Gene annotation
Transcriptome id Sobic.001G284475.1
Synonym -
Functional annotation -
UniProt A0A1Z5S813
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G056800 - -
2 Sobic.006G038951 - -
3 Sobic.003G251400 lectin-like receptor kinase 1, putative, expressed -
4 Sobic.003G181201 - -
5 Sobic.003G252400 drought induced 19 protein, putative, expressed -
6 Sobic.010G217532 - -
7 Sobic.005G060600 - -
8 Sobic.007G213100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@citrate transporter, putative, expressed K14445: solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
9 Sobic.003G164950 - -
10 Sobic.001G086500 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS14 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
11 Sobic.001G236400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
12 Sobic.007G085001 - K02937: RP-L7e, large subunit ribosomal protein L7e
13 Sobic.002G119700 ankyrin repeat domain containing protein, expressed -
14 Sobic.003G397500 expressed protein -
15 Sobic.010G262500 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
16 Sobic.001G390200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
17 Sobic.004G211301 - -
18 Sobic.002G137800 gibberellin 20 oxidase 2, putative, expressed -
19 Sobic.008G075600 - -
20 Sobic.002G229600 - -


Gene co-expression network
sample Sobic001G284475 Sobic001G284475 Sobic006G056800 Sobic006G056800 Sobic001G284475--Sobic006G056800 Sobic006G038951 Sobic006G038951 Sobic001G284475--Sobic006G038951 Sobic003G251400 Sobic003G251400 Sobic001G284475--Sobic003G251400 Sobic003G181201 Sobic003G181201 Sobic001G284475--Sobic003G181201 Sobic003G252400 Sobic003G252400 Sobic001G284475--Sobic003G252400 Sobic010G217532 Sobic010G217532 Sobic001G284475--Sobic010G217532 Sobic005G060600 Sobic005G060600 Sobic001G284475--Sobic005G060600 Sobic007G213100 Sobic007G213100 Sobic001G284475--Sobic007G213100 Sobic003G164950 Sobic003G164950 Sobic001G284475--Sobic003G164950 Sobic006G056800--Sobic001G284475 Sobic006G056800--Sobic005G060600 Sobic006G056800--Sobic003G181201 Sobic006G056800--Sobic003G252400 Sobic006G056800--Sobic003G164950 Sobic006G056800--Sobic003G251400 Sobic001G086500 Sobic001G086500 Sobic006G056800--Sobic001G086500 Sobic004G211301 Sobic004G211301 Sobic006G056800--Sobic004G211301 Sobic003G397500 Sobic003G397500 Sobic006G056800--Sobic003G397500 Sobic006G038951--Sobic001G284475 Sobic006G038951--Sobic007G213100 Sobic006G038951--Sobic003G251400 Sobic006G038951--Sobic006G056800 Sobic004G332100 Sobic004G332100 Sobic006G038951--Sobic004G332100 Sobic010G251300 Sobic010G251300 Sobic006G038951--Sobic010G251300 Sobic010G033100 Sobic010G033100 Sobic006G038951--Sobic010G033100 Sobic010G060900 Sobic010G060900 Sobic006G038951--Sobic010G060900 Sobic007G062200 Sobic007G062200 Sobic006G038951--Sobic007G062200 Sobic005G016900 Sobic005G016900 Sobic003G251400--Sobic005G016900 Sobic003G251400--Sobic003G252400 Sobic003G251400--Sobic001G284475 Sobic003G251400--Sobic005G060600 Sobic007G169600 Sobic007G169600 Sobic003G251400--Sobic007G169600 Sobic002G325600 Sobic002G325600 Sobic003G251400--Sobic002G325600 Sobic003G251400--Sobic004G211301 Sobic002G331450 Sobic002G331450 Sobic003G251400--Sobic002G331450 Sobic003G397400 Sobic003G397400 Sobic003G251400--Sobic003G397400 Sobic003G181201--Sobic006G056800 Sobic003G181201--Sobic005G060600 Sobic003G181201--Sobic010G217532 Sobic003G181201--Sobic001G284475 Sobic009G097300 Sobic009G097300 Sobic003G181201--Sobic009G097300 Sobic003G181201--Sobic003G252400 Sobic003G181201--Sobic003G251400 Sobic003G281900 Sobic003G281900 Sobic003G181201--Sobic003G281900 Sobic003G181201--Sobic001G086500 Sobic003G252400--Sobic002G331450 Sobic003G252400--Sobic004G211301 Sobic003G252400--Sobic003G397500 Sobic002G110200 Sobic002G110200 Sobic003G252400--Sobic002G110200 Sobic010G085400 Sobic010G085400 Sobic003G252400--Sobic010G085400 Sobic003G252400--Sobic005G060600 Sobic002G013900 Sobic002G013900 Sobic003G252400--Sobic002G013900 Sobic003G252400--Sobic002G325600 Sobic007G131700 Sobic007G131700 Sobic003G252400--Sobic007G131700 Sobic010G026500 Sobic010G026500 Sobic010G217532--Sobic010G026500 Sobic010G217532--Sobic003G181201 Sobic010G217532--Sobic001G284475 Sobic001G082900 Sobic001G082900 Sobic010G217532--Sobic001G082900 Sobic008G059000 Sobic008G059000 Sobic010G217532--Sobic008G059000 Sobic009G231200 Sobic009G231200 Sobic010G217532--Sobic009G231200 Sobic007G124200 Sobic007G124200 Sobic010G217532--Sobic007G124200 Sobic010G217532--Sobic003G251400 Sobic008G075600 Sobic008G075600 Sobic010G217532--Sobic008G075600 Sobic005G060600--Sobic004G211301 Sobic005G060600--Sobic003G252400 Sobic005G060600--Sobic006G056800 Sobic005G060600--Sobic002G331450 Sobic005G060600--Sobic003G397500 Sobic001G112000 Sobic001G112000 Sobic005G060600--Sobic001G112000 Sobic005G060600--Sobic002G325600 Sobic008G031300 Sobic008G031300 Sobic005G060600--Sobic008G031300 Sobic005G060600--Sobic010G085400 Sobic002G321300 Sobic002G321300 Sobic007G213100--Sobic002G321300 Sobic003G051000 Sobic003G051000 Sobic007G213100--Sobic003G051000 Sobic007G146400 Sobic007G146400 Sobic007G213100--Sobic007G146400 Sobic003G339700 Sobic003G339700 Sobic007G213100--Sobic003G339700 Sobic001G160800 Sobic001G160800 Sobic007G213100--Sobic001G160800 Sobic007G213100--Sobic001G284475 Sobic009G069300 Sobic009G069300 Sobic007G213100--Sobic009G069300 Sobic007G213100--Sobic010G251300 Sobic008G171000 Sobic008G171000 Sobic007G213100--Sobic008G171000 Sobic002G103100 Sobic002G103100 Sobic003G164950--Sobic002G103100 Sobic008G089800 Sobic008G089800 Sobic003G164950--Sobic008G089800 Sobic003G164950--Sobic006G056800 Sobic004G188000 Sobic004G188000 Sobic003G164950--Sobic004G188000 Sobic002G022100 Sobic002G022100 Sobic003G164950--Sobic002G022100 Sobic003G164950--Sobic001G284475 Sobic003G418733 Sobic003G418733 Sobic003G164950--Sobic003G418733 Sobic006G061900 Sobic006G061900 Sobic003G164950--Sobic006G061900 Sobic002G118101 Sobic002G118101 Sobic003G164950--Sobic002G118101
Octagon: transcription factors


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