Gene annotation
Transcriptome id Sobic.002G293000.3,Sobic.002G293000.2
Synonym AtIDD5, IDD5, Sb02g032400
Functional annotation IDD5 (PubMedID : 24676859)
ZOS9-17 - C2H2 zinc finger protein, expressed
UniProt C5X7R9
Pfam PF12171
Panther DB PTHR10593 PTHR10593:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55110 : indeterminate(ID)-domain 7
RAP-DB (Rice) LOC_Os09g38340.2,LOC_Os09g38340.1 : ZOS9-17 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a010195 , Zm00025a036023 , Zm00025a023015 , Zm00025a056789 , Zm00025a005649 , Zm00025a014537 , Zm00025a028450 , Zm00025a015003 , Zm00025a021475 , Zm00025a026121 , Zm00025a047929 , Zm00025a035820 , Zm00025a038400 , Zm00025a001203
Brachypodium KQK08378 , KQJ91417 , KQJ91416 , KQJ91415 , KQJ84076 , KQJ84077 , KQK15525 , KQK22673 , KQK03537 , KQK11405 , KQK23107 , KQK03154 , KQK00679
Barley HORVU4Hr1G070950.7 , HORVU4Hr1G070950.6 , HORVU4Hr1G070950.4 , HORVU4Hr1G070950.3 , HORVU4Hr1G070950.2 , HORVU4Hr1G070950.1 , HORVU4Hr1G070950.9 , HORVU4Hr1G070950.8 , HORVU3Hr1G049810.5 , HORVU3Hr1G049810.4 , HORVU3Hr1G049810.7 , HORVU3Hr1G049810.6 , HORVU3Hr1G049810.3 , HORVU3Hr1G049810.2 , HORVU4Hr1G070950.13 , HORVU4Hr1G070950.12 , HORVU4Hr1G070950.11 , HORVU4Hr1G070950.10
Wheat TraesCS3B02G237700 , TraesCS2B02G421100 , TraesCS4D02G232000 , TraesCS5D02G364900 , TraesCS5D02G364900 , TraesCS4B02G262400 , TraesCS3D02G107300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS3A02G205800 , TraesCS3B02G497200 , TraesCS3A02G105100 , TraesCS3B02G123600 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS3D02G171300 , TraesCS5A02G356100 , TraesCS6D02G116300 , TraesCS4A02G041400 , TraesCS6A02G126000 , TraesCS2A02G403200 , TraesCS2A02G403200 , TraesCS3D02G449900 , TraesCS3A02G170700 , TraesCS6A02G254500 , TraesCS6D02G235800 , TraesCS5B02G358600 , TraesCS6B02G154000 , TraesCS3B02G195900 , TraesCS6D02G235800 , TraesCS4D02G262500 , TraesCS3D02G209800
Populus -


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cDNA sequences
Sobic.002G293000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G418700 SLT1 protein, putative, expressed -
2 Sobic.003G442700 - -
3 Sobic.003G108600 heat shock protein DnaJ, putative, expressed -
4 Sobic.007G152600 cytochrome P450, putative, expressed -
5 Sobic.002G359600 GA22009-PA, putative, expressed -
6 Sobic.004G298900 OR, putative, expressed -
7 Sobic.010G186000 expressed protein -
8 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
9 Sobic.006G260800 phosphatidate cytidylyltransferase, putative, expressed K18678: phytol kinase
10 Sobic.006G271800 potasium efflux antiporter protein, putative, expressed -
11 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
12 Sobic.010G214000 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
13 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
14 Sobic.003G068800 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
15 Sobic.003G443500 cyclase/dehydrase family protein, expressed -
16 Sobic.004G151500 AP2 domain containing protein, expressed -
17 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
18 Sobic.003G014300 expressed protein -
19 Sobic.004G235600 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family


Gene co-expression network
sample Sobic002G293000 Sobic002G293000 Sobic001G418700 Sobic001G418700 Sobic002G293000--Sobic001G418700 Sobic003G442700 Sobic003G442700 Sobic002G293000--Sobic003G442700 Sobic003G108600 Sobic003G108600 Sobic002G293000--Sobic003G108600 Sobic007G152600 Sobic007G152600 Sobic002G293000--Sobic007G152600 Sobic002G359600 Sobic002G359600 Sobic002G293000--Sobic002G359600 Sobic004G298900 Sobic004G298900 Sobic002G293000--Sobic004G298900 Sobic010G186000 Sobic010G186000 Sobic002G293000--Sobic010G186000 Sobic001G043800 Sobic001G043800 Sobic002G293000--Sobic001G043800 Sobic006G260800 Sobic006G260800 Sobic002G293000--Sobic006G260800 Sobic001G433000 Sobic001G433000 Sobic001G418700--Sobic001G433000 Sobic007G136800 Sobic007G136800 Sobic001G418700--Sobic007G136800 Sobic001G065600 Sobic001G065600 Sobic001G418700--Sobic001G065600 Sobic003G003600 Sobic003G003600 Sobic001G418700--Sobic003G003600 Sobic004G174400 Sobic004G174400 Sobic001G418700--Sobic004G174400 Sobic001G418700--Sobic003G442700 Sobic001G073900 Sobic001G073900 Sobic001G418700--Sobic001G073900 Sobic003G343500 Sobic003G343500 Sobic001G418700--Sobic003G343500 Sobic003G396200 Sobic003G396200 Sobic001G418700--Sobic003G396200 Sobic001G465700 Sobic001G465700 Sobic003G442700--Sobic001G465700 Sobic004G235600 Sobic004G235600 Sobic003G442700--Sobic004G235600 Sobic008G001900 Sobic008G001900 Sobic003G442700--Sobic008G001900 Sobic003G332700 Sobic003G332700 Sobic003G442700--Sobic003G332700 Sobic009G121000 Sobic009G121000 Sobic003G442700--Sobic009G121000 Sobic002G042500 Sobic002G042500 Sobic003G442700--Sobic002G042500 Sobic001G060401 Sobic001G060401 Sobic003G442700--Sobic001G060401 Sobic004G001300 Sobic004G001300 Sobic003G442700--Sobic004G001300 Sobic003G442700--Sobic001G073900 Sobic010G214000 Sobic010G214000 Sobic003G108600--Sobic010G214000 Sobic009G189000 Sobic009G189000 Sobic003G108600--Sobic009G189000 Sobic003G068800 Sobic003G068800 Sobic003G108600--Sobic003G068800 Sobic001G102300 Sobic001G102300 Sobic003G108600--Sobic001G102300 Sobic010G225600 Sobic010G225600 Sobic003G108600--Sobic010G225600 Sobic006G258700 Sobic006G258700 Sobic003G108600--Sobic006G258700 Sobic006G135100 Sobic006G135100 Sobic003G108600--Sobic006G135100 Sobic004G113800 Sobic004G113800 Sobic003G108600--Sobic004G113800 Sobic003G108600--Sobic001G418700 Sobic003G305000 Sobic003G305000 Sobic007G152600--Sobic003G305000 Sobic007G152600--Sobic001G065600 Sobic003G110700 Sobic003G110700 Sobic007G152600--Sobic003G110700 Sobic003G443500 Sobic003G443500 Sobic007G152600--Sobic003G443500 Sobic007G152600--Sobic004G001300 Sobic007G152600--Sobic002G293000 Sobic006G101500 Sobic006G101500 Sobic007G152600--Sobic006G101500 Sobic005G188600 Sobic005G188600 Sobic007G152600--Sobic005G188600 Sobic002G036000 Sobic002G036000 Sobic007G152600--Sobic002G036000 Sobic002G359600--Sobic003G442700 Sobic002G359600--Sobic003G068800 Sobic002G359600--Sobic009G121000 Sobic008G062500 Sobic008G062500 Sobic002G359600--Sobic008G062500 Sobic002G347600 Sobic002G347600 Sobic002G359600--Sobic002G347600 Sobic002G359600--Sobic006G101500 Sobic002G359600--Sobic006G260800 Sobic001G098301 Sobic001G098301 Sobic002G359600--Sobic001G098301 Sobic010G214100 Sobic010G214100 Sobic002G359600--Sobic010G214100 Sobic003G037300 Sobic003G037300 Sobic004G298900--Sobic003G037300 Sobic009G062400 Sobic009G062400 Sobic004G298900--Sobic009G062400 Sobic004G298900--Sobic006G258700 Sobic008G006100 Sobic008G006100 Sobic004G298900--Sobic008G006100 Sobic003G014300 Sobic003G014300 Sobic004G298900--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic004G298900--Sobic002G102200 Sobic005G111550 Sobic005G111550 Sobic004G298900--Sobic005G111550 Sobic004G151500 Sobic004G151500 Sobic004G298900--Sobic004G151500 Sobic004G298900--Sobic006G260800 Sobic008G070800 Sobic008G070800 Sobic010G186000--Sobic008G070800 Sobic004G086700 Sobic004G086700 Sobic010G186000--Sobic004G086700 Sobic002G091600 Sobic002G091600 Sobic010G186000--Sobic002G091600 Sobic010G186000--Sobic007G136800 Sobic002G383800 Sobic002G383800 Sobic010G186000--Sobic002G383800 Sobic009G084500 Sobic009G084500 Sobic010G186000--Sobic009G084500 Sobic004G040900 Sobic004G040900 Sobic010G186000--Sobic004G040900 Sobic002G131200 Sobic002G131200 Sobic010G186000--Sobic002G131200 Sobic003G110800 Sobic003G110800 Sobic010G186000--Sobic003G110800 Sobic001G043800--Sobic007G136800 Sobic006G130800 Sobic006G130800 Sobic001G043800--Sobic006G130800 Sobic001G043800--Sobic004G086700 Sobic002G218500 Sobic002G218500 Sobic001G043800--Sobic002G218500 Sobic001G102500 Sobic001G102500 Sobic001G043800--Sobic001G102500 Sobic006G031800 Sobic006G031800 Sobic001G043800--Sobic006G031800 Sobic007G029700 Sobic007G029700 Sobic001G043800--Sobic007G029700 Sobic001G053000 Sobic001G053000 Sobic001G043800--Sobic001G053000 Sobic002G431300 Sobic002G431300 Sobic001G043800--Sobic002G431300 Sobic006G260800--Sobic004G298900 Sobic006G260800--Sobic010G214100 Sobic002G112400 Sobic002G112400 Sobic006G260800--Sobic002G112400 Sobic006G260800--Sobic005G111550 Sobic003G160800 Sobic003G160800 Sobic006G260800--Sobic003G160800 Sobic006G260800--Sobic009G062400 Sobic005G001700 Sobic005G001700 Sobic006G260800--Sobic005G001700 Sobic004G211600 Sobic004G211600 Sobic006G260800--Sobic004G211600 Sobic009G140000 Sobic009G140000 Sobic006G260800--Sobic009G140000
Octagon: transcription factors


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