Gene annotation
Transcriptome id Sobic.001G346200.1
Synonym Sb01g033200
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5WXK7
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G20870 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os03g27980.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a052143
Brachypodium KQK21370
Barley HORVU5Hr1G000110.4 , HORVU5Hr1G000110.3 , HORVU5Hr1G000110.2
Wheat TraesCS5D02G001100 , TraesCS3A02G499400 , TraesCS5B02G557700 , TraesCSU02G136400 , TraesCSU02G142700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G124700 lectin-like receptor kinase, putative, expressed -
2 Sobic.003G353900 - -
3 Sobic.009G182400 circadian clock coupling factor ZGT, putative, expressed -
4 Sobic.003G323400 - -
5 Sobic.002G172000 similar to Os09g0325700 protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
6 Sobic.001G022200 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.006G164500 protein kinase domain containing protein, expressed -
8 Sobic.003G327400 circadian clock coupling factor-related, putative, expressed -
9 Sobic.003G322800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pectate lyase family protein, expressed K01728: pectate lyase
10 Sobic.007G145901 - K02705: photosystem II CP43 chlorophyll apoprotein
11 Sobic.002G379932 - -
12 Sobic.010G182966 - K15639: CYP734A1, PHYB activation tagged suppressor 1
13 Sobic.004G204300 cyclin, putative, expressed K06627: cyclin-A
14 Sobic.009G054450 - -
15 Sobic.K004201 - -
16 Sobic.003G298300 expressed protein -
17 Sobic.001G150066 - -
18 Sobic.010G026850 - -
19 Sobic.001G062066 - -
20 Sobic.005G139600 Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic001G346200 Sobic001G346200 Sobic010G124700 Sobic010G124700 Sobic001G346200--Sobic010G124700 Sobic003G353900 Sobic003G353900 Sobic001G346200--Sobic003G353900 Sobic009G182400 Sobic009G182400 Sobic001G346200--Sobic009G182400 Sobic003G323400 Sobic003G323400 Sobic001G346200--Sobic003G323400 Sobic002G172000 Sobic002G172000 Sobic001G346200--Sobic002G172000 Sobic001G022200 Sobic001G022200 Sobic001G346200--Sobic001G022200 Sobic006G164500 Sobic006G164500 Sobic001G346200--Sobic006G164500 Sobic003G327400 Sobic003G327400 Sobic001G346200--Sobic003G327400 Sobic003G322800 Sobic003G322800 Sobic001G346200--Sobic003G322800 Sobic007G145901 Sobic007G145901 Sobic010G124700--Sobic007G145901 Sobic003G311100 Sobic003G311100 Sobic010G124700--Sobic003G311100 Sobic009G087360 Sobic009G087360 Sobic010G124700--Sobic009G087360 SobicK004201 SobicK004201 Sobic010G124700--SobicK004201 Sobic003G024450 Sobic003G024450 Sobic010G124700--Sobic003G024450 Sobic010G023132 Sobic010G023132 Sobic010G124700--Sobic010G023132 Sobic006G128233 Sobic006G128233 Sobic010G124700--Sobic006G128233 Sobic006G192150 Sobic006G192150 Sobic010G124700--Sobic006G192150 Sobic008G133750 Sobic008G133750 Sobic010G124700--Sobic008G133750 Sobic003G061850 Sobic003G061850 Sobic003G353900--Sobic003G061850 Sobic005G019000 Sobic005G019000 Sobic003G353900--Sobic005G019000 Sobic009G248200 Sobic009G248200 Sobic003G353900--Sobic009G248200 Sobic004G161850 Sobic004G161850 Sobic003G353900--Sobic004G161850 Sobic004G193100 Sobic004G193100 Sobic003G353900--Sobic004G193100 Sobic010G094200 Sobic010G094200 Sobic003G353900--Sobic010G094200 Sobic001G210101 Sobic001G210101 Sobic003G353900--Sobic001G210101 Sobic002G025200 Sobic002G025200 Sobic003G353900--Sobic002G025200 Sobic001G509901 Sobic001G509901 Sobic003G353900--Sobic001G509901 Sobic010G231900 Sobic010G231900 Sobic009G182400--Sobic010G231900 Sobic009G161800 Sobic009G161800 Sobic009G182400--Sobic009G161800 Sobic001G155300 Sobic001G155300 Sobic009G182400--Sobic001G155300 Sobic004G283550 Sobic004G283550 Sobic009G182400--Sobic004G283550 Sobic003G422200 Sobic003G422200 Sobic009G182400--Sobic003G422200 Sobic004G309600 Sobic004G309600 Sobic009G182400--Sobic004G309600 Sobic009G064400 Sobic009G064400 Sobic009G182400--Sobic009G064400 Sobic003G064300 Sobic003G064300 Sobic009G182400--Sobic003G064300 Sobic007G143100 Sobic007G143100 Sobic009G182400--Sobic007G143100 Sobic008G110151 Sobic008G110151 Sobic003G323400--Sobic008G110151 Sobic007G191150 Sobic007G191150 Sobic003G323400--Sobic007G191150 Sobic003G244401 Sobic003G244401 Sobic003G323400--Sobic003G244401 Sobic007G121800 Sobic007G121800 Sobic003G323400--Sobic007G121800 Sobic010G263151 Sobic010G263151 Sobic003G323400--Sobic010G263151 Sobic003G267400 Sobic003G267400 Sobic003G323400--Sobic003G267400 Sobic003G008400 Sobic003G008400 Sobic003G323400--Sobic003G008400 Sobic003G254400 Sobic003G254400 Sobic003G323400--Sobic003G254400 Sobic001G209000 Sobic001G209000 Sobic003G323400--Sobic001G209000 Sobic002G038733 Sobic002G038733 Sobic002G172000--Sobic002G038733 Sobic004G219700 Sobic004G219700 Sobic002G172000--Sobic004G219700 Sobic002G172000--Sobic010G231900 Sobic007G013800 Sobic007G013800 Sobic002G172000--Sobic007G013800 Sobic010G245900 Sobic010G245900 Sobic002G172000--Sobic010G245900 Sobic010G146500 Sobic010G146500 Sobic002G172000--Sobic010G146500 Sobic008G087500 Sobic008G087500 Sobic002G172000--Sobic008G087500 Sobic008G087800 Sobic008G087800 Sobic002G172000--Sobic008G087800 Sobic008G186300 Sobic008G186300 Sobic002G172000--Sobic008G186300 Sobic004G248300 Sobic004G248300 Sobic001G022200--Sobic004G248300 Sobic003G409500 Sobic003G409500 Sobic001G022200--Sobic003G409500 Sobic001G073400 Sobic001G073400 Sobic001G022200--Sobic001G073400 Sobic002G325200 Sobic002G325200 Sobic001G022200--Sobic002G325200 Sobic005G139600 Sobic005G139600 Sobic001G022200--Sobic005G139600 Sobic005G100500 Sobic005G100500 Sobic001G022200--Sobic005G100500 Sobic001G395600 Sobic001G395600 Sobic001G022200--Sobic001G395600 Sobic003G298300 Sobic003G298300 Sobic001G022200--Sobic003G298300 Sobic001G201933 Sobic001G201933 Sobic001G022200--Sobic001G201933 Sobic003G358100 Sobic003G358100 Sobic006G164500--Sobic003G358100 Sobic002G024300 Sobic002G024300 Sobic006G164500--Sobic002G024300 Sobic003G097000 Sobic003G097000 Sobic006G164500--Sobic003G097000 Sobic004G304550 Sobic004G304550 Sobic006G164500--Sobic004G304550 Sobic006G272000 Sobic006G272000 Sobic006G164500--Sobic006G272000 Sobic010G091100 Sobic010G091100 Sobic006G164500--Sobic010G091100 Sobic002G249700 Sobic002G249700 Sobic006G164500--Sobic002G249700 Sobic002G224900 Sobic002G224900 Sobic006G164500--Sobic002G224900 Sobic006G233800 Sobic006G233800 Sobic006G164500--Sobic006G233800 Sobic008G114800 Sobic008G114800 Sobic003G327400--Sobic008G114800 Sobic007G194900 Sobic007G194900 Sobic003G327400--Sobic007G194900 Sobic004G142500 Sobic004G142500 Sobic003G327400--Sobic004G142500 Sobic001G463450 Sobic001G463450 Sobic003G327400--Sobic001G463450 Sobic007G010100 Sobic007G010100 Sobic003G322800--Sobic007G010100 Sobic005G028500 Sobic005G028500 Sobic003G322800--Sobic005G028500 Sobic006G094800 Sobic006G094800 Sobic003G322800--Sobic006G094800 Sobic003G401300 Sobic003G401300 Sobic003G322800--Sobic003G401300 Sobic001G454700 Sobic001G454700 Sobic003G322800--Sobic001G454700 Sobic004G078200 Sobic004G078200 Sobic003G322800--Sobic004G078200 Sobic004G337850 Sobic004G337850 Sobic003G322800--Sobic004G337850 Sobic009G255000 Sobic009G255000 Sobic003G322800--Sobic009G255000 Sobic003G233266 Sobic003G233266 Sobic003G322800--Sobic003G233266
Octagon: transcription factors


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