Gene annotation
Transcriptome id Sobic.003G379301.1
Synonym -
Functional annotation -
UniProt A0A1B6Q7E4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G379400 PHD-finger domain containing protein, putative -
2 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
3 Sobic.001G062900 peptidase, putative, expressed K01301: N-acetylated-alpha-linked acidic dipeptidase
4 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
5 Sobic.010G125833 - -
6 Sobic.005G001700 mitochondrial substrate carrier family protein, putative, expressed -
7 Sobic.001G521200 expressed protein -
8 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
9 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
10 Sobic.002G232200 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
11 Sobic.005G118400 expressed protein -
12 Sobic.002G324400 PPDK-RP(PubMedID : 19549309)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
13 Sobic.001G540600 expressed protein -
14 Sobic.003G434800 PPR repeat domain containing protein, putative, expressed -
15 Sobic.006G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed -
16 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
17 Sobic.010G125866 - -
18 Sobic.002G220900 expressed protein -
19 Sobic.010G009466 - -
20 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase


Gene co-expression network
sample Sobic003G379301 Sobic003G379301 Sobic003G379400 Sobic003G379400 Sobic003G379301--Sobic003G379400 Sobic002G402700 Sobic002G402700 Sobic003G379301--Sobic002G402700 Sobic001G062900 Sobic001G062900 Sobic003G379301--Sobic001G062900 Sobic004G179400 Sobic004G179400 Sobic003G379301--Sobic004G179400 Sobic010G125833 Sobic010G125833 Sobic003G379301--Sobic010G125833 Sobic005G001700 Sobic005G001700 Sobic003G379301--Sobic005G001700 Sobic001G521200 Sobic001G521200 Sobic003G379301--Sobic001G521200 Sobic006G093100 Sobic006G093100 Sobic003G379301--Sobic006G093100 Sobic007G133000 Sobic007G133000 Sobic003G379301--Sobic007G133000 Sobic003G379400--Sobic003G379301 Sobic003G434800 Sobic003G434800 Sobic003G379400--Sobic003G434800 Sobic003G354300 Sobic003G354300 Sobic003G379400--Sobic003G354300 Sobic003G161100 Sobic003G161100 Sobic003G379400--Sobic003G161100 Sobic004G099800 Sobic004G099800 Sobic003G379400--Sobic004G099800 Sobic003G332700 Sobic003G332700 Sobic003G379400--Sobic003G332700 Sobic007G192600 Sobic007G192600 Sobic003G379400--Sobic007G192600 Sobic003G292500 Sobic003G292500 Sobic003G379400--Sobic003G292500 Sobic001G530900 Sobic001G530900 Sobic003G379400--Sobic001G530900 Sobic008G033000 Sobic008G033000 Sobic002G402700--Sobic008G033000 Sobic008G129900 Sobic008G129900 Sobic002G402700--Sobic008G129900 Sobic001G217900 Sobic001G217900 Sobic002G402700--Sobic001G217900 Sobic002G206300 Sobic002G206300 Sobic002G402700--Sobic002G206300 Sobic001G504400 Sobic001G504400 Sobic002G402700--Sobic001G504400 Sobic002G402700--Sobic005G001700 Sobic001G540600 Sobic001G540600 Sobic002G402700--Sobic001G540600 Sobic010G231300 Sobic010G231300 Sobic002G402700--Sobic010G231300 Sobic001G378100 Sobic001G378100 Sobic002G402700--Sobic001G378100 Sobic007G090403 Sobic007G090403 Sobic001G062900--Sobic007G090403 Sobic003G342100 Sobic003G342100 Sobic001G062900--Sobic003G342100 Sobic009G215500 Sobic009G215500 Sobic001G062900--Sobic009G215500 Sobic001G073900 Sobic001G073900 Sobic001G062900--Sobic001G073900 Sobic001G062900--Sobic001G530900 Sobic001G531500 Sobic001G531500 Sobic001G062900--Sobic001G531500 Sobic001G062900--Sobic003G332700 Sobic001G105200 Sobic001G105200 Sobic001G062900--Sobic001G105200 Sobic001G062900--Sobic005G001700 Sobic004G179400--Sobic001G540600 Sobic001G060500 Sobic001G060500 Sobic004G179400--Sobic001G060500 Sobic009G207900 Sobic009G207900 Sobic004G179400--Sobic009G207900 Sobic002G028400 Sobic002G028400 Sobic004G179400--Sobic002G028400 Sobic008G074000 Sobic008G074000 Sobic004G179400--Sobic008G074000 Sobic003G125900 Sobic003G125900 Sobic004G179400--Sobic003G125900 Sobic004G179400--Sobic001G378100 Sobic009G170200 Sobic009G170200 Sobic004G179400--Sobic009G170200 Sobic004G179400--Sobic001G504400 Sobic009G038701 Sobic009G038701 Sobic010G125833--Sobic009G038701 Sobic010G125833--Sobic001G504400 Sobic010G125833--Sobic002G206300 Sobic010G125833--Sobic008G033000 Sobic002G198300 Sobic002G198300 Sobic010G125833--Sobic002G198300 Sobic003G185900 Sobic003G185900 Sobic010G125833--Sobic003G185900 Sobic010G125833--Sobic008G129900 Sobic002G298800 Sobic002G298800 Sobic010G125833--Sobic002G298800 Sobic001G180200 Sobic001G180200 Sobic010G125833--Sobic001G180200 Sobic008G001900 Sobic008G001900 Sobic005G001700--Sobic008G001900 Sobic002G220900 Sobic002G220900 Sobic005G001700--Sobic002G220900 Sobic005G204200 Sobic005G204200 Sobic005G001700--Sobic005G204200 Sobic010G067100 Sobic010G067100 Sobic005G001700--Sobic010G067100 Sobic005G063000 Sobic005G063000 Sobic005G001700--Sobic005G063000 Sobic005G001700--Sobic003G185900 Sobic005G001700--Sobic002G402700 Sobic003G036200 Sobic003G036200 Sobic005G001700--Sobic003G036200 Sobic007G009200 Sobic007G009200 Sobic005G001700--Sobic007G009200 Sobic001G183000 Sobic001G183000 Sobic001G521200--Sobic001G183000 Sobic008G006100 Sobic008G006100 Sobic001G521200--Sobic008G006100 Sobic003G037300 Sobic003G037300 Sobic001G521200--Sobic003G037300 Sobic003G233700 Sobic003G233700 Sobic001G521200--Sobic003G233700 Sobic001G521200--Sobic002G402700 Sobic004G006400 Sobic004G006400 Sobic001G521200--Sobic004G006400 Sobic002G133900 Sobic002G133900 Sobic001G521200--Sobic002G133900 Sobic005G100300 Sobic005G100300 Sobic001G521200--Sobic005G100300 Sobic009G062400 Sobic009G062400 Sobic001G521200--Sobic009G062400 Sobic004G215800 Sobic004G215800 Sobic006G093100--Sobic004G215800 Sobic002G390100 Sobic002G390100 Sobic006G093100--Sobic002G390100 Sobic006G093100--Sobic003G036200 Sobic002G196600 Sobic002G196600 Sobic006G093100--Sobic002G196600 Sobic007G105500 Sobic007G105500 Sobic006G093100--Sobic007G105500 Sobic008G033200 Sobic008G033200 Sobic006G093100--Sobic008G033200 Sobic003G042900 Sobic003G042900 Sobic006G093100--Sobic003G042900 Sobic006G093100--Sobic008G033000 Sobic002G404800 Sobic002G404800 Sobic006G093100--Sobic002G404800 Sobic007G133000--Sobic010G231300 Sobic007G133000--Sobic001G217900 Sobic001G263100 Sobic001G263100 Sobic007G133000--Sobic001G263100 Sobic007G133000--Sobic010G125833 Sobic005G068700 Sobic005G068700 Sobic007G133000--Sobic005G068700 Sobic007G133000--Sobic001G540600 Sobic007G133000--Sobic002G206300 Sobic007G133000--Sobic001G180200 Sobic006G235400 Sobic006G235400 Sobic007G133000--Sobic006G235400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.