5 Sobic.004G259800 acetyltransferase, GNAT family, putative, expressed K00621: GNPNAT1, glucosamine-phosphate N-acetyltransferase
6 Sobic.006G217950 - -
7 Sobic.005G035950 - -
8 Sobic.003G427400 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
9 Sobic.002G242100 expressed protein -
10 Sobic.009G134766 - -
11 Sobic.001G060600 cell division control protein 2 homolog 3, putative, expressed K08818: cell division cycle 2-like
12 Sobic.010G207250 - -
13 Sobic.008G040800 OsFBX396 - F-box domain containing protein, expressed -
14 Sobic.010G117000 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
15 Sobic.009G085001 - -
16 Sobic.003G417500 ZOS1-23 - C2H2 zinc finger protein, expressed -
17 Sobic.003G327300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G530000 expressed protein K19323: ataxin-10
19 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
20 Sobic.003G163801 - -


Gene co-expression network
sample Sobic003G077800 Sobic003G077800 Sobic009G182500 Sobic009G182500 Sobic003G077800--Sobic009G182500 Sobic001G138700 Sobic001G138700 Sobic003G077800--Sobic001G138700 Sobic010G234100 Sobic010G234100 Sobic003G077800--Sobic010G234100 Sobic008G174850 Sobic008G174850 Sobic003G077800--Sobic008G174850 Sobic004G259800 Sobic004G259800 Sobic003G077800--Sobic004G259800 Sobic006G217950 Sobic006G217950 Sobic003G077800--Sobic006G217950 Sobic005G035950 Sobic005G035950 Sobic003G077800--Sobic005G035950 Sobic003G427400 Sobic003G427400 Sobic003G077800--Sobic003G427400 Sobic002G242100 Sobic002G242100 Sobic003G077800--Sobic002G242100 Sobic004G338200 Sobic004G338200 Sobic009G182500--Sobic004G338200 Sobic001G020200 Sobic001G020200 Sobic009G182500--Sobic001G020200 Sobic008G040800 Sobic008G040800 Sobic009G182500--Sobic008G040800 Sobic009G161700 Sobic009G161700 Sobic009G182500--Sobic009G161700 Sobic003G314200 Sobic003G314200 Sobic009G182500--Sobic003G314200 Sobic009G182500--Sobic003G077800 Sobic008G191200 Sobic008G191200 Sobic009G182500--Sobic008G191200 Sobic004G176950 Sobic004G176950 Sobic009G182500--Sobic004G176950 Sobic010G132100 Sobic010G132100 Sobic009G182500--Sobic010G132100 Sobic001G138700--Sobic006G217950 Sobic004G204300 Sobic004G204300 Sobic001G138700--Sobic004G204300 Sobic009G200750 Sobic009G200750 Sobic001G138700--Sobic009G200750 Sobic006G252532 Sobic006G252532 Sobic001G138700--Sobic006G252532 Sobic008G110151 Sobic008G110151 Sobic001G138700--Sobic008G110151 Sobic003G199650 Sobic003G199650 Sobic001G138700--Sobic003G199650 Sobic004G020500 Sobic004G020500 Sobic001G138700--Sobic004G020500 Sobic010G023066 Sobic010G023066 Sobic001G138700--Sobic010G023066 Sobic003G188700 Sobic003G188700 Sobic001G138700--Sobic003G188700 Sobic001G060600 Sobic001G060600 Sobic010G234100--Sobic001G060600 Sobic009G158200 Sobic009G158200 Sobic010G234100--Sobic009G158200 Sobic001G512100 Sobic001G512100 Sobic010G234100--Sobic001G512100 Sobic001G339000 Sobic001G339000 Sobic010G234100--Sobic001G339000 Sobic006G205800 Sobic006G205800 Sobic010G234100--Sobic006G205800 Sobic002G215866 Sobic002G215866 Sobic010G234100--Sobic002G215866 Sobic004G279900 Sobic004G279900 Sobic010G234100--Sobic004G279900 Sobic003G079466 Sobic003G079466 Sobic010G234100--Sobic003G079466 Sobic007G149400 Sobic007G149400 Sobic010G234100--Sobic007G149400 Sobic001G376332 Sobic001G376332 Sobic008G174850--Sobic001G376332 Sobic006G113301 Sobic006G113301 Sobic008G174850--Sobic006G113301 Sobic007G182700 Sobic007G182700 Sobic008G174850--Sobic007G182700 Sobic001G235600 Sobic001G235600 Sobic008G174850--Sobic001G235600 Sobic006G250350 Sobic006G250350 Sobic008G174850--Sobic006G250350 Sobic008G081100 Sobic008G081100 Sobic008G174850--Sobic008G081100 Sobic008G174200 Sobic008G174200 Sobic008G174850--Sobic008G174200 Sobic008G174850--Sobic004G259800 Sobic009G078401 Sobic009G078401 Sobic008G174850--Sobic009G078401 Sobic002G145600 Sobic002G145600 Sobic004G259800--Sobic002G145600 Sobic004G259800--Sobic010G132100 Sobic004G259800--Sobic008G174850 Sobic001G449300 Sobic001G449300 Sobic004G259800--Sobic001G449300 Sobic002G248800 Sobic002G248800 Sobic004G259800--Sobic002G248800 Sobic009G134766 Sobic009G134766 Sobic004G259800--Sobic009G134766 Sobic009G255400 Sobic009G255400 Sobic004G259800--Sobic009G255400 Sobic002G075300 Sobic002G075300 Sobic004G259800--Sobic002G075300 Sobic007G177901 Sobic007G177901 Sobic004G259800--Sobic007G177901 Sobic006G217950--Sobic001G138700 Sobic005G071500 Sobic005G071500 Sobic006G217950--Sobic005G071500 Sobic006G217950--Sobic004G204300 Sobic006G217950--Sobic009G200750 Sobic002G248201 Sobic002G248201 Sobic006G217950--Sobic002G248201 Sobic002G363466 Sobic002G363466 Sobic006G217950--Sobic002G363466 Sobic003G417500 Sobic003G417500 Sobic006G217950--Sobic003G417500 Sobic001G020900 Sobic001G020900 Sobic006G217950--Sobic001G020900 Sobic006G217950--Sobic004G020500 Sobic001G042100 Sobic001G042100 Sobic005G035950--Sobic001G042100 Sobic005G035950--Sobic004G259800 Sobic005G035950--Sobic007G182700 Sobic005G035950--Sobic001G060600 Sobic005G035950--Sobic003G077800 Sobic003G185800 Sobic003G185800 Sobic005G035950--Sobic003G185800 Sobic005G035950--Sobic010G234100 Sobic005G035950--Sobic006G250350 Sobic005G197900 Sobic005G197900 Sobic005G035950--Sobic005G197900 Sobic006G163033 Sobic006G163033 Sobic003G427400--Sobic006G163033 Sobic003G076100 Sobic003G076100 Sobic003G427400--Sobic003G076100 Sobic001G052500 Sobic001G052500 Sobic003G427400--Sobic001G052500 Sobic007G122866 Sobic007G122866 Sobic003G427400--Sobic007G122866 Sobic004G271100 Sobic004G271100 Sobic003G427400--Sobic004G271100 Sobic001G349300 Sobic001G349300 Sobic003G427400--Sobic001G349300 Sobic003G427400--Sobic006G205800 Sobic003G427400--Sobic003G314200 Sobic003G427400--Sobic004G338200 Sobic002G242100--Sobic007G122866 Sobic003G383400 Sobic003G383400 Sobic002G242100--Sobic003G383400 Sobic010G030600 Sobic010G030600 Sobic002G242100--Sobic010G030600 Sobic002G242100--Sobic001G052500 Sobic001G194401 Sobic001G194401 Sobic002G242100--Sobic001G194401 Sobic002G117300 Sobic002G117300 Sobic002G242100--Sobic002G117300 Sobic002G361600 Sobic002G361600 Sobic002G242100--Sobic002G361600 Sobic002G242100--Sobic010G234100 Sobic002G242100--Sobic003G076100
Octagon: transcription factors


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