Gene annotation
Transcriptome id Sobic.003G181201.1
Synonym -
Functional annotation -
UniProt -
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G056800 - -
2 Sobic.005G060600 - -
3 Sobic.010G217532 - -
4 Sobic.001G284475 - -
5 Sobic.009G097300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
6 Sobic.003G252400 drought induced 19 protein, putative, expressed -
7 Sobic.003G251400 lectin-like receptor kinase 1, putative, expressed -
8 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
9 Sobic.001G086500 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS14 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
10 Sobic.003G397500 expressed protein -
11 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
12 Sobic.008G075600 - -
13 Sobic.004G211301 - -
14 Sobic.008G031300 nucleotidyltransferase, putative, expressed -
15 Sobic.003G137900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.003G272400 DUF292 domain containing protein, expressed -
17 Sobic.002G331450 - -
18 Sobic.006G258800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
19 Sobic.004G200800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@enzyme relate to secondary metabolic pathway(PubMedID : 25346182)@The B-phenyl ring of naringenin can be hydroxylated at the 3' positions to produce eriodictyol(PubMedID : 16943219)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
20 Sobic.005G182000 - -


Gene co-expression network
sample Sobic003G181201 Sobic003G181201 Sobic006G056800 Sobic006G056800 Sobic003G181201--Sobic006G056800 Sobic005G060600 Sobic005G060600 Sobic003G181201--Sobic005G060600 Sobic010G217532 Sobic010G217532 Sobic003G181201--Sobic010G217532 Sobic001G284475 Sobic001G284475 Sobic003G181201--Sobic001G284475 Sobic009G097300 Sobic009G097300 Sobic003G181201--Sobic009G097300 Sobic003G252400 Sobic003G252400 Sobic003G181201--Sobic003G252400 Sobic003G251400 Sobic003G251400 Sobic003G181201--Sobic003G251400 Sobic003G281900 Sobic003G281900 Sobic003G181201--Sobic003G281900 Sobic001G086500 Sobic001G086500 Sobic003G181201--Sobic001G086500 Sobic006G056800--Sobic001G284475 Sobic006G056800--Sobic005G060600 Sobic006G056800--Sobic003G181201 Sobic006G056800--Sobic003G252400 Sobic003G164950 Sobic003G164950 Sobic006G056800--Sobic003G164950 Sobic006G056800--Sobic003G251400 Sobic006G056800--Sobic001G086500 Sobic004G211301 Sobic004G211301 Sobic006G056800--Sobic004G211301 Sobic003G397500 Sobic003G397500 Sobic006G056800--Sobic003G397500 Sobic005G060600--Sobic004G211301 Sobic005G060600--Sobic003G252400 Sobic005G060600--Sobic006G056800 Sobic002G331450 Sobic002G331450 Sobic005G060600--Sobic002G331450 Sobic005G060600--Sobic003G397500 Sobic001G112000 Sobic001G112000 Sobic005G060600--Sobic001G112000 Sobic002G325600 Sobic002G325600 Sobic005G060600--Sobic002G325600 Sobic008G031300 Sobic008G031300 Sobic005G060600--Sobic008G031300 Sobic010G085400 Sobic010G085400 Sobic005G060600--Sobic010G085400 Sobic010G026500 Sobic010G026500 Sobic010G217532--Sobic010G026500 Sobic010G217532--Sobic003G181201 Sobic010G217532--Sobic001G284475 Sobic001G082900 Sobic001G082900 Sobic010G217532--Sobic001G082900 Sobic008G059000 Sobic008G059000 Sobic010G217532--Sobic008G059000 Sobic009G231200 Sobic009G231200 Sobic010G217532--Sobic009G231200 Sobic007G124200 Sobic007G124200 Sobic010G217532--Sobic007G124200 Sobic010G217532--Sobic003G251400 Sobic008G075600 Sobic008G075600 Sobic010G217532--Sobic008G075600 Sobic001G284475--Sobic006G056800 Sobic006G038951 Sobic006G038951 Sobic001G284475--Sobic006G038951 Sobic001G284475--Sobic003G251400 Sobic001G284475--Sobic003G181201 Sobic001G284475--Sobic003G252400 Sobic001G284475--Sobic010G217532 Sobic001G284475--Sobic005G060600 Sobic007G213100 Sobic007G213100 Sobic001G284475--Sobic007G213100 Sobic001G284475--Sobic003G164950 Sobic003G137900 Sobic003G137900 Sobic009G097300--Sobic003G137900 Sobic005G215766 Sobic005G215766 Sobic009G097300--Sobic005G215766 Sobic003G397400 Sobic003G397400 Sobic009G097300--Sobic003G397400 Sobic006G272700 Sobic006G272700 Sobic009G097300--Sobic006G272700 Sobic009G097300--Sobic003G281900 Sobic003G064300 Sobic003G064300 Sobic009G097300--Sobic003G064300 Sobic009G076700 Sobic009G076700 Sobic009G097300--Sobic009G076700 Sobic007G073750 Sobic007G073750 Sobic009G097300--Sobic007G073750 Sobic007G143200 Sobic007G143200 Sobic009G097300--Sobic007G143200 Sobic003G252400--Sobic002G331450 Sobic003G252400--Sobic004G211301 Sobic003G252400--Sobic003G397500 Sobic002G110200 Sobic002G110200 Sobic003G252400--Sobic002G110200 Sobic003G252400--Sobic010G085400 Sobic003G252400--Sobic005G060600 Sobic002G013900 Sobic002G013900 Sobic003G252400--Sobic002G013900 Sobic003G252400--Sobic002G325600 Sobic007G131700 Sobic007G131700 Sobic003G252400--Sobic007G131700 Sobic005G016900 Sobic005G016900 Sobic003G251400--Sobic005G016900 Sobic003G251400--Sobic003G252400 Sobic003G251400--Sobic001G284475 Sobic003G251400--Sobic005G060600 Sobic007G169600 Sobic007G169600 Sobic003G251400--Sobic007G169600 Sobic003G251400--Sobic002G325600 Sobic003G251400--Sobic004G211301 Sobic003G251400--Sobic002G331450 Sobic003G251400--Sobic003G397400 Sobic003G272400 Sobic003G272400 Sobic003G281900--Sobic003G272400 Sobic003G281900--Sobic009G097300 Sobic002G306000 Sobic002G306000 Sobic003G281900--Sobic002G306000 Sobic003G126300 Sobic003G126300 Sobic003G281900--Sobic003G126300 Sobic004G353600 Sobic004G353600 Sobic003G281900--Sobic004G353600 Sobic003G281900--Sobic003G397500 Sobic009G213000 Sobic009G213000 Sobic003G281900--Sobic009G213000 Sobic009G079300 Sobic009G079300 Sobic003G281900--Sobic009G079300 Sobic007G047700 Sobic007G047700 Sobic003G281900--Sobic007G047700 Sobic001G086500--Sobic002G325600 Sobic001G086500--Sobic008G075600 Sobic001G086500--Sobic002G331450 Sobic001G086500--Sobic005G060600 Sobic001G086500--Sobic010G085400 Sobic007G153001 Sobic007G153001 Sobic001G086500--Sobic007G153001 Sobic001G086500--Sobic003G252400 Sobic001G086500--Sobic005G016900 Sobic001G086500--Sobic007G169600
Octagon: transcription factors


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