Gene annotation
Transcriptome id Sobic.003G323500.1
Synonym Sb03g036980,
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Up-reguralion under drought (PubMedID : 24916767)
protein disulfide isomerase, putative, expressed
UniProt C5XME0
Pfam PF13905
Panther DB PTHR13871 PTHR13871:SF48
NCBI CDD KOG2501; Thioredoxin, nucleoredoxin and related proteins
KEGG Orthology K17609; nucleoredoxin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60420 : DC1 domain-containing protein
RAP-DB (Rice) LOC_Os01g58194.1 : protein disulfide isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a039860
Brachypodium PNT73028 , KQK10149
Barley HORVU3Hr1G077930.3 , HORVU3Hr1G077930.2 , HORVU3Hr1G077930.1 , HORVU3Hr1G077930.7 , HORVU3Hr1G077930.6 , HORVU3Hr1G077930.5 , HORVU3Hr1G077930.4 , HORVU3Hr1G077930.9 , HORVU3Hr1G077930.8 , HORVU3Hr1G077930.13 , HORVU3Hr1G077930.12 , HORVU3Hr1G077930.11 , HORVU3Hr1G077930.10 , HORVU3Hr1G077930.16 , HORVU3Hr1G077930.15 , HORVU3Hr1G077930.14
Wheat TraesCS3D02G320500 , TraesCS3B02G356500 , TraesCS3A02G327100
Populus -


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cDNA sequences
Sobic.003G323500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
2 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
3 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
4 Sobic.002G187900 expressed protein -
5 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
6 Sobic.006G255200 - -
7 Sobic.002G374000 - -
8 Sobic.010G000200 expressed protein -
9 Sobic.002G110600 regulatory protein, putative, expressed -
10 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -
11 Sobic.001G424650 - -
12 Sobic.004G315400 cation efflux family protein, putative, expressed -
13 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
14 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
15 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
16 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
17 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
18 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
19 Sobic.004G072201 - -
20 Sobic.004G127600 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase


Gene co-expression network
sample Sobic003G323500 Sobic003G323500 Sobic001G212900 Sobic001G212900 Sobic003G323500--Sobic001G212900 Sobic001G109400 Sobic001G109400 Sobic003G323500--Sobic001G109400 Sobic003G225200 Sobic003G225200 Sobic003G323500--Sobic003G225200 Sobic002G187900 Sobic002G187900 Sobic003G323500--Sobic002G187900 Sobic001G492400 Sobic001G492400 Sobic003G323500--Sobic001G492400 Sobic006G255200 Sobic006G255200 Sobic003G323500--Sobic006G255200 Sobic002G374000 Sobic002G374000 Sobic003G323500--Sobic002G374000 Sobic010G000200 Sobic010G000200 Sobic003G323500--Sobic010G000200 Sobic002G110600 Sobic002G110600 Sobic003G323500--Sobic002G110600 Sobic001G212900--Sobic001G109400 Sobic006G249600 Sobic006G249600 Sobic001G212900--Sobic006G249600 Sobic001G212900--Sobic002G187900 Sobic001G212900--Sobic002G374000 Sobic001G212900--Sobic010G000200 Sobic001G212900--Sobic002G110600 Sobic004G127600 Sobic004G127600 Sobic001G212900--Sobic004G127600 Sobic004G173200 Sobic004G173200 Sobic001G212900--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic001G212900--Sobic010G012200 Sobic001G109400--Sobic001G212900 Sobic004G072201 Sobic004G072201 Sobic001G109400--Sobic004G072201 Sobic001G109400--Sobic002G374000 Sobic001G109400--Sobic002G187900 Sobic001G383200 Sobic001G383200 Sobic001G109400--Sobic001G383200 Sobic001G109400--Sobic006G249600 Sobic001G109400--Sobic006G255200 Sobic004G315400 Sobic004G315400 Sobic001G109400--Sobic004G315400 Sobic008G016800 Sobic008G016800 Sobic001G109400--Sobic008G016800 Sobic003G225200--Sobic010G000200 Sobic003G225200--Sobic001G212900 Sobic001G503700 Sobic001G503700 Sobic003G225200--Sobic001G503700 Sobic003G225200--Sobic001G492400 Sobic003G225200--Sobic004G173200 Sobic003G225200--Sobic002G110600 Sobic008G103400 Sobic008G103400 Sobic003G225200--Sobic008G103400 Sobic003G225200--Sobic002G187900 Sobic007G077466 Sobic007G077466 Sobic003G225200--Sobic007G077466 Sobic003G263900 Sobic003G263900 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic004G227700 Sobic004G227700 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G398600 Sobic002G398600 Sobic002G187900--Sobic002G398600 Sobic001G424650 Sobic001G424650 Sobic001G492400--Sobic001G424650 Sobic001G492400--Sobic002G187900 Sobic009G088300 Sobic009G088300 Sobic001G492400--Sobic009G088300 Sobic001G492400--Sobic004G173200 Sobic001G370800 Sobic001G370800 Sobic001G492400--Sobic001G370800 Sobic001G492400--Sobic006G255200 Sobic001G492400--Sobic003G225200 Sobic002G262850 Sobic002G262850 Sobic001G492400--Sobic002G262850 Sobic008G177100 Sobic008G177100 Sobic001G492400--Sobic008G177100 Sobic006G255200--Sobic002G187900 Sobic006G255200--Sobic003G263900 Sobic002G309300 Sobic002G309300 Sobic006G255200--Sobic002G309300 Sobic001G442000 Sobic001G442000 Sobic006G255200--Sobic001G442000 Sobic006G255200--Sobic004G127600 Sobic006G255200--Sobic004G072201 Sobic006G255200--Sobic001G109400 Sobic004G218400 Sobic004G218400 Sobic006G255200--Sobic004G218400 Sobic006G255200--Sobic001G370800 Sobic002G374000--Sobic004G072201 Sobic002G374000--Sobic001G109400 Sobic002G374000--Sobic004G315400 Sobic002G374000--Sobic001G212900 Sobic002G374000--Sobic001G383200 Sobic002G374000--Sobic004G127600 Sobic007G183600 Sobic007G183600 Sobic002G374000--Sobic007G183600 Sobic003G069601 Sobic003G069601 Sobic002G374000--Sobic003G069601 Sobic002G374000--Sobic010G012200 Sobic010G000200--Sobic004G173200 Sobic010G000200--Sobic010G012200 Sobic003G362800 Sobic003G362800 Sobic010G000200--Sobic003G362800 Sobic010G000200--Sobic001G212900 Sobic003G155000 Sobic003G155000 Sobic010G000200--Sobic003G155000 Sobic003G262600 Sobic003G262600 Sobic010G000200--Sobic003G262600 Sobic010G000200--Sobic001G370800 Sobic010G000200--Sobic002G187900 Sobic010G000200--Sobic003G225200 Sobic002G110600--Sobic008G103400 Sobic002G110600--Sobic008G016800 Sobic002G110600--Sobic001G212900 Sobic002G110600--Sobic003G362800 Sobic002G110600--Sobic004G173200 Sobic002G110600--Sobic010G012200 Sobic002G110600--Sobic001G109400 Sobic002G110600--Sobic004G315400 Sobic002G110600--Sobic002G398600
Octagon: transcription factors


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