Gene annotation
Transcriptome id Sobic.006G000700.1
Synonym
Functional annotation -
UniProt A0A1B6PJA0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G253100 armadillo/beta-catenin repeat family protein, putative, expressed -
2 Sobic.003G196900 esterase/lipase/thioesterase, putative, expressed K06889: uncharacterized protein
3 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
4 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
5 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
6 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
7 Sobic.009G047200 protein kinase domain containing protein, expressed -
8 Sobic.002G313400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12815: DHX38, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16
9 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
10 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
11 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
12 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
13 Sobic.004G023100 protein binding protein, putative, expressed -
14 Sobic.009G002300 expressed protein -
15 Sobic.010G094900 protein kinase, putative, expressed -
16 Sobic.001G540800 DNA binding protein, putative, expressed -
17 Sobic.002G391600 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2
18 Sobic.009G033100 OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
19 Sobic.001G539016 - -
20 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic006G000700 Sobic006G000700 Sobic004G253100 Sobic004G253100 Sobic006G000700--Sobic004G253100 Sobic003G196900 Sobic003G196900 Sobic006G000700--Sobic003G196900 Sobic009G050900 Sobic009G050900 Sobic006G000700--Sobic009G050900 Sobic001G219600 Sobic001G219600 Sobic006G000700--Sobic001G219600 Sobic010G053600 Sobic010G053600 Sobic006G000700--Sobic010G053600 Sobic009G017400 Sobic009G017400 Sobic006G000700--Sobic009G017400 Sobic009G047200 Sobic009G047200 Sobic006G000700--Sobic009G047200 Sobic002G313400 Sobic002G313400 Sobic006G000700--Sobic002G313400 Sobic008G011100 Sobic008G011100 Sobic006G000700--Sobic008G011100 Sobic001G540800 Sobic001G540800 Sobic004G253100--Sobic001G540800 Sobic004G253100--Sobic006G000700 Sobic004G290000 Sobic004G290000 Sobic004G253100--Sobic004G290000 Sobic004G023100 Sobic004G023100 Sobic004G253100--Sobic004G023100 Sobic004G253100--Sobic010G053600 Sobic004G144400 Sobic004G144400 Sobic004G253100--Sobic004G144400 Sobic009G002300 Sobic009G002300 Sobic004G253100--Sobic009G002300 Sobic004G176000 Sobic004G176000 Sobic004G253100--Sobic004G176000 Sobic008G082500 Sobic008G082500 Sobic004G253100--Sobic008G082500 Sobic003G196900--Sobic009G050900 Sobic001G281600 Sobic001G281600 Sobic003G196900--Sobic001G281600 Sobic001G096300 Sobic001G096300 Sobic003G196900--Sobic001G096300 Sobic002G122600 Sobic002G122600 Sobic003G196900--Sobic002G122600 Sobic009G112400 Sobic009G112400 Sobic003G196900--Sobic009G112400 Sobic008G083000 Sobic008G083000 Sobic003G196900--Sobic008G083000 Sobic010G279700 Sobic010G279700 Sobic003G196900--Sobic010G279700 Sobic009G215800 Sobic009G215800 Sobic003G196900--Sobic009G215800 Sobic010G268300 Sobic010G268300 Sobic003G196900--Sobic010G268300 Sobic003G141500 Sobic003G141500 Sobic009G050900--Sobic003G141500 Sobic007G203200 Sobic007G203200 Sobic009G050900--Sobic007G203200 Sobic009G050900--Sobic001G281600 Sobic009G050900--Sobic008G083000 Sobic009G050900--Sobic001G219600 Sobic007G071200 Sobic007G071200 Sobic009G050900--Sobic007G071200 Sobic009G050900--Sobic008G011100 Sobic001G493200 Sobic001G493200 Sobic009G050900--Sobic001G493200 Sobic010G140400 Sobic010G140400 Sobic009G050900--Sobic010G140400 Sobic009G260500 Sobic009G260500 Sobic001G219600--Sobic009G260500 Sobic002G309600 Sobic002G309600 Sobic001G219600--Sobic002G309600 Sobic002G317200 Sobic002G317200 Sobic001G219600--Sobic002G317200 Sobic001G219600--Sobic009G047200 Sobic001G219600--Sobic003G141500 Sobic010G139000 Sobic010G139000 Sobic001G219600--Sobic010G139000 Sobic001G071400 Sobic001G071400 Sobic001G219600--Sobic001G071400 Sobic002G397500 Sobic002G397500 Sobic001G219600--Sobic002G397500 Sobic001G020000 Sobic001G020000 Sobic001G219600--Sobic001G020000 Sobic001G352900 Sobic001G352900 Sobic010G053600--Sobic001G352900 Sobic002G391600 Sobic002G391600 Sobic010G053600--Sobic002G391600 Sobic009G109200 Sobic009G109200 Sobic010G053600--Sobic009G109200 Sobic001G004400 Sobic001G004400 Sobic010G053600--Sobic001G004400 Sobic007G171100 Sobic007G171100 Sobic010G053600--Sobic007G171100 Sobic004G260100 Sobic004G260100 Sobic010G053600--Sobic004G260100 Sobic006G036100 Sobic006G036100 Sobic010G053600--Sobic006G036100 Sobic004G248600 Sobic004G248600 Sobic010G053600--Sobic004G248600 Sobic004G242400 Sobic004G242400 Sobic010G053600--Sobic004G242400 Sobic006G199200 Sobic006G199200 Sobic009G017400--Sobic006G199200 Sobic009G017400--Sobic001G493200 Sobic004G021200 Sobic004G021200 Sobic009G017400--Sobic004G021200 Sobic002G276100 Sobic002G276100 Sobic009G017400--Sobic002G276100 Sobic009G017400--Sobic001G281600 Sobic003G266001 Sobic003G266001 Sobic009G017400--Sobic003G266001 Sobic009G017400--Sobic002G313400 Sobic009G017400--Sobic002G122600 Sobic010G205800 Sobic010G205800 Sobic009G017400--Sobic010G205800 Sobic009G047200--Sobic001G219600 Sobic003G072200 Sobic003G072200 Sobic009G047200--Sobic003G072200 Sobic009G047200--Sobic002G397500 Sobic003G408600 Sobic003G408600 Sobic009G047200--Sobic003G408600 Sobic009G047200--Sobic001G071400 Sobic001G002000 Sobic001G002000 Sobic009G047200--Sobic001G002000 Sobic004G329400 Sobic004G329400 Sobic009G047200--Sobic004G329400 Sobic009G047200--Sobic002G317200 Sobic009G047200--Sobic002G309600 Sobic002G313400--Sobic001G219600 Sobic002G313400--Sobic009G260500 Sobic002G313400--Sobic002G309600 Sobic002G313400--Sobic008G011100 Sobic002G313400--Sobic001G002000 Sobic007G117400 Sobic007G117400 Sobic002G313400--Sobic007G117400 Sobic001G111600 Sobic001G111600 Sobic002G313400--Sobic001G111600 Sobic008G047800 Sobic008G047800 Sobic002G313400--Sobic008G047800 Sobic002G313400--Sobic001G493200 Sobic008G011100--Sobic001G219600 Sobic004G039200 Sobic004G039200 Sobic008G011100--Sobic004G039200 Sobic004G087600 Sobic004G087600 Sobic008G011100--Sobic004G087600 Sobic002G031400 Sobic002G031400 Sobic008G011100--Sobic002G031400 Sobic008G011100--Sobic009G260500 Sobic004G018300 Sobic004G018300 Sobic008G011100--Sobic004G018300 Sobic001G167200 Sobic001G167200 Sobic008G011100--Sobic001G167200 Sobic009G065100 Sobic009G065100 Sobic008G011100--Sobic009G065100 Sobic001G311500 Sobic001G311500 Sobic008G011100--Sobic001G311500
Octagon: transcription factors


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