Gene annotation
Transcriptome id Sobic.003G097900.1,Sobic.003G097900.2
Synonym Sb03g008190
Functional annotation seven in absentia protein family domain containing protein, expressed
UniProt A0A1B6Q2K1
Pfam -
Panther DB PTHR10315 PTHR10315:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G37870 : Protein with RING/U-box and TRAF-like domains
RAP-DB (Rice) LOC_Os01g03290.1 : seven in absentia protein family domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G028600 expressed protein -
2 Sobic.006G273100 - -
3 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.008G061500 receptor kinase, putative, expressed -
5 Sobic.004G112500 - -
6 Sobic.007G132600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
7 Sobic.003G057800 rho termination factor, N-terminal domain containing protein, expressed -
8 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
9 Sobic.010G248200 KID-containing protein, putative, expressed -
10 Sobic.005G130450 - -
11 Sobic.004G164600 - -
12 Sobic.004G212800 - -
13 Sobic.005G117901 - -
14 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
15 Sobic.001G515600 expressed protein -
16 Sobic.001G243901 - -
17 Sobic.001G272000 - -
18 Sobic.003G167632 - -
19 Sobic.004G096200 - -
20 Sobic.001G345333 - -


Gene co-expression network
sample Sobic003G097900 Sobic003G097900 Sobic001G028600 Sobic001G028600 Sobic003G097900--Sobic001G028600 Sobic006G273100 Sobic006G273100 Sobic003G097900--Sobic006G273100 Sobic002G285200 Sobic002G285200 Sobic003G097900--Sobic002G285200 Sobic008G061500 Sobic008G061500 Sobic003G097900--Sobic008G061500 Sobic004G112500 Sobic004G112500 Sobic003G097900--Sobic004G112500 Sobic007G132600 Sobic007G132600 Sobic003G097900--Sobic007G132600 Sobic003G057800 Sobic003G057800 Sobic003G097900--Sobic003G057800 Sobic001G024200 Sobic001G024200 Sobic003G097900--Sobic001G024200 Sobic010G248200 Sobic010G248200 Sobic003G097900--Sobic010G248200 Sobic002G007250 Sobic002G007250 Sobic001G028600--Sobic002G007250 Sobic004G212800 Sobic004G212800 Sobic001G028600--Sobic004G212800 Sobic002G108800 Sobic002G108800 Sobic001G028600--Sobic002G108800 Sobic001G028600--Sobic002G285200 Sobic001G345333 Sobic001G345333 Sobic001G028600--Sobic001G345333 Sobic007G156500 Sobic007G156500 Sobic001G028600--Sobic007G156500 Sobic001G028600--Sobic010G248200 Sobic002G253500 Sobic002G253500 Sobic001G028600--Sobic002G253500 Sobic008G161401 Sobic008G161401 Sobic001G028600--Sobic008G161401 Sobic009G113600 Sobic009G113600 Sobic006G273100--Sobic009G113600 Sobic002G051400 Sobic002G051400 Sobic006G273100--Sobic002G051400 Sobic009G109450 Sobic009G109450 Sobic006G273100--Sobic009G109450 Sobic009G110366 Sobic009G110366 Sobic006G273100--Sobic009G110366 Sobic009G196700 Sobic009G196700 Sobic006G273100--Sobic009G196700 Sobic005G121800 Sobic005G121800 Sobic006G273100--Sobic005G121800 Sobic008G079100 Sobic008G079100 Sobic006G273100--Sobic008G079100 Sobic006G132200 Sobic006G132200 Sobic006G273100--Sobic006G132200 Sobic008G108900 Sobic008G108900 Sobic006G273100--Sobic008G108900 Sobic004G076732 Sobic004G076732 Sobic002G285200--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic002G285200--Sobic002G410200 Sobic007G115000 Sobic007G115000 Sobic002G285200--Sobic007G115000 Sobic002G285200--Sobic004G212800 SobicK009900 SobicK009900 Sobic002G285200--SobicK009900 Sobic001G253100 Sobic001G253100 Sobic002G285200--Sobic001G253100 Sobic004G164600 Sobic004G164600 Sobic002G285200--Sobic004G164600 Sobic007G073400 Sobic007G073400 Sobic002G285200--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic002G285200--Sobic003G424100 Sobic008G061500--Sobic010G248200 Sobic008G061500--Sobic002G007250 Sobic008G061500--Sobic001G345333 Sobic001G128800 Sobic001G128800 Sobic008G061500--Sobic001G128800 Sobic008G042250 Sobic008G042250 Sobic008G061500--Sobic008G042250 Sobic008G157950 Sobic008G157950 Sobic008G061500--Sobic008G157950 Sobic005G130200 Sobic005G130200 Sobic008G061500--Sobic005G130200 Sobic008G061500--Sobic004G212800 Sobic001G287301 Sobic001G287301 Sobic008G061500--Sobic001G287301 Sobic004G112500--Sobic001G024200 Sobic004G112500--Sobic004G212800 Sobic007G211000 Sobic007G211000 Sobic004G112500--Sobic007G211000 Sobic001G543900 Sobic001G543900 Sobic004G112500--Sobic001G543900 Sobic004G112500--Sobic004G164600 Sobic004G112500--Sobic010G248200 Sobic010G124001 Sobic010G124001 Sobic004G112500--Sobic010G124001 Sobic004G112500--Sobic008G157950 Sobic004G112500--Sobic008G042250 Sobic007G132600--Sobic008G079100 Sobic007G132600--Sobic001G287301 Sobic005G139800 Sobic005G139800 Sobic007G132600--Sobic005G139800 Sobic007G132600--Sobic002G007250 Sobic009G209800 Sobic009G209800 Sobic007G132600--Sobic009G209800 Sobic007G132600--Sobic002G410200 Sobic007G132600--Sobic008G042250 Sobic007G132600--Sobic004G076732 Sobic008G049701 Sobic008G049701 Sobic007G132600--Sobic008G049701 Sobic001G479500 Sobic001G479500 Sobic003G057800--Sobic001G479500 Sobic003G357500 Sobic003G357500 Sobic003G057800--Sobic003G357500 Sobic003G057800--Sobic010G248200 Sobic003G057800--Sobic008G161401 Sobic003G057800--Sobic004G212800 Sobic003G057800--Sobic005G130200 Sobic003G057800--Sobic007G073400 Sobic004G016500 Sobic004G016500 Sobic003G057800--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G057800--Sobic001G046600 Sobic001G024200--Sobic004G212800 Sobic001G024200--Sobic007G211000 Sobic001G024200--Sobic004G112500 Sobic003G204000 Sobic003G204000 Sobic001G024200--Sobic003G204000 Sobic001G272000 Sobic001G272000 Sobic001G024200--Sobic001G272000 Sobic001G024200--Sobic004G164600 Sobic001G024200--SobicK009900 Sobic001G439500 Sobic001G439500 Sobic001G024200--Sobic001G439500 Sobic001G024200--Sobic010G248200 Sobic010G248200--Sobic002G007250 Sobic010G248200--Sobic001G345333 Sobic010G248200--Sobic004G212800 Sobic010G248200--Sobic005G130200 Sobic010G248200--Sobic002G253500 Sobic010G248200--Sobic008G161401 Sobic010G248200--Sobic002G108800 Sobic001G243901 Sobic001G243901 Sobic010G248200--Sobic001G243901 Sobic010G218500 Sobic010G218500 Sobic010G248200--Sobic010G218500
Octagon: transcription factors


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