Gene annotation
Transcriptome id Sobic.003G275900.1
Synonym Sb03g032795
Functional annotation expressed protein
UniProt A0A1B6Q5Q1
Pfam -
Panther DB PTHR33120 PTHR33120:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g51670.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G275900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G037000 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
2 Sobic.002G361100 similar to Glutathione transferase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.001G329800 allene oxide cyclase 4, chloroplast precursor, putative, expressed K10525: allene oxide cyclase
4 Sobic.010G238600 transferase family protein, putative, expressed -
5 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
6 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
7 Sobic.004G088551 - -
8 Sobic.004G115500 expressed protein -
9 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.001G082200 cytochrome P450, putative, expressed -
11 Sobic.002G139400 AP2 domain containing protein, expressed -
12 Sobic.002G104900 B12D protein, putative, expressed -
13 Sobic.001G357100 ZOS9-11 - C2H2 zinc finger protein, expressed -
14 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -
15 Sobic.010G084600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
16 Sobic.004G112300 - -
17 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
18 Sobic.003G349600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-14 - C2H2 zinc finger protein, expressed -
19 Sobic.005G016700 DUF567 domain containing protein, putative, expressed -
20 Sobic.001G495148 - -


Gene co-expression network
sample Sobic003G275900 Sobic003G275900 Sobic004G037000 Sobic004G037000 Sobic003G275900--Sobic004G037000 Sobic002G361100 Sobic002G361100 Sobic003G275900--Sobic002G361100 Sobic001G329800 Sobic001G329800 Sobic003G275900--Sobic001G329800 Sobic010G238600 Sobic010G238600 Sobic003G275900--Sobic010G238600 Sobic001G231600 Sobic001G231600 Sobic003G275900--Sobic001G231600 Sobic007G155200 Sobic007G155200 Sobic003G275900--Sobic007G155200 Sobic004G088551 Sobic004G088551 Sobic003G275900--Sobic004G088551 Sobic004G115500 Sobic004G115500 Sobic003G275900--Sobic004G115500 Sobic009G224100 Sobic009G224100 Sobic003G275900--Sobic009G224100 Sobic004G037000--Sobic007G155200 Sobic004G037000--Sobic002G361100 Sobic010G084600 Sobic010G084600 Sobic004G037000--Sobic010G084600 Sobic002G184200 Sobic002G184200 Sobic004G037000--Sobic002G184200 Sobic010G084700 Sobic010G084700 Sobic004G037000--Sobic010G084700 Sobic004G037000--Sobic009G224100 Sobic004G221500 Sobic004G221500 Sobic004G037000--Sobic004G221500 Sobic006G207000 Sobic006G207000 Sobic004G037000--Sobic006G207000 Sobic010G196600 Sobic010G196600 Sobic004G037000--Sobic010G196600 Sobic009G061200 Sobic009G061200 Sobic002G361100--Sobic009G061200 Sobic001G319600 Sobic001G319600 Sobic002G361100--Sobic001G319600 Sobic001G387900 Sobic001G387900 Sobic002G361100--Sobic001G387900 Sobic003G078100 Sobic003G078100 Sobic002G361100--Sobic003G078100 Sobic002G361100--Sobic009G224100 Sobic002G361100--Sobic004G037000 Sobic002G361100--Sobic010G084600 Sobic001G108200 Sobic001G108200 Sobic002G361100--Sobic001G108200 Sobic004G216600 Sobic004G216600 Sobic002G361100--Sobic004G216600 Sobic001G329800--Sobic007G155200 Sobic004G228500 Sobic004G228500 Sobic001G329800--Sobic004G228500 Sobic003G323700 Sobic003G323700 Sobic001G329800--Sobic003G323700 Sobic009G036000 Sobic009G036000 Sobic001G329800--Sobic009G036000 Sobic009G036100 Sobic009G036100 Sobic001G329800--Sobic009G036100 Sobic006G066200 Sobic006G066200 Sobic001G329800--Sobic006G066200 Sobic001G015100 Sobic001G015100 Sobic001G329800--Sobic001G015100 Sobic001G330100 Sobic001G330100 Sobic001G329800--Sobic001G330100 Sobic010G223600 Sobic010G223600 Sobic001G329800--Sobic010G223600 Sobic003G430400 Sobic003G430400 Sobic010G238600--Sobic003G430400 Sobic002G140400 Sobic002G140400 Sobic010G238600--Sobic002G140400 Sobic003G334600 Sobic003G334600 Sobic010G238600--Sobic003G334600 Sobic010G238600--Sobic001G015100 Sobic003G364600 Sobic003G364600 Sobic010G238600--Sobic003G364600 Sobic010G238600--Sobic007G155200 Sobic010G238600--Sobic009G036000 Sobic002G333400 Sobic002G333400 Sobic010G238600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic010G238600--Sobic006G056400 Sobic007G135201 Sobic007G135201 Sobic001G231600--Sobic007G135201 Sobic007G067600 Sobic007G067600 Sobic001G231600--Sobic007G067600 Sobic001G495164 Sobic001G495164 Sobic001G231600--Sobic001G495164 Sobic006G084600 Sobic006G084600 Sobic001G231600--Sobic006G084600 Sobic007G067350 Sobic007G067350 Sobic001G231600--Sobic007G067350 Sobic010G102300 Sobic010G102300 Sobic001G231600--Sobic010G102300 Sobic002G195400 Sobic002G195400 Sobic001G231600--Sobic002G195400 Sobic004G128400 Sobic004G128400 Sobic001G231600--Sobic004G128400 Sobic001G231600--Sobic004G221500 Sobic007G155200--Sobic009G224100 Sobic007G155200--Sobic002G184200 Sobic005G045900 Sobic005G045900 Sobic007G155200--Sobic005G045900 Sobic007G155200--Sobic002G140400 Sobic007G155200--Sobic004G037000 Sobic007G155200--Sobic010G196600 Sobic007G155200--Sobic004G228500 Sobic003G349600 Sobic003G349600 Sobic007G155200--Sobic003G349600 Sobic002G139400 Sobic002G139400 Sobic007G155200--Sobic002G139400 Sobic001G317000 Sobic001G317000 Sobic004G088551--Sobic001G317000 Sobic004G088551--Sobic002G195400 Sobic005G101800 Sobic005G101800 Sobic004G088551--Sobic005G101800 Sobic004G088551--Sobic007G067600 Sobic010G117900 Sobic010G117900 Sobic004G088551--Sobic010G117900 Sobic001G317200 Sobic001G317200 Sobic004G088551--Sobic001G317200 Sobic001G423800 Sobic001G423800 Sobic004G088551--Sobic001G423800 Sobic007G061300 Sobic007G061300 Sobic004G088551--Sobic007G061300 Sobic004G112300 Sobic004G112300 Sobic004G088551--Sobic004G112300 Sobic001G357100 Sobic001G357100 Sobic004G115500--Sobic001G357100 Sobic007G169500 Sobic007G169500 Sobic004G115500--Sobic007G169500 Sobic008G054150 Sobic008G054150 Sobic004G115500--Sobic008G054150 Sobic009G009400 Sobic009G009400 Sobic004G115500--Sobic009G009400 Sobic001G343601 Sobic001G343601 Sobic004G115500--Sobic001G343601 Sobic009G043700 Sobic009G043700 Sobic004G115500--Sobic009G043700 Sobic004G115500--Sobic010G084600 Sobic004G341000 Sobic004G341000 Sobic004G115500--Sobic004G341000 Sobic004G115500--Sobic004G037000 Sobic004G243100 Sobic004G243100 Sobic009G224100--Sobic004G243100 Sobic009G224100--Sobic002G139400 Sobic009G224100--Sobic002G184200 Sobic008G187001 Sobic008G187001 Sobic009G224100--Sobic008G187001 Sobic009G224100--Sobic007G155200 Sobic009G224100--Sobic001G423800 Sobic002G388900 Sobic002G388900 Sobic009G224100--Sobic002G388900 Sobic001G192200 Sobic001G192200 Sobic009G224100--Sobic001G192200 Sobic009G224100--Sobic001G330100
Octagon: transcription factors


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