Gene annotation
Transcriptome id Sobic.003G087900.6,Sobic.003G087900.1,Sobic.003G087900.5,Sobic.003G087900.3,Sobic.003G087900.4
Synonym PMI1, Sb03g007380, MEE31
Functional annotation mannose-6-phosphate isomerase, putative, expressed
UniProt A0A1W0VWD5 , A0A1W0VW99 , A0A1B6Q259 , A0A1B6Q241 , A0A1W0VWD2
Pfam PF01238
Panther DB PTHR10309 PTHR10309:SF3
NCBI CDD KOG2757; Mannose-6-phosphate isomerase
KEGG Orthology K01809; manA, mannose-6-phosphate isomerase
Gene Ontology GO:0008270; zinc ion binding GO:0005975carbohydrate metabolic process GO:0004476mannose-6-phosphate isomerase activity GO:0009298GDP-mannose biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G02570 : Mannose-6-phosphate isomerase, type I
RAP-DB (Rice) LOC_Os01g03710.1 : mannose-6-phosphate isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a040906 , Zm00025a023642 , Zm00025a035537 , Zm00025a029441
Brachypodium KQK02513
Barley HORVU3Hr1G003940.4 , HORVU3Hr1G003940.6 , HORVU3Hr1G003940.1 , HORVU3Hr1G003940.3 , HORVU3Hr1G003940.2 , HORVU3Hr1G003950.4 , HORVU3Hr1G003950.2 , HORVU3Hr1G003950.3 , HORVU3Hr1G003950.1
Wheat TraesCS3D02G036100 , TraesCS3A02G044800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G115500 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
2 Sobic.010G075700 - -
3 Sobic.001G291200 - -
4 Sobic.006G000700 - -
5 Sobic.001G258000 tyrosine protein kinase domain containing protein, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
6 Sobic.002G120300 flavin monooxygenase, putative, expressed K11816: indole-3-pyruvate monooxygenase
7 Sobic.005G053900 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
8 Sobic.001G418700 SLT1 protein, putative, expressed -
9 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
10 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
11 Sobic.004G349300 tyrosine protein kinase domain containing protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
12 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
13 Sobic.001G053900 nodulin, putative, expressed -
14 Sobic.009G033100 OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
15 Sobic.007G159000 heat shock protein DnaJ, putative, expressed -
16 Sobic.001G384500 leucine-rich repeat family protein, putative, expressed -
17 Sobic.002G293000 IDD5(PubMedID : 24676859)@ZOS9-17 - C2H2 zinc finger protein, expressed -
18 Sobic.009G148900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
19 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
20 Sobic.006G271800 potasium efflux antiporter protein, putative, expressed -


Gene co-expression network
sample Sobic003G087900 Sobic003G087900 Sobic010G115500 Sobic010G115500 Sobic003G087900--Sobic010G115500 Sobic010G075700 Sobic010G075700 Sobic003G087900--Sobic010G075700 Sobic001G291200 Sobic001G291200 Sobic003G087900--Sobic001G291200 Sobic006G000700 Sobic006G000700 Sobic003G087900--Sobic006G000700 Sobic001G258000 Sobic001G258000 Sobic003G087900--Sobic001G258000 Sobic002G120300 Sobic002G120300 Sobic003G087900--Sobic002G120300 Sobic005G053900 Sobic005G053900 Sobic003G087900--Sobic005G053900 Sobic001G418700 Sobic001G418700 Sobic003G087900--Sobic001G418700 Sobic009G017400 Sobic009G017400 Sobic003G087900--Sobic009G017400 Sobic010G115500--Sobic003G087900 Sobic010G123400 Sobic010G123400 Sobic010G115500--Sobic010G123400 Sobic010G115500--Sobic001G258000 Sobic010G115500--Sobic002G120300 Sobic006G259700 Sobic006G259700 Sobic010G115500--Sobic006G259700 Sobic008G046800 Sobic008G046800 Sobic010G115500--Sobic008G046800 Sobic010G115500--Sobic005G053900 Sobic001G057200 Sobic001G057200 Sobic010G115500--Sobic001G057200 Sobic010G115500--Sobic006G000700 Sobic005G096300 Sobic005G096300 Sobic010G075700--Sobic005G096300 Sobic004G113800 Sobic004G113800 Sobic010G075700--Sobic004G113800 Sobic010G075700--Sobic003G087900 Sobic010G075700--Sobic001G258000 Sobic004G189900 Sobic004G189900 Sobic010G075700--Sobic004G189900 Sobic008G073900 Sobic008G073900 Sobic010G075700--Sobic008G073900 Sobic003G408400 Sobic003G408400 Sobic010G075700--Sobic003G408400 Sobic005G008001 Sobic005G008001 Sobic010G075700--Sobic005G008001 Sobic010G075700--Sobic001G291200 Sobic001G053900 Sobic001G053900 Sobic001G291200--Sobic001G053900 Sobic001G240800 Sobic001G240800 Sobic001G291200--Sobic001G240800 Sobic006G053700 Sobic006G053700 Sobic001G291200--Sobic006G053700 Sobic002G376700 Sobic002G376700 Sobic001G291200--Sobic002G376700 Sobic004G096300 Sobic004G096300 Sobic001G291200--Sobic004G096300 Sobic003G284300 Sobic003G284300 Sobic001G291200--Sobic003G284300 Sobic003G108600 Sobic003G108600 Sobic001G291200--Sobic003G108600 Sobic003G391100 Sobic003G391100 Sobic001G291200--Sobic003G391100 Sobic010G214600 Sobic010G214600 Sobic001G291200--Sobic010G214600 Sobic004G253100 Sobic004G253100 Sobic006G000700--Sobic004G253100 Sobic003G196900 Sobic003G196900 Sobic006G000700--Sobic003G196900 Sobic009G050900 Sobic009G050900 Sobic006G000700--Sobic009G050900 Sobic001G219600 Sobic001G219600 Sobic006G000700--Sobic001G219600 Sobic010G053600 Sobic010G053600 Sobic006G000700--Sobic010G053600 Sobic006G000700--Sobic009G017400 Sobic009G047200 Sobic009G047200 Sobic006G000700--Sobic009G047200 Sobic002G313400 Sobic002G313400 Sobic006G000700--Sobic002G313400 Sobic008G011100 Sobic008G011100 Sobic006G000700--Sobic008G011100 Sobic007G079700 Sobic007G079700 Sobic001G258000--Sobic007G079700 Sobic001G427500 Sobic001G427500 Sobic001G258000--Sobic001G427500 Sobic001G258000--Sobic005G096300 Sobic009G114800 Sobic009G114800 Sobic001G258000--Sobic009G114800 Sobic004G027900 Sobic004G027900 Sobic001G258000--Sobic004G027900 Sobic004G349300 Sobic004G349300 Sobic001G258000--Sobic004G349300 Sobic007G062500 Sobic007G062500 Sobic001G258000--Sobic007G062500 Sobic001G258000--Sobic001G053900 Sobic004G181500 Sobic004G181500 Sobic001G258000--Sobic004G181500 Sobic002G120400 Sobic002G120400 Sobic002G120300--Sobic002G120400 Sobic004G323900 Sobic004G323900 Sobic002G120300--Sobic004G323900 Sobic009G033100 Sobic009G033100 Sobic002G120300--Sobic009G033100 Sobic002G120300--Sobic010G115500 Sobic004G106300 Sobic004G106300 Sobic002G120300--Sobic004G106300 Sobic003G192600 Sobic003G192600 Sobic002G120300--Sobic003G192600 Sobic002G120300--Sobic005G053900 Sobic002G120300--Sobic003G087900 Sobic006G000600 Sobic006G000600 Sobic002G120300--Sobic006G000600 Sobic005G053900--Sobic010G115500 Sobic005G053900--Sobic002G120300 Sobic005G053900--Sobic003G087900 Sobic005G053900--Sobic009G033100 Sobic005G053900--Sobic006G000700 Sobic002G009600 Sobic002G009600 Sobic005G053900--Sobic002G009600 Sobic010G227950 Sobic010G227950 Sobic005G053900--Sobic010G227950 Sobic009G183200 Sobic009G183200 Sobic005G053900--Sobic009G183200 Sobic002G301500 Sobic002G301500 Sobic005G053900--Sobic002G301500 Sobic001G433000 Sobic001G433000 Sobic001G418700--Sobic001G433000 Sobic007G136800 Sobic007G136800 Sobic001G418700--Sobic007G136800 Sobic001G065600 Sobic001G065600 Sobic001G418700--Sobic001G065600 Sobic003G003600 Sobic003G003600 Sobic001G418700--Sobic003G003600 Sobic004G174400 Sobic004G174400 Sobic001G418700--Sobic004G174400 Sobic003G442700 Sobic003G442700 Sobic001G418700--Sobic003G442700 Sobic001G073900 Sobic001G073900 Sobic001G418700--Sobic001G073900 Sobic003G343500 Sobic003G343500 Sobic001G418700--Sobic003G343500 Sobic003G396200 Sobic003G396200 Sobic001G418700--Sobic003G396200 Sobic006G199200 Sobic006G199200 Sobic009G017400--Sobic006G199200 Sobic001G493200 Sobic001G493200 Sobic009G017400--Sobic001G493200 Sobic004G021200 Sobic004G021200 Sobic009G017400--Sobic004G021200 Sobic002G276100 Sobic002G276100 Sobic009G017400--Sobic002G276100 Sobic001G281600 Sobic001G281600 Sobic009G017400--Sobic001G281600 Sobic003G266001 Sobic003G266001 Sobic009G017400--Sobic003G266001 Sobic009G017400--Sobic002G313400 Sobic002G122600 Sobic002G122600 Sobic009G017400--Sobic002G122600 Sobic010G205800 Sobic010G205800 Sobic009G017400--Sobic010G205800
Octagon: transcription factors


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