Gene annotation
Transcriptome id Sobic.003G283000.1
Synonym Sb03g033430
Functional annotation expressed protein
UniProt A0A1W0VZB3
Pfam PF04520
Panther DB PTHR33083 PTHR33083:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29640 : Protein of unknown function, DUF584
RAP-DB (Rice) LOC_Os01g52740.1 : expressed protein
MaizeGDB (Corn) Zm00025a027721
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G283000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G153300 RING-H2 finger protein ATL3J, putative, expressed K10663: E3 ubiquitin-protein ligase ATL4
2 Sobic.010G015400 pentatricopeptide, putative, expressed -
3 Sobic.007G224700 expressed protein -
4 Sobic.004G273550 - -
5 Sobic.002G215600 BRCA1 C Terminus domain containing protein, expressed -
6 Sobic.009G079700 C2 domain containing protein, putative, expressed -
7 Sobic.004G167500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.010G210400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
9 Sobic.010G187950 - -
10 Sobic.002G259900 expressed protein -
11 Sobic.006G118150 - -
12 Sobic.003G438100 expressed protein -
13 Sobic.002G274000 OsSub59 - Putative Subtilisin homologue, expressed -
14 Sobic.001G061300 - -
15 Sobic.004G045000 phytosulfokine receptor precursor, putative, expressed -
16 Sobic.004G007200 - -
17 Sobic.001G468900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@DUF623 domain containing protein, expressed -
18 Sobic.004G212250 - -
19 Sobic.001G442750 - -
20 Sobic.003G059500 verticillium wilt disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic003G283000 Sobic003G283000 Sobic008G153300 Sobic008G153300 Sobic003G283000--Sobic008G153300 Sobic010G015400 Sobic010G015400 Sobic003G283000--Sobic010G015400 Sobic007G224700 Sobic007G224700 Sobic003G283000--Sobic007G224700 Sobic004G273550 Sobic004G273550 Sobic003G283000--Sobic004G273550 Sobic002G215600 Sobic002G215600 Sobic003G283000--Sobic002G215600 Sobic009G079700 Sobic009G079700 Sobic003G283000--Sobic009G079700 Sobic004G167500 Sobic004G167500 Sobic003G283000--Sobic004G167500 Sobic010G210400 Sobic010G210400 Sobic003G283000--Sobic010G210400 Sobic010G187950 Sobic010G187950 Sobic003G283000--Sobic010G187950 Sobic008G153300--Sobic002G215600 Sobic008G153300--Sobic007G224700 Sobic008G153300--Sobic010G015400 Sobic008G153300--Sobic010G187950 Sobic008G153300--Sobic004G273550 Sobic008G153300--Sobic004G167500 Sobic003G438100 Sobic003G438100 Sobic008G153300--Sobic003G438100 Sobic008G153300--Sobic009G079700 Sobic007G210200 Sobic007G210200 Sobic008G153300--Sobic007G210200 Sobic010G015400--Sobic007G224700 Sobic010G015400--Sobic004G273550 Sobic010G015400--Sobic008G153300 Sobic010G015400--Sobic003G438100 Sobic010G015400--Sobic010G187950 Sobic010G168100 Sobic010G168100 Sobic010G015400--Sobic010G168100 Sobic005G205100 Sobic005G205100 Sobic010G015400--Sobic005G205100 Sobic010G015400--Sobic002G215600 Sobic009G018100 Sobic009G018100 Sobic010G015400--Sobic009G018100 Sobic007G224700--Sobic010G015400 Sobic007G224700--Sobic008G153300 Sobic007G224700--Sobic004G273550 Sobic007G224700--Sobic010G187950 Sobic006G118150 Sobic006G118150 Sobic007G224700--Sobic006G118150 Sobic007G224700--Sobic003G438100 Sobic007G224700--Sobic004G167500 Sobic007G224700--Sobic002G215600 Sobic002G274000 Sobic002G274000 Sobic007G224700--Sobic002G274000 Sobic004G273550--Sobic010G015400 Sobic004G273550--Sobic007G224700 Sobic004G273550--Sobic008G153300 Sobic004G273550--Sobic006G118150 Sobic007G077466 Sobic007G077466 Sobic004G273550--Sobic007G077466 Sobic004G273550--Sobic002G274000 Sobic004G273550--Sobic009G079700 Sobic009G183650 Sobic009G183650 Sobic004G273550--Sobic009G183650 Sobic004G007200 Sobic004G007200 Sobic004G273550--Sobic004G007200 Sobic006G049000 Sobic006G049000 Sobic002G215600--Sobic006G049000 Sobic002G215600--Sobic008G153300 Sobic003G059500 Sobic003G059500 Sobic002G215600--Sobic003G059500 Sobic002G215600--Sobic004G167500 Sobic004G045000 Sobic004G045000 Sobic002G215600--Sobic004G045000 Sobic003G356500 Sobic003G356500 Sobic002G215600--Sobic003G356500 Sobic002G215600--Sobic003G438100 Sobic001G468900 Sobic001G468900 Sobic002G215600--Sobic001G468900 Sobic001G367900 Sobic001G367900 Sobic002G215600--Sobic001G367900 Sobic009G079700--Sobic010G210400 Sobic005G110553 Sobic005G110553 Sobic009G079700--Sobic005G110553 Sobic001G334400 Sobic001G334400 Sobic009G079700--Sobic001G334400 Sobic006G268100 Sobic006G268100 Sobic009G079700--Sobic006G268100 Sobic009G079700--Sobic002G274000 Sobic009G079700--Sobic004G007200 Sobic009G079700--Sobic009G183650 Sobic004G343733 Sobic004G343733 Sobic009G079700--Sobic004G343733 Sobic009G079700--Sobic008G153300 Sobic004G167500--Sobic003G059500 Sobic004G167500--Sobic002G215600 Sobic004G167500--Sobic006G049000 Sobic004G167500--Sobic010G187950 Sobic004G167500--Sobic003G356500 Sobic004G167500--Sobic008G153300 Sobic001G071500 Sobic001G071500 Sobic004G167500--Sobic001G071500 Sobic004G167500--Sobic003G438100 Sobic004G167500--Sobic001G468900 Sobic010G210400--Sobic009G079700 Sobic001G070900 Sobic001G070900 Sobic010G210400--Sobic001G070900 Sobic004G272000 Sobic004G272000 Sobic010G210400--Sobic004G272000 Sobic004G089801 Sobic004G089801 Sobic010G210400--Sobic004G089801 Sobic010G210400--Sobic004G007200 Sobic002G365300 Sobic002G365300 Sobic010G210400--Sobic002G365300 Sobic010G210400--Sobic004G343733 Sobic010G210400--Sobic010G187950 Sobic010G210400--Sobic002G215600 Sobic001G228500 Sobic001G228500 Sobic010G187950--Sobic001G228500 Sobic010G187950--Sobic007G224700 Sobic002G043201 Sobic002G043201 Sobic010G187950--Sobic002G043201 Sobic010G187950--Sobic010G015400 Sobic010G187950--Sobic008G153300 Sobic010G187950--Sobic004G167500 Sobic002G426201 Sobic002G426201 Sobic010G187950--Sobic002G426201 Sobic010G187950--Sobic002G215600 Sobic010G187950--Sobic002G274000
Octagon: transcription factors


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