Gene annotation
Transcriptome id Sobic.010G094900.1,Sobic.010G094900.2
Synonym Sb10g008270
Functional annotation protein kinase, putative, expressed
UniProt A0A1W0VS84 , A0A194YI63
Pfam PF14381 PF14381 PF07714
Panther DB PTHR23257 PTHR23257:SF481
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G18160 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os06g12590.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a049451 , Zm00025a022021
Brachypodium KQK18836 , KQK01959
Barley HORVU7Hr1G038650.5 , HORVU7Hr1G038650.4 , HORVU7Hr1G038650.3 , HORVU7Hr1G038650.2 , HORVU7Hr1G038650.1
Wheat TraesCS7D02G191400 , TraesCS7D02G191400 , TraesCS7D02G191400 , TraesCS7D02G191400 , TraesCS7A02G190300 , TraesCS7A02G190300 , TraesCS7A02G190300 , TraesCS7A02G190300 , TraesCS6B02G337200 , TraesCS7A02G190300 , TraesCS6B02G337200 , TraesCS7B02G095300 , TraesCS7B02G095300 , TraesCS7B02G095300 , TraesCS7B02G095300 , TraesCS7B02G095300 , TraesCS7B02G095300 , TraesCS6A02G308500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G137000 protein kinase, putative, expressed -
2 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
3 Sobic.008G130100 protein kinase family protein, putative, expressed -
4 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
5 Sobic.004G181600 calmodulin binding protein, putative, expressed -
6 Sobic.001G203400 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
7 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
8 Sobic.002G313400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12815: DHX38, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16
9 Sobic.001G289600 BAH domain containing protein, putative, expressed -
10 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
11 Sobic.010G010700 PHD-finger family protein, expressed -
12 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
13 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
14 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
15 Sobic.001G002000 protein kinase domain containing protein, expressed -
16 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
17 Sobic.010G013800 START domain containing protein, expressed -
18 Sobic.010G176550 - -
19 Sobic.001G365900 PWWP domain containing protein, expressed -
20 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin


Gene co-expression network
sample Sobic010G094900 Sobic010G094900 Sobic002G137000 Sobic002G137000 Sobic010G094900--Sobic002G137000 Sobic010G256700 Sobic010G256700 Sobic010G094900--Sobic010G256700 Sobic008G130100 Sobic008G130100 Sobic010G094900--Sobic008G130100 Sobic004G034900 Sobic004G034900 Sobic010G094900--Sobic004G034900 Sobic004G181600 Sobic004G181600 Sobic010G094900--Sobic004G181600 Sobic001G203400 Sobic001G203400 Sobic010G094900--Sobic001G203400 Sobic007G116200 Sobic007G116200 Sobic010G094900--Sobic007G116200 Sobic002G313400 Sobic002G313400 Sobic010G094900--Sobic002G313400 Sobic001G289600 Sobic001G289600 Sobic010G094900--Sobic001G289600 Sobic002G137000--Sobic010G094900 Sobic002G276100 Sobic002G276100 Sobic002G137000--Sobic002G276100 Sobic008G146900 Sobic008G146900 Sobic002G137000--Sobic008G146900 Sobic002G137000--Sobic008G130100 Sobic002G168500 Sobic002G168500 Sobic002G137000--Sobic002G168500 Sobic004G026500 Sobic004G026500 Sobic002G137000--Sobic004G026500 Sobic002G345700 Sobic002G345700 Sobic002G137000--Sobic002G345700 Sobic002G137000--Sobic004G181600 Sobic003G381200 Sobic003G381200 Sobic002G137000--Sobic003G381200 Sobic010G256700--Sobic007G116200 Sobic003G396200 Sobic003G396200 Sobic010G256700--Sobic003G396200 Sobic006G182900 Sobic006G182900 Sobic010G256700--Sobic006G182900 Sobic001G159400 Sobic001G159400 Sobic010G256700--Sobic001G159400 Sobic010G248700 Sobic010G248700 Sobic010G256700--Sobic010G248700 Sobic007G193700 Sobic007G193700 Sobic010G256700--Sobic007G193700 Sobic006G133900 Sobic006G133900 Sobic010G256700--Sobic006G133900 Sobic001G454500 Sobic001G454500 Sobic010G256700--Sobic001G454500 Sobic002G104100 Sobic002G104100 Sobic010G256700--Sobic002G104100 Sobic001G365900 Sobic001G365900 Sobic008G130100--Sobic001G365900 Sobic008G130100--Sobic001G454500 Sobic008G130100--Sobic006G133900 Sobic010G010700 Sobic010G010700 Sobic008G130100--Sobic010G010700 Sobic003G155100 Sobic003G155100 Sobic008G130100--Sobic003G155100 Sobic008G130100--Sobic004G034900 Sobic002G346200 Sobic002G346200 Sobic008G130100--Sobic002G346200 Sobic010G206900 Sobic010G206900 Sobic008G130100--Sobic010G206900 Sobic007G198300 Sobic007G198300 Sobic008G130100--Sobic007G198300 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic002G411600 Sobic002G411600 Sobic004G034900--Sobic002G411600 Sobic001G540400 Sobic001G540400 Sobic004G034900--Sobic001G540400 Sobic003G422500 Sobic003G422500 Sobic004G034900--Sobic003G422500 Sobic004G276400 Sobic004G276400 Sobic004G034900--Sobic004G276400 Sobic002G008900 Sobic002G008900 Sobic004G034900--Sobic002G008900 Sobic007G062800 Sobic007G062800 Sobic004G034900--Sobic007G062800 Sobic004G181600--Sobic006G133900 Sobic006G065600 Sobic006G065600 Sobic004G181600--Sobic006G065600 Sobic004G181600--Sobic002G104100 Sobic005G075100 Sobic005G075100 Sobic004G181600--Sobic005G075100 Sobic007G167100 Sobic007G167100 Sobic004G181600--Sobic007G167100 Sobic004G181600--Sobic008G130100 Sobic006G219600 Sobic006G219600 Sobic004G181600--Sobic006G219600 Sobic004G181600--Sobic003G155100 Sobic004G178500 Sobic004G178500 Sobic004G181600--Sobic004G178500 Sobic005G187300 Sobic005G187300 Sobic001G203400--Sobic005G187300 Sobic001G085600 Sobic001G085600 Sobic001G203400--Sobic001G085600 Sobic004G023100 Sobic004G023100 Sobic001G203400--Sobic004G023100 Sobic001G203400--Sobic010G094900 Sobic001G261545 Sobic001G261545 Sobic001G203400--Sobic001G261545 Sobic003G196300 Sobic003G196300 Sobic001G203400--Sobic003G196300 Sobic001G203400--Sobic006G219600 Sobic005G059800 Sobic005G059800 Sobic001G203400--Sobic005G059800 Sobic010G032900 Sobic010G032900 Sobic001G203400--Sobic010G032900 Sobic006G216800 Sobic006G216800 Sobic007G116200--Sobic006G216800 Sobic007G116200--Sobic010G010700 Sobic002G134200 Sobic002G134200 Sobic007G116200--Sobic002G134200 Sobic007G116200--Sobic006G182900 Sobic004G359800 Sobic004G359800 Sobic007G116200--Sobic004G359800 Sobic010G139000 Sobic010G139000 Sobic007G116200--Sobic010G139000 Sobic007G116200--Sobic010G256700 Sobic004G209600 Sobic004G209600 Sobic007G116200--Sobic004G209600 Sobic003G280800 Sobic003G280800 Sobic007G116200--Sobic003G280800 Sobic001G219600 Sobic001G219600 Sobic002G313400--Sobic001G219600 Sobic009G260500 Sobic009G260500 Sobic002G313400--Sobic009G260500 Sobic002G309600 Sobic002G309600 Sobic002G313400--Sobic002G309600 Sobic008G011100 Sobic008G011100 Sobic002G313400--Sobic008G011100 Sobic001G002000 Sobic001G002000 Sobic002G313400--Sobic001G002000 Sobic007G117400 Sobic007G117400 Sobic002G313400--Sobic007G117400 Sobic001G111600 Sobic001G111600 Sobic002G313400--Sobic001G111600 Sobic008G047800 Sobic008G047800 Sobic002G313400--Sobic008G047800 Sobic001G493200 Sobic001G493200 Sobic002G313400--Sobic001G493200 Sobic001G289600--Sobic001G540400 Sobic001G289600--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic001G289600--Sobic001G289800 Sobic001G289600--Sobic003G422500 Sobic001G289600--Sobic001G365900 Sobic009G191000 Sobic009G191000 Sobic001G289600--Sobic009G191000 Sobic005G008800 Sobic005G008800 Sobic001G289600--Sobic005G008800 Sobic007G105100 Sobic007G105100 Sobic001G289600--Sobic007G105100 Sobic001G289600--Sobic010G010700
Octagon: transcription factors


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