Gene annotation
Transcriptome id Sobic.006G056800.1
Synonym
Functional annotation -
UniProt A0A1B6PKF0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06580 : FAD-linked oxidases family protein
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a016130
Brachypodium KQK20806
Barley HORVU2Hr1G079300.3 , HORVU2Hr1G079300.2 , HORVU2Hr1G079300.1 , HORVU2Hr1G079300.6 , HORVU2Hr1G079300.5 , HORVU2Hr1G079300.4
Wheat TraesCS2A02G247000 , TraesCS6D02G336600 , TraesCS2D02G249400 , TraesCS2D02G249400 , TraesCS2D02G249400 , TraesCS2B02G263200 , TraesCS6A02G354300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G284475 - -
2 Sobic.005G060600 - -
3 Sobic.003G181201 - -
4 Sobic.003G252400 drought induced 19 protein, putative, expressed -
5 Sobic.003G164950 - -
6 Sobic.003G251400 lectin-like receptor kinase 1, putative, expressed -
7 Sobic.001G086500 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS14 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
8 Sobic.004G211301 - -
9 Sobic.003G397500 expressed protein -
10 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
11 Sobic.007G085001 - K02937: RP-L7e, large subunit ribosomal protein L7e
12 Sobic.002G229600 - -
13 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
14 Sobic.010G217532 - -
15 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
16 Sobic.005G087900 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
17 Sobic.009G097300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.008G031300 nucleotidyltransferase, putative, expressed -
19 Sobic.006G115300 amino acid transporter, putative, expressed -
20 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -


Gene co-expression network
sample Sobic006G056800 Sobic006G056800 Sobic001G284475 Sobic001G284475 Sobic006G056800--Sobic001G284475 Sobic005G060600 Sobic005G060600 Sobic006G056800--Sobic005G060600 Sobic003G181201 Sobic003G181201 Sobic006G056800--Sobic003G181201 Sobic003G252400 Sobic003G252400 Sobic006G056800--Sobic003G252400 Sobic003G164950 Sobic003G164950 Sobic006G056800--Sobic003G164950 Sobic003G251400 Sobic003G251400 Sobic006G056800--Sobic003G251400 Sobic001G086500 Sobic001G086500 Sobic006G056800--Sobic001G086500 Sobic004G211301 Sobic004G211301 Sobic006G056800--Sobic004G211301 Sobic003G397500 Sobic003G397500 Sobic006G056800--Sobic003G397500 Sobic001G284475--Sobic006G056800 Sobic006G038951 Sobic006G038951 Sobic001G284475--Sobic006G038951 Sobic001G284475--Sobic003G251400 Sobic001G284475--Sobic003G181201 Sobic001G284475--Sobic003G252400 Sobic010G217532 Sobic010G217532 Sobic001G284475--Sobic010G217532 Sobic001G284475--Sobic005G060600 Sobic007G213100 Sobic007G213100 Sobic001G284475--Sobic007G213100 Sobic001G284475--Sobic003G164950 Sobic005G060600--Sobic004G211301 Sobic005G060600--Sobic003G252400 Sobic005G060600--Sobic006G056800 Sobic002G331450 Sobic002G331450 Sobic005G060600--Sobic002G331450 Sobic005G060600--Sobic003G397500 Sobic001G112000 Sobic001G112000 Sobic005G060600--Sobic001G112000 Sobic002G325600 Sobic002G325600 Sobic005G060600--Sobic002G325600 Sobic008G031300 Sobic008G031300 Sobic005G060600--Sobic008G031300 Sobic010G085400 Sobic010G085400 Sobic005G060600--Sobic010G085400 Sobic003G181201--Sobic006G056800 Sobic003G181201--Sobic005G060600 Sobic003G181201--Sobic010G217532 Sobic003G181201--Sobic001G284475 Sobic009G097300 Sobic009G097300 Sobic003G181201--Sobic009G097300 Sobic003G181201--Sobic003G252400 Sobic003G181201--Sobic003G251400 Sobic003G281900 Sobic003G281900 Sobic003G181201--Sobic003G281900 Sobic003G181201--Sobic001G086500 Sobic003G252400--Sobic002G331450 Sobic003G252400--Sobic004G211301 Sobic003G252400--Sobic003G397500 Sobic002G110200 Sobic002G110200 Sobic003G252400--Sobic002G110200 Sobic003G252400--Sobic010G085400 Sobic003G252400--Sobic005G060600 Sobic002G013900 Sobic002G013900 Sobic003G252400--Sobic002G013900 Sobic003G252400--Sobic002G325600 Sobic007G131700 Sobic007G131700 Sobic003G252400--Sobic007G131700 Sobic002G103100 Sobic002G103100 Sobic003G164950--Sobic002G103100 Sobic008G089800 Sobic008G089800 Sobic003G164950--Sobic008G089800 Sobic003G164950--Sobic006G056800 Sobic004G188000 Sobic004G188000 Sobic003G164950--Sobic004G188000 Sobic002G022100 Sobic002G022100 Sobic003G164950--Sobic002G022100 Sobic003G164950--Sobic001G284475 Sobic003G418733 Sobic003G418733 Sobic003G164950--Sobic003G418733 Sobic006G061900 Sobic006G061900 Sobic003G164950--Sobic006G061900 Sobic002G118101 Sobic002G118101 Sobic003G164950--Sobic002G118101 Sobic005G016900 Sobic005G016900 Sobic003G251400--Sobic005G016900 Sobic003G251400--Sobic003G252400 Sobic003G251400--Sobic001G284475 Sobic003G251400--Sobic005G060600 Sobic007G169600 Sobic007G169600 Sobic003G251400--Sobic007G169600 Sobic003G251400--Sobic002G325600 Sobic003G251400--Sobic004G211301 Sobic003G251400--Sobic002G331450 Sobic003G397400 Sobic003G397400 Sobic003G251400--Sobic003G397400 Sobic001G086500--Sobic002G325600 Sobic008G075600 Sobic008G075600 Sobic001G086500--Sobic008G075600 Sobic001G086500--Sobic002G331450 Sobic001G086500--Sobic005G060600 Sobic001G086500--Sobic010G085400 Sobic007G153001 Sobic007G153001 Sobic001G086500--Sobic007G153001 Sobic001G086500--Sobic003G252400 Sobic001G086500--Sobic005G016900 Sobic001G086500--Sobic007G169600 Sobic004G211301--Sobic002G331450 Sobic009G128300 Sobic009G128300 Sobic004G211301--Sobic009G128300 Sobic004G211301--Sobic003G252400 Sobic004G211301--Sobic010G085400 Sobic004G211301--Sobic005G060600 Sobic002G182800 Sobic002G182800 Sobic004G211301--Sobic002G182800 Sobic003G233900 Sobic003G233900 Sobic004G211301--Sobic003G233900 Sobic004G211301--Sobic002G110200 Sobic004G211301--Sobic002G013900 Sobic003G397500--Sobic003G252400 Sobic003G397500--Sobic008G075600 Sobic003G397500--Sobic004G211301 Sobic003G397500--Sobic002G331450 Sobic010G026500 Sobic010G026500 Sobic003G397500--Sobic010G026500 Sobic003G397500--Sobic002G110200 Sobic002G229600 Sobic002G229600 Sobic003G397500--Sobic002G229600 Sobic003G397500--Sobic008G031300 Sobic003G397500--Sobic010G085400
Octagon: transcription factors


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