Gene annotation
Transcriptome id Sobic.003G170333.1
Synonym -
Functional annotation -
UniProt A0A1W0VXN2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G222050 - -
2 Sobic.001G134150 - -
3 Sobic.009G196900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA"(PubMedID : 20499123)@down-regulated TF in developmental senescence(PubMedID : 27586543)@auxin response factor 14, putative, expressed K14486: K14486, auxin response factor
4 Sobic.010G102700 alpha/beta hydrolase fold, putative, expressed -
5 Sobic.010G008433 - -
6 Sobic.007G049700 - -
7 Sobic.001G142700 - -
8 Sobic.009G118200 MSP domain containing protein, putative, expressed -
9 Sobic.001G454850 - -
10 Sobic.001G489550 - -
11 Sobic.010G238000 - -
12 Sobic.001G217850 - -
13 Sobic.010G246066 - -
14 Sobic.007G149550 - -
15 Sobic.010G241400 expressed protein -
16 Sobic.001G245650 - -
17 Sobic.001G134900 exostosin, putative, expressed -
18 Sobic.001G195400 - -
19 Sobic.002G268600 PCF-like (ClassI) Subclade 7 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
20 Sobic.007G207100 chloroplast 30S ribosomal protein S3, putative, expressed K02982: RP-S3, small subunit ribosomal protein S3


Gene co-expression network
sample Sobic003G170333 Sobic003G170333 Sobic010G222050 Sobic010G222050 Sobic003G170333--Sobic010G222050 Sobic001G134150 Sobic001G134150 Sobic003G170333--Sobic001G134150 Sobic009G196900 Sobic009G196900 Sobic003G170333--Sobic009G196900 Sobic010G102700 Sobic010G102700 Sobic003G170333--Sobic010G102700 Sobic010G008433 Sobic010G008433 Sobic003G170333--Sobic010G008433 Sobic007G049700 Sobic007G049700 Sobic003G170333--Sobic007G049700 Sobic001G142700 Sobic001G142700 Sobic003G170333--Sobic001G142700 Sobic009G118200 Sobic009G118200 Sobic003G170333--Sobic009G118200 Sobic001G454850 Sobic001G454850 Sobic003G170333--Sobic001G454850 Sobic010G222050--Sobic001G134150 Sobic009G095400 Sobic009G095400 Sobic010G222050--Sobic009G095400 Sobic001G134900 Sobic001G134900 Sobic010G222050--Sobic001G134900 Sobic010G241400 Sobic010G241400 Sobic010G222050--Sobic010G241400 Sobic010G222050--Sobic010G008433 Sobic001G489550 Sobic001G489550 Sobic010G222050--Sobic001G489550 Sobic001G330775 Sobic001G330775 Sobic010G222050--Sobic001G330775 Sobic001G217850 Sobic001G217850 Sobic010G222050--Sobic001G217850 Sobic010G222050--Sobic003G170333 Sobic002G268600 Sobic002G268600 Sobic001G134150--Sobic002G268600 Sobic001G134150--Sobic001G489550 Sobic001G134150--Sobic010G241400 Sobic007G126150 Sobic007G126150 Sobic001G134150--Sobic007G126150 Sobic007G207100 Sobic007G207100 Sobic001G134150--Sobic007G207100 Sobic004G320900 Sobic004G320900 Sobic001G134150--Sobic004G320900 Sobic001G134150--Sobic010G008433 Sobic001G134150--Sobic010G222050 Sobic006G192900 Sobic006G192900 Sobic001G134150--Sobic006G192900 Sobic001G011100 Sobic001G011100 Sobic009G196900--Sobic001G011100 Sobic008G183000 Sobic008G183000 Sobic009G196900--Sobic008G183000 Sobic006G063800 Sobic006G063800 Sobic009G196900--Sobic006G063800 Sobic009G120850 Sobic009G120850 Sobic009G196900--Sobic009G120850 Sobic006G260700 Sobic006G260700 Sobic009G196900--Sobic006G260700 Sobic008G174400 Sobic008G174400 Sobic009G196900--Sobic008G174400 Sobic002G079200 Sobic002G079200 Sobic009G196900--Sobic002G079200 Sobic003G383200 Sobic003G383200 Sobic009G196900--Sobic003G383200 Sobic002G373500 Sobic002G373500 Sobic009G196900--Sobic002G373500 Sobic010G102700--Sobic001G489550 Sobic010G102700--Sobic010G008433 Sobic002G423901 Sobic002G423901 Sobic010G102700--Sobic002G423901 Sobic001G472050 Sobic001G472050 Sobic010G102700--Sobic001G472050 Sobic005G093901 Sobic005G093901 Sobic010G102700--Sobic005G093901 Sobic010G102700--Sobic004G320900 Sobic003G117850 Sobic003G117850 Sobic010G102700--Sobic003G117850 Sobic002G288700 Sobic002G288700 Sobic010G102700--Sobic002G288700 Sobic010G238000 Sobic010G238000 Sobic010G102700--Sobic010G238000 Sobic010G008433--Sobic001G489550 Sobic007G223250 Sobic007G223250 Sobic010G008433--Sobic007G223250 Sobic010G008433--Sobic002G288700 Sobic010G008433--Sobic002G423901 Sobic002G148166 Sobic002G148166 Sobic010G008433--Sobic002G148166 Sobic004G087000 Sobic004G087000 Sobic010G008433--Sobic004G087000 Sobic010G008433--Sobic001G472050 Sobic002G222000 Sobic002G222000 Sobic010G008433--Sobic002G222000 Sobic007G109200 Sobic007G109200 Sobic010G008433--Sobic007G109200 Sobic007G049700--Sobic010G241400 Sobic007G049700--Sobic001G134150 Sobic007G049700--Sobic001G217850 Sobic007G049700--Sobic002G268600 Sobic004G181400 Sobic004G181400 Sobic007G049700--Sobic004G181400 Sobic007G049700--Sobic010G238000 Sobic004G176950 Sobic004G176950 Sobic007G049700--Sobic004G176950 Sobic007G049700--Sobic006G192900 Sobic007G049700--Sobic010G102700 Sobic001G059150 Sobic001G059150 Sobic001G142700--Sobic001G059150 Sobic001G142700--Sobic001G489550 Sobic001G195400 Sobic001G195400 Sobic001G142700--Sobic001G195400 Sobic001G142700--Sobic010G238000 Sobic001G142700--Sobic010G008433 Sobic001G142700--Sobic004G320900 Sobic001G142700--Sobic002G288700 Sobic001G490200 Sobic001G490200 Sobic001G142700--Sobic001G490200 Sobic001G142700--Sobic010G102700 Sobic009G118200--Sobic007G207100 Sobic006G102200 Sobic006G102200 Sobic009G118200--Sobic006G102200 Sobic009G118200--Sobic003G117850 Sobic004G116900 Sobic004G116900 Sobic009G118200--Sobic004G116900 Sobic003G053100 Sobic003G053100 Sobic009G118200--Sobic003G053100 Sobic007G199901 Sobic007G199901 Sobic009G118200--Sobic007G199901 Sobic009G118200--Sobic001G134150 Sobic003G172600 Sobic003G172600 Sobic009G118200--Sobic003G172600 Sobic002G150200 Sobic002G150200 Sobic009G118200--Sobic002G150200 Sobic001G454850--Sobic001G217850 Sobic003G357900 Sobic003G357900 Sobic001G454850--Sobic003G357900 Sobic004G176550 Sobic004G176550 Sobic001G454850--Sobic004G176550 Sobic007G132300 Sobic007G132300 Sobic001G454850--Sobic007G132300 Sobic001G454850--Sobic010G241400 Sobic005G216833 Sobic005G216833 Sobic001G454850--Sobic005G216833 Sobic001G334800 Sobic001G334800 Sobic001G454850--Sobic001G334800 Sobic001G454850--Sobic006G192900 Sobic005G165300 Sobic005G165300 Sobic001G454850--Sobic005G165300
Octagon: transcription factors


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