Gene annotation
Transcriptome id Sobic.007G049700.1
Synonym
Functional annotation -
UniProt A0A1B6PFM8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G241400 expressed protein -
2 Sobic.001G134150 - -
3 Sobic.001G217850 - -
4 Sobic.002G268600 PCF-like (ClassI) Subclade 7 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
5 Sobic.004G181400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed K16286: E3 ubiquitin-protein ligase EL5
6 Sobic.010G238000 - -
7 Sobic.004G176950 - -
8 Sobic.006G192900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
9 Sobic.010G102700 alpha/beta hydrolase fold, putative, expressed -
10 Sobic.001G489550 - -
11 Sobic.009G170050 - -
12 Sobic.004G269300 - -
13 Sobic.005G168900 expressed protein -
14 Sobic.010G008433 - -
15 Sobic.007G126150 - -
16 Sobic.010G246066 - -
17 Sobic.010G222050 - -
18 Sobic.001G454850 - -
19 Sobic.004G176550 - -
20 Sobic.003G034350 - -


Gene co-expression network
sample Sobic007G049700 Sobic007G049700 Sobic010G241400 Sobic010G241400 Sobic007G049700--Sobic010G241400 Sobic001G134150 Sobic001G134150 Sobic007G049700--Sobic001G134150 Sobic001G217850 Sobic001G217850 Sobic007G049700--Sobic001G217850 Sobic002G268600 Sobic002G268600 Sobic007G049700--Sobic002G268600 Sobic004G181400 Sobic004G181400 Sobic007G049700--Sobic004G181400 Sobic010G238000 Sobic010G238000 Sobic007G049700--Sobic010G238000 Sobic004G176950 Sobic004G176950 Sobic007G049700--Sobic004G176950 Sobic006G192900 Sobic006G192900 Sobic007G049700--Sobic006G192900 Sobic010G102700 Sobic010G102700 Sobic007G049700--Sobic010G102700 Sobic010G241400--Sobic006G192900 Sobic006G009200 Sobic006G009200 Sobic010G241400--Sobic006G009200 Sobic002G062400 Sobic002G062400 Sobic010G241400--Sobic002G062400 Sobic005G168900 Sobic005G168900 Sobic010G241400--Sobic005G168900 Sobic010G241400--Sobic001G217850 Sobic004G176550 Sobic004G176550 Sobic010G241400--Sobic004G176550 Sobic009G035000 Sobic009G035000 Sobic010G241400--Sobic009G035000 Sobic009G170050 Sobic009G170050 Sobic010G241400--Sobic009G170050 Sobic010G241400--Sobic001G134150 Sobic001G134150--Sobic002G268600 Sobic001G489550 Sobic001G489550 Sobic001G134150--Sobic001G489550 Sobic001G134150--Sobic010G241400 Sobic007G126150 Sobic007G126150 Sobic001G134150--Sobic007G126150 Sobic007G207100 Sobic007G207100 Sobic001G134150--Sobic007G207100 Sobic004G320900 Sobic004G320900 Sobic001G134150--Sobic004G320900 Sobic010G008433 Sobic010G008433 Sobic001G134150--Sobic010G008433 Sobic010G222050 Sobic010G222050 Sobic001G134150--Sobic010G222050 Sobic001G134150--Sobic006G192900 Sobic001G217850--Sobic005G168900 Sobic001G217850--Sobic009G170050 Sobic001G217850--Sobic010G241400 Sobic001G217850--Sobic004G176550 Sobic003G357900 Sobic003G357900 Sobic001G217850--Sobic003G357900 Sobic001G217850--Sobic006G192900 Sobic006G174050 Sobic006G174050 Sobic001G217850--Sobic006G174050 Sobic001G217850--Sobic002G062400 Sobic001G217850--Sobic006G009200 Sobic002G268600--Sobic001G134150 Sobic005G218300 Sobic005G218300 Sobic002G268600--Sobic005G218300 Sobic002G268600--Sobic006G192900 Sobic002G268600--Sobic010G241400 Sobic010G054700 Sobic010G054700 Sobic002G268600--Sobic010G054700 Sobic003G018150 Sobic003G018150 Sobic002G268600--Sobic003G018150 Sobic009G136950 Sobic009G136950 Sobic002G268600--Sobic009G136950 Sobic004G163350 Sobic004G163350 Sobic002G268600--Sobic004G163350 Sobic001G213832 Sobic001G213832 Sobic002G268600--Sobic001G213832 Sobic010G002600 Sobic010G002600 Sobic004G181400--Sobic010G002600 Sobic004G181400--Sobic006G192900 Sobic008G041500 Sobic008G041500 Sobic004G181400--Sobic008G041500 Sobic002G319900 Sobic002G319900 Sobic004G181400--Sobic002G319900 Sobic004G181400--Sobic009G035000 Sobic003G267150 Sobic003G267150 Sobic004G181400--Sobic003G267150 Sobic004G149150 Sobic004G149150 Sobic004G181400--Sobic004G149150 Sobic008G108100 Sobic008G108100 Sobic004G181400--Sobic008G108100 Sobic004G173300 Sobic004G173300 Sobic004G181400--Sobic004G173300 Sobic001G472050 Sobic001G472050 Sobic010G238000--Sobic001G472050 Sobic010G238000--Sobic001G489550 Sobic004G269300 Sobic004G269300 Sobic010G238000--Sobic004G269300 Sobic002G423901 Sobic002G423901 Sobic010G238000--Sobic002G423901 Sobic002G245700 Sobic002G245700 Sobic010G238000--Sobic002G245700 Sobic010G238000--Sobic010G102700 Sobic004G169401 Sobic004G169401 Sobic010G238000--Sobic004G169401 Sobic010G238000--Sobic010G008433 Sobic007G199901 Sobic007G199901 Sobic010G238000--Sobic007G199901 Sobic004G176950--Sobic002G245700 Sobic002G413100 Sobic002G413100 Sobic004G176950--Sobic002G413100 Sobic001G148000 Sobic001G148000 Sobic004G176950--Sobic001G148000 Sobic010G268500 Sobic010G268500 Sobic004G176950--Sobic010G268500 Sobic003G053100 Sobic003G053100 Sobic004G176950--Sobic003G053100 Sobic001G413300 Sobic001G413300 Sobic004G176950--Sobic001G413300 Sobic003G208200 Sobic003G208200 Sobic004G176950--Sobic003G208200 Sobic004G176950--Sobic007G199901 Sobic003G117850 Sobic003G117850 Sobic004G176950--Sobic003G117850 Sobic006G192900--Sobic010G241400 Sobic006G192900--Sobic010G002600 Sobic002G307500 Sobic002G307500 Sobic006G192900--Sobic002G307500 Sobic006G192900--Sobic009G035000 Sobic006G192900--Sobic006G009200 Sobic006G192900--Sobic008G041500 Sobic006G192900--Sobic004G181400 Sobic004G093800 Sobic004G093800 Sobic006G192900--Sobic004G093800 Sobic006G192900--Sobic002G062400 Sobic010G102700--Sobic001G489550 Sobic010G102700--Sobic010G008433 Sobic010G102700--Sobic002G423901 Sobic010G102700--Sobic001G472050 Sobic005G093901 Sobic005G093901 Sobic010G102700--Sobic005G093901 Sobic010G102700--Sobic004G320900 Sobic010G102700--Sobic003G117850 Sobic002G288700 Sobic002G288700 Sobic010G102700--Sobic002G288700 Sobic010G102700--Sobic010G238000
Octagon: transcription factors


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