Gene annotation
Transcriptome id Sobic.003G210601.1
Synonym -
Functional annotation -
UniProt A0A1W0VYC6
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27004 PTHR27004:SF36
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G34930 : disease resistance family protein / LRR family protein
RAP-DB (Rice) LOC_Os01g41780.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@laccase-15 precursor, putative, expressed K05909: laccase
2 Sobic.004G175900 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
3 Sobic.009G181200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.001G145600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thaumatin family domain containing protein, expressed -
5 Sobic.010G047800 phospholipase, putative, expressed -
6 Sobic.003G216232 - -
7 Sobic.006G117400 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
8 Sobic.008G182600 thaumatin, putative, expressed -
9 Sobic.002G013400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G156300 expressed protein -
11 Sobic.002G011600 NB-ARC domain containing protein, expressed -
12 Sobic.009G061300 - -
13 Sobic.005G126200 Leucine-rich repeat protein 1(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
14 Sobic.009G197700 expressed protein -
15 Sobic.007G011700 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
16 Sobic.001G101400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII4 - Proteinase inhibitor II family protein precursor, expressed -
17 Sobic.003G374150 - -
18 Sobic.007G220000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
19 Sobic.005G136800 only inducible by pathogen inoculation(PubMedID : 20529887)@"SbCHS2 encodes a typical CHS that synthesizes naringenin chalcone, which is necessary for the formation of different flavonoid metabolites."(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
20 Sobic.010G148501 - -


Gene co-expression network
sample Sobic003G210601 Sobic003G210601 Sobic005G215300 Sobic005G215300 Sobic003G210601--Sobic005G215300 Sobic004G175900 Sobic004G175900 Sobic003G210601--Sobic004G175900 Sobic009G181200 Sobic009G181200 Sobic003G210601--Sobic009G181200 Sobic001G145600 Sobic001G145600 Sobic003G210601--Sobic001G145600 Sobic010G047800 Sobic010G047800 Sobic003G210601--Sobic010G047800 Sobic003G216232 Sobic003G216232 Sobic003G210601--Sobic003G216232 Sobic006G117400 Sobic006G117400 Sobic003G210601--Sobic006G117400 Sobic008G182600 Sobic008G182600 Sobic003G210601--Sobic008G182600 Sobic002G013400 Sobic002G013400 Sobic003G210601--Sobic002G013400 Sobic001G101400 Sobic001G101400 Sobic005G215300--Sobic001G101400 Sobic010G016800 Sobic010G016800 Sobic005G215300--Sobic010G016800 Sobic009G061300 Sobic009G061300 Sobic005G215300--Sobic009G061300 Sobic004G006966 Sobic004G006966 Sobic005G215300--Sobic004G006966 Sobic001G483500 Sobic001G483500 Sobic005G215300--Sobic001G483500 Sobic004G175900--Sobic005G215300 Sobic005G126200 Sobic005G126200 Sobic004G175900--Sobic005G126200 Sobic005G137400 Sobic005G137400 Sobic004G175900--Sobic005G137400 Sobic004G175900--Sobic002G013400 Sobic002G011600 Sobic002G011600 Sobic004G175900--Sobic002G011600 Sobic004G175900--Sobic003G210601 Sobic004G175900--Sobic001G145600 Sobic008G182800 Sobic008G182800 Sobic004G175900--Sobic008G182800 Sobic004G175900--Sobic001G101400 Sobic001G145700 Sobic001G145700 Sobic009G181200--Sobic001G145700 Sobic009G181200--Sobic006G117400 Sobic009G181200--Sobic008G182800 Sobic010G230800 Sobic010G230800 Sobic009G181200--Sobic010G230800 Sobic009G181200--Sobic008G182600 Sobic002G065700 Sobic002G065700 Sobic009G181200--Sobic002G065700 Sobic010G230900 Sobic010G230900 Sobic009G181200--Sobic010G230900 Sobic005G169200 Sobic005G169200 Sobic009G181200--Sobic005G169200 Sobic010G020200 Sobic010G020200 Sobic009G181200--Sobic010G020200 Sobic001G145600--Sobic002G011600 Sobic001G145600--Sobic001G145700 Sobic006G132500 Sobic006G132500 Sobic001G145600--Sobic006G132500 Sobic003G244600 Sobic003G244600 Sobic001G145600--Sobic003G244600 Sobic006G030700 Sobic006G030700 Sobic001G145600--Sobic006G030700 Sobic008G182300 Sobic008G182300 Sobic001G145600--Sobic008G182300 Sobic005G018500 Sobic005G018500 Sobic001G145600--Sobic005G018500 Sobic009G226300 Sobic009G226300 Sobic001G145600--Sobic009G226300 Sobic001G145600--Sobic009G181200 Sobic007G089101 Sobic007G089101 Sobic010G047800--Sobic007G089101 Sobic010G047800--Sobic001G145600 Sobic010G047800--Sobic001G145700 Sobic010G047800--Sobic005G215300 Sobic001G146200 Sobic001G146200 Sobic010G047800--Sobic001G146200 Sobic006G148500 Sobic006G148500 Sobic010G047800--Sobic006G148500 Sobic001G454200 Sobic001G454200 Sobic010G047800--Sobic001G454200 Sobic010G047800--Sobic003G216232 Sobic010G047800--Sobic001G101400 Sobic003G348400 Sobic003G348400 Sobic003G216232--Sobic003G348400 Sobic001G074200 Sobic001G074200 Sobic003G216232--Sobic001G074200 Sobic007G125900 Sobic007G125900 Sobic003G216232--Sobic007G125900 Sobic003G338400 Sobic003G338400 Sobic003G216232--Sobic003G338400 Sobic005G117400 Sobic005G117400 Sobic003G216232--Sobic005G117400 Sobic008G189200 Sobic008G189200 Sobic003G216232--Sobic008G189200 Sobic005G217200 Sobic005G217200 Sobic003G216232--Sobic005G217200 Sobic005G136300 Sobic005G136300 Sobic003G216232--Sobic005G136300 Sobic001G151800 Sobic001G151800 Sobic003G216232--Sobic001G151800 Sobic002G065500 Sobic002G065500 Sobic006G117400--Sobic002G065500 Sobic002G065600 Sobic002G065600 Sobic006G117400--Sobic002G065600 Sobic008G182400 Sobic008G182400 Sobic006G117400--Sobic008G182400 Sobic006G117400--Sobic002G065700 Sobic001G099400 Sobic001G099400 Sobic006G117400--Sobic001G099400 Sobic010G172800 Sobic010G172800 Sobic006G117400--Sobic010G172800 Sobic006G117400--Sobic008G182800 Sobic010G231000 Sobic010G231000 Sobic006G117400--Sobic010G231000 Sobic002G065800 Sobic002G065800 Sobic006G117400--Sobic002G065800 Sobic008G182600--Sobic008G182800 Sobic008G182600--Sobic005G169200 Sobic008G182600--Sobic008G182300 Sobic008G182600--Sobic001G145700 Sobic008G182600--Sobic006G117400 Sobic008G182600--Sobic009G181200 Sobic008G182600--Sobic005G126200 Sobic009G073500 Sobic009G073500 Sobic008G182600--Sobic009G073500 Sobic008G182600--Sobic008G182400 Sobic002G013400--Sobic005G137400 Sobic002G013400--Sobic010G230800 Sobic004G304200 Sobic004G304200 Sobic002G013400--Sobic004G304200 Sobic002G098200 Sobic002G098200 Sobic002G013400--Sobic002G098200 Sobic002G013400--Sobic010G230900 Sobic002G013400--Sobic005G169200 Sobic002G013400--Sobic005G126200 Sobic002G013400--Sobic002G011600 Sobic003G216000 Sobic003G216000 Sobic002G013400--Sobic003G216000
Octagon: transcription factors


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