Gene annotation
| Transcriptome id | Sobic.003G327400.1 |
|---|---|
| Synonym | Sb03g037340, EDL3 |
| Functional annotation | circadian clock coupling factor-related, putative, expressed |
| UniProt | C5XMI1 |
| Pfam | PF12937 |
| Panther DB | PTHR31348 PTHR31348:SF3 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT3G63060 : EID1-like 3 |
|---|---|
| RAP-DB (Rice) | LOC_Os01g58850.1 : circadian clock coupling factor-related, putative, expressed |
| MaizeGDB (Corn) | Zm00025a027177 , Zm00025a044088 , Zm00025a037835 |
| Brachypodium | KQK05625 , KQK10200 |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G114800 | - | - |
| 2 | Sobic.007G194900 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsFBX303 - F-box domain containing protein, expressed | - |
| 3 | Sobic.004G142500 | Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed | - |
| 4 | Sobic.001G463450 | - | - |
| 5 | Sobic.001G463450 | - | - |
| 6 | Sobic.001G463450 | - | - |
| 7 | Sobic.001G463450 | - | - |
| 8 | Sobic.001G463450 | - | - |
| 9 | Sobic.001G463450 | - | - |
| 10 | Sobic.003G271800 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed | - |
| 11 | Sobic.004G283550 | - | - |
| 12 | Sobic.007G109800 | Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed | - |
| 13 | Sobic.005G062500 | - | - |
| 14 | Sobic.003G236551 | - | - |
| 15 | Sobic.003G028000 | Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | K09286: EREBP-like factor |
| 16 | Sobic.001G346200 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed | - |
| 17 | Sobic.007G088300 | late embryogenesis abundant group 1, putative, expressed | - |
| 18 | Sobic.001G165200 | B3 DNA binding domain containing protein | - |
| 19 | Sobic.001G515700 | expressed protein | - |
| 20 | Sobic.009G168800 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@phosphatidylethanolamine-binding protein, putative, expressed | K06910: PEBP1, phosphatidylethanolamine-binding protein |
Gene co-expression network
Octagon: transcription factors
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