Gene annotation
Transcriptome id Sobic.003G156300.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q3D5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g23705.1 : expressed protein
MaizeGDB (Corn) Zm00025a036183
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
2 Sobic.004G330900 Positive cytokinine regulator(PubMedID : 30367619)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
3 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
4 Sobic.004G297400 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05607: methylglutaconyl-CoA hydratase
5 Sobic.001G221100 ubiquitin family protein, putative, expressed K08770: ubiquitin C
6 Sobic.010G028950 - -
7 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
8 Sobic.001G524200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
9 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
10 Sobic.001G443900 peptide transporter PTR2, putative, expressed -
11 Sobic.006G052100 nodulin, putative, expressed -
12 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
14 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
15 Sobic.009G121100 expressed protein -
16 Sobic.006G132100 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
17 Sobic.003G045100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transmembrane protein, putative, expressed -
18 Sobic.005G181000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
19 Sobic.009G027000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00253: IVD, isovaleryl-CoA dehydrogenase
20 Sobic.001G447500 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase


Gene co-expression network
sample Sobic003G156300 Sobic003G156300 Sobic010G078100 Sobic010G078100 Sobic003G156300--Sobic010G078100 Sobic004G330900 Sobic004G330900 Sobic003G156300--Sobic004G330900 Sobic003G305400 Sobic003G305400 Sobic003G156300--Sobic003G305400 Sobic004G297400 Sobic004G297400 Sobic003G156300--Sobic004G297400 Sobic001G221100 Sobic001G221100 Sobic003G156300--Sobic001G221100 Sobic010G028950 Sobic010G028950 Sobic003G156300--Sobic010G028950 Sobic002G303000 Sobic002G303000 Sobic003G156300--Sobic002G303000 Sobic001G524200 Sobic001G524200 Sobic003G156300--Sobic001G524200 Sobic008G160700 Sobic008G160700 Sobic003G156300--Sobic008G160700 Sobic010G078100--Sobic008G160700 Sobic010G078100--Sobic002G303000 Sobic009G121100 Sobic009G121100 Sobic010G078100--Sobic009G121100 Sobic006G214500 Sobic006G214500 Sobic010G078100--Sobic006G214500 Sobic009G027000 Sobic009G027000 Sobic010G078100--Sobic009G027000 Sobic001G359400 Sobic001G359400 Sobic010G078100--Sobic001G359400 Sobic001G373100 Sobic001G373100 Sobic010G078100--Sobic001G373100 Sobic006G122400 Sobic006G122400 Sobic010G078100--Sobic006G122400 Sobic004G295800 Sobic004G295800 Sobic010G078100--Sobic004G295800 Sobic003G145900 Sobic003G145900 Sobic004G330900--Sobic003G145900 Sobic004G330900--Sobic009G121100 Sobic004G282400 Sobic004G282400 Sobic004G330900--Sobic004G282400 Sobic004G330900--Sobic001G221100 Sobic007G202600 Sobic007G202600 Sobic004G330900--Sobic007G202600 Sobic004G330900--Sobic002G303000 Sobic009G229800 Sobic009G229800 Sobic004G330900--Sobic009G229800 Sobic006G058600 Sobic006G058600 Sobic004G330900--Sobic006G058600 Sobic001G443900 Sobic001G443900 Sobic004G330900--Sobic001G443900 Sobic010G145900 Sobic010G145900 Sobic003G305400--Sobic010G145900 Sobic009G235900 Sobic009G235900 Sobic003G305400--Sobic009G235900 Sobic006G209500 Sobic006G209500 Sobic003G305400--Sobic006G209500 Sobic001G478300 Sobic001G478300 Sobic003G305400--Sobic001G478300 Sobic001G347600 Sobic001G347600 Sobic003G305400--Sobic001G347600 Sobic001G372000 Sobic001G372000 Sobic003G305400--Sobic001G372000 Sobic003G154700 Sobic003G154700 Sobic003G305400--Sobic003G154700 Sobic003G081100 Sobic003G081100 Sobic003G305400--Sobic003G081100 Sobic010G264400 Sobic010G264400 Sobic003G305400--Sobic010G264400 Sobic004G297400--Sobic009G027000 Sobic001G028700 Sobic001G028700 Sobic004G297400--Sobic001G028700 Sobic004G297400--Sobic006G122400 Sobic004G297400--Sobic010G078100 Sobic010G042900 Sobic010G042900 Sobic004G297400--Sobic010G042900 Sobic004G297400--Sobic008G160700 Sobic001G111366 Sobic001G111366 Sobic004G297400--Sobic001G111366 Sobic007G002200 Sobic007G002200 Sobic004G297400--Sobic007G002200 Sobic001G111500 Sobic001G111500 Sobic004G297400--Sobic001G111500 Sobic001G039700 Sobic001G039700 Sobic001G221100--Sobic001G039700 Sobic009G032300 Sobic009G032300 Sobic001G221100--Sobic009G032300 Sobic001G221100--Sobic010G042900 Sobic001G221100--Sobic003G145900 Sobic004G027100 Sobic004G027100 Sobic001G221100--Sobic004G027100 Sobic004G034400 Sobic004G034400 Sobic001G221100--Sobic004G034400 Sobic001G221100--Sobic004G330900 Sobic005G014950 Sobic005G014950 Sobic001G221100--Sobic005G014950 Sobic002G197100 Sobic002G197100 Sobic001G221100--Sobic002G197100 Sobic005G212600 Sobic005G212600 Sobic010G028950--Sobic005G212600 Sobic008G009500 Sobic008G009500 Sobic010G028950--Sobic008G009500 Sobic003G208700 Sobic003G208700 Sobic010G028950--Sobic003G208700 Sobic010G144000 Sobic010G144000 Sobic010G028950--Sobic010G144000 Sobic005G203400 Sobic005G203400 Sobic010G028950--Sobic005G203400 Sobic002G062300 Sobic002G062300 Sobic010G028950--Sobic002G062300 Sobic004G076732 Sobic004G076732 Sobic010G028950--Sobic004G076732 Sobic001G253100 Sobic001G253100 Sobic010G028950--Sobic001G253100 Sobic004G092300 Sobic004G092300 Sobic010G028950--Sobic004G092300 Sobic002G303000--Sobic010G078100 Sobic002G303000--Sobic009G121100 Sobic002G303000--Sobic008G160700 Sobic003G407300 Sobic003G407300 Sobic002G303000--Sobic003G407300 Sobic009G040700 Sobic009G040700 Sobic002G303000--Sobic009G040700 Sobic005G007800 Sobic005G007800 Sobic002G303000--Sobic005G007800 Sobic004G196700 Sobic004G196700 Sobic002G303000--Sobic004G196700 Sobic002G303000--Sobic009G235900 Sobic008G024600 Sobic008G024600 Sobic002G303000--Sobic008G024600 Sobic001G524200--Sobic004G027100 Sobic010G217400 Sobic010G217400 Sobic001G524200--Sobic010G217400 Sobic007G130600 Sobic007G130600 Sobic001G524200--Sobic007G130600 Sobic001G524200--Sobic003G145900 Sobic001G524200--Sobic005G007800 Sobic001G524200--Sobic010G078100 Sobic006G114500 Sobic006G114500 Sobic001G524200--Sobic006G114500 Sobic001G524200--Sobic002G303000 Sobic001G524200--Sobic009G121100 Sobic010G001600 Sobic010G001600 Sobic008G160700--Sobic010G001600 Sobic001G194900 Sobic001G194900 Sobic008G160700--Sobic001G194900 Sobic008G160700--Sobic010G078100 Sobic008G160700--Sobic007G130600 Sobic008G160700--Sobic009G235900 Sobic008G160700--Sobic006G214500 Sobic006G124900 Sobic006G124900 Sobic008G160700--Sobic006G124900 Sobic008G160700--Sobic002G303000 Sobic008G160700--Sobic009G027000
Octagon: transcription factors


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