Gene annotation
Transcriptome id Sobic.003G280600.2,Sobic.003G280600.1
Synonym Sb03g033220
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
senescence-associated protein, putative, expressed
UniProt A0A1B6Q5T1 , A0A1B6Q5S6
Pfam PF06911
Panther DB PTHR21068 PTHR21068:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21600 : Senescence/dehydration-associated protein-related
RAP-DB (Rice) LOC_Os01g52480.1 : senescence-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a038993
Brachypodium KQK09532
Barley HORVU3Hr1G068620.3 , HORVU3Hr1G068620.2 , HORVU3Hr1G068620.1 , HORVU3Hr1G068620.7 , HORVU3Hr1G068620.5 , HORVU3Hr1G068620.4 , HORVU3Hr1G068620.9 , HORVU3Hr1G068620.12 , HORVU3Hr1G068620.11 , HORVU3Hr1G068620.10
Wheat TraesCS3A02G286100 , TraesCS3A02G286100 , TraesCS3B02G320400 , TraesCS3B02G320400 , TraesCS3D02G285900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G027200 tetraspanin family protein, putative, expressed -
2 Sobic.002G361600 ZOS7-10 - C2H2 zinc finger protein, expressed -
3 Sobic.002G145600 expressed protein -
4 Sobic.001G207301 - -
5 Sobic.010G132100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thioredoxin domain-containing protein 17, putative, expressed -
6 Sobic.003G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
7 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
8 Sobic.004G259800 acetyltransferase, GNAT family, putative, expressed K00621: GNPNAT1, glucosamine-phosphate N-acetyltransferase
9 Sobic.003G314200 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.009G223400 hypro1, putative, expressed -
11 Sobic.003G319200 EF hand family protein, putative, expressed -
12 Sobic.010G252800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.008G040800 OsFBX396 - F-box domain containing protein, expressed -
14 Sobic.010G234100 - -
15 Sobic.004G313750 - -
16 Sobic.003G034350 - -
17 Sobic.010G124133 - -
18 Sobic.001G097800 - -
19 Sobic.001G396200 TENA/THI-4 family protein, putative, expressed -
20 Sobic.001G449300 LYK, putative, expressed -


Gene co-expression network
sample Sobic003G280600 Sobic003G280600 Sobic009G027200 Sobic009G027200 Sobic003G280600--Sobic009G027200 Sobic002G361600 Sobic002G361600 Sobic003G280600--Sobic002G361600 Sobic002G145600 Sobic002G145600 Sobic003G280600--Sobic002G145600 Sobic001G207301 Sobic001G207301 Sobic003G280600--Sobic001G207301 Sobic010G132100 Sobic010G132100 Sobic003G280600--Sobic010G132100 Sobic003G134100 Sobic003G134100 Sobic003G280600--Sobic003G134100 Sobic006G205800 Sobic006G205800 Sobic003G280600--Sobic006G205800 Sobic004G259800 Sobic004G259800 Sobic003G280600--Sobic004G259800 Sobic003G314200 Sobic003G314200 Sobic003G280600--Sobic003G314200 Sobic006G217400 Sobic006G217400 Sobic009G027200--Sobic006G217400 Sobic007G200700 Sobic007G200700 Sobic009G027200--Sobic007G200700 Sobic003G226600 Sobic003G226600 Sobic009G027200--Sobic003G226600 Sobic008G093300 Sobic008G093300 Sobic009G027200--Sobic008G093300 Sobic004G115100 Sobic004G115100 Sobic009G027200--Sobic004G115100 Sobic006G029850 Sobic006G029850 Sobic009G027200--Sobic006G029850 Sobic009G027200--Sobic001G207301 Sobic006G035350 Sobic006G035350 Sobic009G027200--Sobic006G035350 Sobic008G100201 Sobic008G100201 Sobic009G027200--Sobic008G100201 Sobic004G349237 Sobic004G349237 Sobic002G361600--Sobic004G349237 Sobic003G265150 Sobic003G265150 Sobic002G361600--Sobic003G265150 Sobic002G421501 Sobic002G421501 Sobic002G361600--Sobic002G421501 Sobic003G414900 Sobic003G414900 Sobic002G361600--Sobic003G414900 Sobic001G097800 Sobic001G097800 Sobic002G361600--Sobic001G097800 Sobic004G034100 Sobic004G034100 Sobic002G361600--Sobic004G034100 Sobic002G311300 Sobic002G311300 Sobic002G361600--Sobic002G311300 Sobic002G242100 Sobic002G242100 Sobic002G361600--Sobic002G242100 Sobic006G130700 Sobic006G130700 Sobic002G361600--Sobic006G130700 Sobic004G313750 Sobic004G313750 Sobic002G145600--Sobic004G313750 Sobic002G145600--Sobic010G132100 Sobic010G124133 Sobic010G124133 Sobic002G145600--Sobic010G124133 Sobic001G377400 Sobic001G377400 Sobic002G145600--Sobic001G377400 Sobic002G145600--Sobic004G259800 Sobic003G034350 Sobic003G034350 Sobic002G145600--Sobic003G034350 Sobic004G248000 Sobic004G248000 Sobic002G145600--Sobic004G248000 Sobic010G252800 Sobic010G252800 Sobic002G145600--Sobic010G252800 Sobic007G177901 Sobic007G177901 Sobic002G145600--Sobic007G177901 Sobic003G169700 Sobic003G169700 Sobic001G207301--Sobic003G169700 SobicK031400 SobicK031400 Sobic001G207301--SobicK031400 Sobic001G207301--Sobic006G217400 Sobic004G332200 Sobic004G332200 Sobic001G207301--Sobic004G332200 Sobic001G207301--Sobic006G205800 Sobic006G261650 Sobic006G261650 Sobic001G207301--Sobic006G261650 Sobic003G163000 Sobic003G163000 Sobic001G207301--Sobic003G163000 Sobic001G420150 Sobic001G420150 Sobic001G207301--Sobic001G420150 Sobic004G291300 Sobic004G291300 Sobic001G207301--Sobic004G291300 Sobic010G132100--Sobic009G027200 Sobic002G112200 Sobic002G112200 Sobic010G132100--Sobic002G112200 Sobic004G223700 Sobic004G223700 Sobic010G132100--Sobic004G223700 Sobic001G050650 Sobic001G050650 Sobic010G132100--Sobic001G050650 Sobic007G098050 Sobic007G098050 Sobic010G132100--Sobic007G098050 Sobic001G449300 Sobic001G449300 Sobic010G132100--Sobic001G449300 Sobic010G098800 Sobic010G098800 Sobic010G132100--Sobic010G098800 Sobic004G206000 Sobic004G206000 Sobic010G132100--Sobic004G206000 Sobic010G132100--SobicK031400 Sobic003G134100--Sobic001G207301 Sobic003G134100--Sobic006G205800 Sobic010G192700 Sobic010G192700 Sobic003G134100--Sobic010G192700 Sobic003G134100--Sobic009G027200 Sobic003G134100--Sobic010G132100 Sobic003G134100--Sobic003G226600 Sobic003G134100--Sobic006G217400 Sobic003G134100--Sobic002G145600 Sobic003G134100--Sobic003G314200 Sobic006G205800--Sobic001G207301 Sobic006G112000 Sobic006G112000 Sobic006G205800--Sobic006G112000 Sobic006G205800--Sobic003G314200 Sobic003G348900 Sobic003G348900 Sobic006G205800--Sobic003G348900 Sobic006G205800--Sobic001G097800 Sobic006G094800 Sobic006G094800 Sobic006G205800--Sobic006G094800 Sobic008G040800 Sobic008G040800 Sobic006G205800--Sobic008G040800 Sobic007G159300 Sobic007G159300 Sobic006G205800--Sobic007G159300 Sobic002G215866 Sobic002G215866 Sobic006G205800--Sobic002G215866 Sobic004G259800--Sobic002G145600 Sobic004G259800--Sobic010G132100 Sobic008G174850 Sobic008G174850 Sobic004G259800--Sobic008G174850 Sobic004G259800--Sobic001G449300 Sobic002G248800 Sobic002G248800 Sobic004G259800--Sobic002G248800 Sobic009G134766 Sobic009G134766 Sobic004G259800--Sobic009G134766 Sobic009G255400 Sobic009G255400 Sobic004G259800--Sobic009G255400 Sobic002G075300 Sobic002G075300 Sobic004G259800--Sobic002G075300 Sobic004G259800--Sobic007G177901 Sobic003G314200--Sobic008G040800 Sobic003G314200--Sobic006G205800 Sobic003G314200--Sobic006G094800 Sobic001G148000 Sobic001G148000 Sobic003G314200--Sobic001G148000 Sobic003G314200--Sobic003G226600 Sobic003G314200--Sobic009G027200 Sobic003G314200--Sobic001G207301 Sobic001G501701 Sobic001G501701 Sobic003G314200--Sobic001G501701 Sobic004G338200 Sobic004G338200 Sobic003G314200--Sobic004G338200
Octagon: transcription factors


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